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Cow genome map

           
Conread name:
           
rspl22_e17.y1
        

               
Conread position:
               
1-234
               

               
Cow position:
               
chr20:18356079-18356306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr20:22696205-22695971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr20:22210698-22210953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr20:29313654-29313956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
236, 102
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr20:27345134-27344783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr20:12693889-12694259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr20:23801751-23802103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr20:28163892-28164254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 31
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr20:37270934-37271299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 99
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr20:42085381-42085746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr20:35144055-35143686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr20:35131858-35132226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 101
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr20:15093725-15093324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 85
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr20:37169379-37168931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr20:34459464-34459021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr20:13575869-13575385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 108
               

               
Conread position:
               
1-498
               

               
Cow position:
               
chr20:31785525-31785020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr20:12047358-12047854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 54
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr20:16944367-16944862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 10
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr20:35159732-35159220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 85
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr20:14867535-14867018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr20:14741045-14741561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr20:25845776-25845250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
1-527
               

               
Cow position:
               
chr20:23805029-23804489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 50
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr20:35019766-35020312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr20:38956986-38957550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr20:14930101-14930644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr20:28294161-28294737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 31
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr20:30431119-30431686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr20:21016159-21015576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:753286-753862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:825628-826201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:3808921-3808352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:6136141-6135570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:6476366-6476928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:7598009-7597436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:7810986-7810421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:10922073-10921505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:12332536-12333101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 101
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:12435547-12434979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:12568462-12567895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:13506710-13506141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:13765741-13766312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:14925794-14925221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:15090527-15089951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:15294886-15295439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:16515205-16515744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 97
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:17658384-17657811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:18093051-18092480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 74
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:20731112-20731679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:22061329-22060756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:22208470-22209042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:27876330-27876907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:28561036-28560473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:28724605-28725181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 78
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:30688723-30689295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr20:31220158-31220700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr20:42923406-42923765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
2-547
               

               
Cow position:
               
chr20:28035005-28034455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 65
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr20:7513078-7512515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 28
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr20:10494052-10494612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 55
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr20:13954482-13955042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 30
               

               
Conread position:
               
3-290
               

               
Cow position:
               
chr20:22186283-22185998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr20:2653979-2654278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
3-313
               

               
Cow position:
               
chr20:9587615-9587924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
3-562
               

               
Cow position:
               
chr20:36418866-36418309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 99
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr20:23466799-23466228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 21
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr20:34967833-34968404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 83
               

               
Conread position:
               
5-570
               

               
Cow position:
               
chr20:14757405-14756844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
6-367
               

               
Cow position:
               
chr20:5076840-5077199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
6-512
               

               
Cow position:
               
chr20:7569111-7568591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 25
               

               
Conread position:
               
6-512
               

               
Cow position:
               
chr20:7593599-7593078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 25
               

               
Conread position:
               
6-570
               

               
Cow position:
               
chr20:14511563-14512116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
7-210
               

               
Cow position:
               
chr20:29758121-29758318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
7-249
               

               
Cow position:
               
chr20:31080229-31080466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr20:5270315-5270079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
237, 93
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr20:30776572-30776893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
162, 79
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr20:16189887-16189529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr20:35108333-35107975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-442
               

               
Cow position:
               
chr20:24542280-24542731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr20:19306531-19306064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-458
               

               
Cow position:
               
chr20:33598110-33597643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 91
               

               
Conread position:
               
7-483
               

               
Cow position:
               
chr20:35127525-35128015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-556
               

               
Cow position:
               
chr20:39234085-39234638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:5086483-5085916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:8098642-8099203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 77
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:8971037-8970472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:16106300-16106869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 81
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:16559687-16559111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:19440769-19441340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 80
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:24568415-24567851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:28444494-28443928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 93
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr20:30385392-30384824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 100
               

               
Conread position:
               
8-523
               

               
Cow position:
               
chr20:15241154-15240649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 96
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chr20:34642865-34643404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 78
               

