Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-134
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 1-170
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 1-218
Cow position:
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-235
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-260
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 38, 55

Conread position: 1-260
Cow position:
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-269
Cow position:
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-329
Cow position:
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-329
Cow position:
Alignm length: 334
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-339
Cow position:
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 100

Conread position: 1-366
Cow position:
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-366
Cow position:
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-367
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 1-416
Cow position:
Alignm length: 422
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-429
Cow position:
Alignm length: 444
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 1-509
Cow position:
Alignm length: 531
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 99

Conread position: 1-511
Cow position:
Alignm length: 533
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position:
Alignm length: 548
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 85

Conread position: 1-512
Cow position:
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 104

Conread position: 1-512
Cow position:
Alignm length: 534
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 1-512
Cow position:
Alignm length: 537
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 86

Conread position: 1-512
Cow position:
Alignm length: 530
Alignm identity: 342
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 168, 56

Conread position: 1-512
Cow position:
Alignm length: 535
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position:
Alignm length: 539
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 153

Conread position: 1-512
Cow position:
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-547
Cow position:
Alignm length: 570
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 27

Conread position: 1-561
Cow position:
Alignm length: 584
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-565
Cow position:
Alignm length: 587
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 591
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 85

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 84

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 586
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 29

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 50

Conread position: 1-570
Cow position:
Alignm length: 591
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 85

Conread position: 1-570
Cow position:
Alignm length: 596
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 78

Conread position: 1-570
Cow position:
Alignm length: 598
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 32

Conread position: 1-570
Cow position:
Alignm length: 594
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 31

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-570
Cow position:
Alignm length: 594
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-570
Cow position:
Alignm length: 595
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 43

Conread position: 1-571
Cow position:
Alignm length: 596
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 31

Conread position: 1-571
Cow position:
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 2-570
Cow position:
Alignm length: 591
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 56

Conread position: 3-436
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 31

Conread position: 3-512
Cow position:
Alignm length: 525
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 7-203
Cow position:
Alignm length: 197
Alignm identity: 116
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 7-231
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 7-307
Cow position:
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 79

Conread position: 7-361
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position:
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-451
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 67

Conread position: 7-468
Cow position:
Alignm length: 471
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 94

Conread position: 7-512
Cow position:
Alignm length: 528
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 78

Conread position: 7-524
Cow position:
Alignm length: 544
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 50

Conread position: 7-561
Cow position:
Alignm length: 573
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 91

Conread position: 8-201
Cow position:
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 10-366
Cow position:
Alignm length: 364
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 88

Conread position: 11-512
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 90

Conread position: 11-570
Cow position:
Alignm length: 582
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 75

Conread position: 16-506
Cow position:
Alignm length: 519
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 16

Conread position: 24-570
Cow position:
Alignm length: 569
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 63

Conread position: 35-365
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 65

Conread position: 38-570
Cow position:
Alignm length: 543
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 63

Conread position: 39-570
Cow position:
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 59

Conread position: 40-440
Cow position:
Alignm length: 410
Alignm identity: 254
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 107

Conread position: 46-367
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 161, 55

Conread position: 55-564
Cow position:
Alignm length: 529
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 45

Conread position: 59-570
Cow position:
Alignm length: 534
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 27

Conread position: 81-570
Cow position:
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 436

Conread position: 94-570
Cow position:
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 431

Conread position: 116-570
Cow position:
Alignm length: 461
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 21

Conread position: 138-570
Cow position:
Alignm length: 460
Alignm identity: 326
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 102, 40

Conread position: 141-512
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 139

Conread position: 141-570
Cow position:
Alignm length: 440
Alignm identity: 290
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 14, 125

Conread position: 152-570
Cow position:
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 7

Conread position: 154-570
Cow position:
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 68

Conread position: 160-569
Cow position:
Alignm length: 431
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 161-570
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 366

Conread position: 179-570
Cow position:
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 348

Conread position: 181-570
Cow position:
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 346

Conread position: 181-570
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 346

Conread position: 183-512
Cow position:
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 5

Conread position: 196-445
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 140

Conread position: 197-496
Cow position:
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 131

Conread position: 206-502
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 38, 90

Conread position: 212-570
Cow position:
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 98

Conread position: 227-568
Cow position:
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 238

Conread position: 251-570
Cow position:
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 7

Conread position: 258-570
Cow position:
Alignm length: 334
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 268

Conread position: 258-570
Cow position:
Alignm length: 327
Alignm identity: 232
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 208

Conread position: 275-569
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 53, 248

Conread position: 275-570
Cow position:
Alignm length: 313
Alignm identity: 230
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 82, 19

Conread position: 276-430
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 276-570
Cow position:
Alignm length: 311
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 81, 12

Conread position: 282-502
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 11

Conread position: 293-570
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 217

Conread position: 297-570
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 206

Conread position: 298-570
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 59, 98

Conread position: 313-570
Cow position:
Alignm length: 275
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 198

Conread position: 361-570
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 0

Conread position: 362-570
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 363-511
Cow position:
Alignm length: 149
Alignm identity: 120
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 365-496
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 365-522
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 154, 63

Conread position: 365-554
Cow position:
Alignm length: 190
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 365-559
Cow position:
Alignm length: 195
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 0

Conread position: 365-570
Cow position:
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 9, 154

Conread position: 365-570
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 100

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 365-570
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 183, 140

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 130

Conread position: 365-570
Cow position:
Alignm length: 207
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 192, 17

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 366-571
Cow position:
Alignm length: 206
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 367-502
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 367-570
Cow position:
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 101

Conread position: 368-570
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 66

Conread position: 369-501
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 380-570
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 401-570
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 158, 39

Show alignments to all cow chromosomes.