Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-107
Cow position:
Alignm length: 107
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-145
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 123, 85

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 204, 98

Conread position: 1-240
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 0

Conread position: 1-304
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 61, 37

Conread position: 1-331
Cow position:
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 56

Conread position: 1-342
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 1-347
Cow position:
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 50

Conread position: 1-357
Cow position:
Alignm length: 363
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-359
Cow position:
Alignm length: 364
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 102

Conread position: 1-361
Cow position:
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 17

Conread position: 1-365
Cow position:
Alignm length: 381
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 23

Conread position: 1-366
Cow position:
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-373
Cow position:
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-511
Cow position:
Alignm length: 533
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position:
Alignm length: 544
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 1-512
Cow position:
Alignm length: 536
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 102

Conread position: 1-556
Cow position:
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 99

Conread position: 1-561
Cow position:
Alignm length: 582
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-561
Cow position:
Alignm length: 584
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 1-561
Cow position:
Alignm length: 583
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 93

Conread position: 1-561
Cow position:
Alignm length: 586
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 85

Conread position: 1-562
Cow position:
Alignm length: 584
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-568
Cow position:
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 62

Conread position: 1-568
Cow position:
Alignm length: 593
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-570
Cow position:
Alignm length: 588
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 586
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 590
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 85

Conread position: 1-570
Cow position:
Alignm length: 574
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 53

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 85

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 63

Conread position: 1-570
Cow position:
Alignm length: 599
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 85

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 594
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 31

Conread position: 2-347
Cow position:
Alignm length: 352
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 100

Conread position: 2-358
Cow position:
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 98

Conread position: 2-502
Cow position:
Alignm length: 521
Alignm identity: 337
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 242, 73

Conread position: 2-514
Cow position:
Alignm length: 540
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 325, 49

Conread position: 2-564
Cow position:
Alignm length: 585
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 84

Conread position: 2-570
Cow position:
Alignm length: 586
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 70

Conread position: 2-570
Cow position:
Alignm length: 591
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 84

Conread position: 3-525
Cow position:
Alignm length: 551
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 47

Conread position: 3-561
Cow position:
Alignm length: 582
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 83

Conread position: 3-570
Cow position:
Alignm length: 598
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 526

Conread position: 5-343
Cow position:
Alignm length: 343
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 62

Conread position: 5-352
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 52

Conread position: 7-366
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-481
Cow position:
Alignm length: 497
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position:
Alignm length: 580
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 91

Conread position: 8-502
Cow position:
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 89

Conread position: 13-553
Cow position:
Alignm length: 546
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 88

Conread position: 14-184
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 92

Conread position: 15-558
Cow position:
Alignm length: 554
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 86

Conread position: 16-174
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 16-210
Cow position:
Alignm length: 196
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 168, 30

Conread position: 19-528
Cow position:
Alignm length: 541
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 22

Conread position: 21-350
Cow position:
Alignm length: 340
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 23, 10

Conread position: 21-570
Cow position:
Alignm length: 574
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 65

Conread position: 22-569
Cow position:
Alignm length: 570
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 83

Conread position: 27-170
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 28-570
Cow position:
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 59

Conread position: 38-525
Cow position:
Alignm length: 512
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 62

Conread position: 47-570
Cow position:
Alignm length: 546
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 39

Conread position: 49-366
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 57-570
Cow position:
Alignm length: 531
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 41

Conread position: 60-570
Cow position:
Alignm length: 533
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 40

Conread position: 65-570
Cow position:
Alignm length: 524
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 36

Conread position: 91-570
Cow position:
Alignm length: 503
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 131

Conread position: 94-512
Cow position:
Alignm length: 427
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 0

Conread position: 94-570
Cow position:
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 432

Conread position: 94-570
Cow position:
Alignm length: 499
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 371

Conread position: 129-564
Cow position:
Alignm length: 455
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 319

Conread position: 131-570
Cow position:
Alignm length: 463
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 386

Conread position: 143-570
Cow position:
Alignm length: 450
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 27

Conread position: 151-570
Cow position:
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 351

Conread position: 161-570
Cow position:
Alignm length: 432
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 26

Conread position: 164-570
Cow position:
Alignm length: 430
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 363

Conread position: 164-570
Cow position:
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 166-512
Cow position:
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 0

Conread position: 176-570
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 289

Conread position: 178-529
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 149

Conread position: 181-570
Cow position:
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 7

Conread position: 187-570
Cow position:
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 276

Conread position: 196-570
Cow position:
Alignm length: 397
Alignm identity: 276
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 48, 19

Conread position: 205-570
Cow position:
Alignm length: 388
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 322

Conread position: 206-570
Cow position:
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 153

Conread position: 212-570
Cow position:
Alignm length: 381
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 315

Conread position: 243-561
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 164

Conread position: 243-570
Cow position:
Alignm length: 349
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 283

Conread position: 244-570
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 187

Conread position: 248-512
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 90

Conread position: 251-570
Cow position:
Alignm length: 341
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 7

Conread position: 254-512
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 59

Conread position: 266-508
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 91, 0

Conread position: 275-570
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 82, 212

Conread position: 293-569
Cow position:
Alignm length: 284
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 219

Conread position: 295-570
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 216

Conread position: 297-570
Cow position:
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 166

Conread position: 300-570
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 219

Conread position: 345-561
Cow position:
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 15, 164

Conread position: 346-502
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 348-570
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 13

Conread position: 362-570
Cow position:
Alignm length: 209
Alignm identity: 163
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 122, 0

Conread position: 364-512
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 365-502
Cow position:
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 365-512
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 129, 54

Conread position: 365-512
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 365-520
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 110, 0

Conread position: 365-561
Cow position:
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-562
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 365-570
Cow position:
Alignm length: 207
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 175, 140

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 139, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 54, 127

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 129, 0

Conread position: 365-570
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 142, 11

Conread position: 365-570
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 11

Conread position: 365-571
Cow position:
Alignm length: 207
Alignm identity: 159
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 366-569
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 128, 0

Conread position: 366-570
Cow position:
Alignm length: 205
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 367-570
Cow position:
Alignm length: 204
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 368-570
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 107, 139

Conread position: 369-570
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 372-570
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 386-561
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 392-502
Cow position:
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Show alignments to all cow chromosomes.