               
Conread position:
               
11-446
               

               
Cow position:
               
chr20:13062696-13063170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 215
               

               
Conread position:
               
11-508
               

               
Cow position:
               
chr20:3509745-3510227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
12-570
               

               
Cow position:
               
chr20:9338881-9339434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 74
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr20:32125731-32125527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
15-570
               

               
Cow position:
               
chr20:15116677-15117221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 22
               

               
Conread position:
               
16-570
               

               
Cow position:
               
chr20:21719421-21719977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 70
               

               
Conread position:
               
18-570
               

               
Cow position:
               
chr20:24400000-24399444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 68
               

               
Conread position:
               
20-570
               

               
Cow position:
               
chr20:6259433-6258871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 454
               

               
Conread position:
               
21-366
               

               
Cow position:
               
chr20:23393144-23392800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 65
               

               
Conread position:
               
21-571
               

               
Cow position:
               
chr20:19844647-19845197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 65
               

               
Conread position:
               
22-512
               

               
Cow position:
               
chr20:33181617-33181123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr20:33296075-33295756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 39
               

               
Conread position:
               
24-571
               

               
Cow position:
               
chr20:31846961-31846406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
26-512
               

               
Cow position:
               
chr20:5538055-5538547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 72
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr20:1743875-1744187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
15, 53
               

               
Conread position:
               
28-570
               

               
Cow position:
               
chr20:14721500-14720936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 70
               

               
Conread position:
               
32-427
               

               
Cow position:
               
chr20:39067570-39067179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
212, 51
               

               
Conread position:
               
34-340
               

               
Cow position:
               
chr20:6018651-6018342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
205, 69
               

               
Conread position:
               
38-570
               

               
Cow position:
               
chr20:10035840-10035325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
38-570
               

               
Cow position:
               
chr20:18489832-18490374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 62
               

               
Conread position:
               
40-512
               

               
Cow position:
               
chr20:13654438-13653959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 68
               

               
Conread position:
               
43-366
               

               
Cow position:
               
chr20:11719668-11719989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
45-572
               

               
Cow position:
               
chr20:5794666-5795197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
47-570
               

               
Cow position:
               
chr20:21397704-21398238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
55-363
               

               
Cow position:
               
chr20:40007753-40007446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 31
               

               
Conread position:
               
65-481
               

               
Cow position:
               
chr20:26800372-26799940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
67-570
               

               
Cow position:
               
chr20:30578777-30579284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr20:10404637-10405115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 154
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr20:20440035-20439548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 434
               

               
Conread position:
               
96-502
               

               
Cow position:
               
chr20:6240196-6239770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 94
               

               
Conread position:
               
109-570
               

               
Cow position:
               
chr20:8445361-8445833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 318
               

               
Conread position:
               
111-570
               

               
Cow position:
               
chr20:31504282-31504754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 419
               

               
Conread position:
               
118-570
               

               
Cow position:
               
chr20:9996491-9996957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 382
               

               
Conread position:
               
125-512
               

               
Cow position:
               
chr20:30146401-30146810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
130-516
               

               
Cow position:
               
chr20:15067787-15068194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
131-512
               

               
Cow position:
               
chr20:30737259-30737649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 80
               

               
Conread position:
               
131-570
               

               
Cow position:
               
chr20:20092271-20092721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 396
               

               
Conread position:
               
131-570
               

               
Cow position:
               
chr20:22048340-22048787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 6
               

               
Conread position:
               
132-568
               

               
Cow position:
               
chr20:35844459-35844009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
143-512
               

               
Cow position:
               
chr20:28247266-28246877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 378
               

               
Conread position:
               
154-503
               

               
Cow position:
               
chr20:13325105-13325476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 284
               

               
Conread position:
               
154-570
               

               
Cow position:
               
chr20:5503752-5503326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 373
               

               
Conread position:
               
157-570
               

               
Cow position:
               
chr20:10790454-10790875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 325
               

               
Conread position:
               
158-569
               

               
Cow position:
               
chr20:28887375-28887793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 308
               

               
Conread position:
               
166-570
               

               
Cow position:
               
chr20:10685749-10686150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
166-570
               

               
Cow position:
               
chr20:12997260-12996822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 90
               

               
Conread position:
               
172-570
               

               
Cow position:
               
chr20:774671-775079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 355
               

               
Conread position:
               
179-570
               

               
Cow position:
               
chr20:15526765-15527166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 349
               

               
Conread position:
               
181-571
               

               
Cow position:
               
chr20:19018382-19017989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 282
               

               
Conread position:
               
190-570
               

               
Cow position:
               
chr20:32165068-32164683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 145
               

               
Conread position:
               
194-570
               

               
Cow position:
               
chr20:6550963-6550577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 332
               

               
Conread position:
               
201-570
               

               
Cow position:
               
chr20:30479151-30479530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
208-570
               

               
Cow position:
               
chr20:38000539-38000909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 256
               

               
Conread position:
               
212-568
               

               
Cow position:
               
chr20:29371365-29371002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
225-570
               

               
Cow position:
               
chr20:11516973-11516614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 178
               

               
Conread position:
               
227-512
               

               
Cow position:
               
chr20:32639077-32639386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
228-570
               

               
Cow position:
               
chr20:40255725-40256083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
16, 267
               

               
Conread position:
               
233-570
               

               
Cow position:
               
chr20:5269954-5269613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
11, 61
               

               
Conread position:
               
235-556
               

               
Cow position:
               
chr20:22185934-22185607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
243-502
               

               
Cow position:
               
chr20:9535990-9536266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 246
               

               
Conread position:
               
245-469
               

               
Cow position:
               
chr20:9007709-9007485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
249-570
               

               
Cow position:
               
chr20:41111324-41111002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
257-568
               

               
Cow position:
               
chr20:29806838-29806515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 204
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr20:9222973-9223273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
82, 247
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr20:13304177-13303877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
82, 247
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr20:26053232-26052932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
82, 247
               

               
Conread position:
               
283-570
               

               
Cow position:
               
chr20:12177361-12177069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 239
               

               
Conread position:
               
283-570
               

               
Cow position:
               
chr20:15781056-15780776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 221
               

               
Conread position:
               
285-570
               

               
Cow position:
               
chr20:26737908-26738198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
72, 237
               

               
Conread position:
               
293-561
               

               
Cow position:
               
chr20:22222465-22222192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 19
               

               
Conread position:
               
331-570
               

               
Cow position:
               
chr20:13050361-13050135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
365-502
               

               
Cow position:
               
chr20:33247077-33246940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-512
               

               
Cow position:
               
chr20:28282297-28282441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
365-516
               

               
Cow position:
               
chr20:30816605-30816454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
365-524
               

               
Cow position:
               
chr20:20935902-20935743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
143, 44
               

               
Conread position:
               
365-569
               

               
Cow position:
               
chr20:26999724-26999915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
104, 63
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr20:7995315-7995122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr20:11331446-11331253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr20:19352842-19352648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
101, 124
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr20:23802378-23802571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr20:37271499-37271691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr20:6500448-6500298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
366-570
               

               
Cow position:
               
chr20:5958916-5958724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
366-570
               

               
Cow position:
               
chr20:35112260-35112451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
368-570
               

               
Cow position:
               
chr20:28165079-28165263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
369-570
               

               
Cow position:
               
chr20:33730988-33731174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
376-570
               

               
Cow position:
               
chr20:17667980-17668161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
377-571
               

               
Cow position:
               
chr20:26075797-26075979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
383-501
               

               
Cow position:
               
chr20:6055478-6055360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
483-570
               

               
Cow position:
               
chr20:31000531-31000619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               
Show alignments to all cow chromosomes.