Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 1-174
Cow position:
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 144, 31

Conread position: 1-193
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 14, 72

Conread position: 1-206
Cow position:
Alignm length: 207
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-207
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 87

Conread position: 1-236
Cow position:
Alignm length: 237
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 10

Conread position: 1-251
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-280
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-301
Cow position:
Alignm length: 307
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 22

Conread position: 1-347
Cow position:
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 17

Conread position: 1-347
Cow position:
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 101

Conread position: 1-358
Cow position:
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-366
Cow position:
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-366
Cow position:
Alignm length: 371
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-376
Cow position:
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-436
Cow position:
Alignm length: 443
Alignm identity: 293
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 207, 85

Conread position: 1-500
Cow position:
Alignm length: 526
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 69

Conread position: 1-509
Cow position:
Alignm length: 517
Alignm identity: 318
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 32, 101

Conread position: 1-511
Cow position:
Alignm length: 536
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 103

Conread position: 1-512
Cow position:
Alignm length: 531
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position:
Alignm length: 534
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-514
Cow position:
Alignm length: 534
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-554
Cow position:
Alignm length: 576
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-555
Cow position:
Alignm length: 578
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 86

Conread position: 1-562
Cow position:
Alignm length: 578
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-564
Cow position:
Alignm length: 578
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 96

Conread position: 1-569
Cow position:
Alignm length: 591
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 1-570
Cow position:
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 597
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 31

Conread position: 1-570
Cow position:
Alignm length: 594
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 31

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 1-570
Cow position:
Alignm length: 599
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position:
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 1-570
Cow position:
Alignm length: 597
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 1-570
Cow position:
Alignm length: 587
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 62

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 475

Conread position: 1-570
Cow position:
Alignm length: 592
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 100

Conread position: 1-570
Cow position:
Alignm length: 593
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 80

Conread position: 1-570
Cow position:
Alignm length: 601
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 56

Conread position: 1-570
Cow position:
Alignm length: 584
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 100

Conread position: 1-570
Cow position:
Alignm length: 603
Alignm identity: 389
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 160, 102

Conread position: 1-570
Cow position:
Alignm length: 583
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 2-233
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 61

Conread position: 2-512
Cow position:
Alignm length: 519
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 9

Conread position: 3-366
Cow position:
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 83

Conread position: 3-570
Cow position:
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 8

Conread position: 4-507
Cow position:
Alignm length: 540
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 82

Conread position: 4-570
Cow position:
Alignm length: 591
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 82

Conread position: 5-442
Cow position:
Alignm length: 459
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 26

Conread position: 5-570
Cow position:
Alignm length: 588
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 41

Conread position: 6-461
Cow position:
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 80

Conread position: 7-256
Cow position:
Alignm length: 251
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position:
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-512
Cow position:
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position:
Alignm length: 599
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position:
Alignm length: 593
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 121

Conread position: 7-570
Cow position:
Alignm length: 587
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position:
Alignm length: 591
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 96

Conread position: 16-298
Cow position:
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 16

Conread position: 18-262
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 13, 84

Conread position: 18-529
Cow position:
Alignm length: 536
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 20

Conread position: 21-436
Cow position:
Alignm length: 433
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 81

Conread position: 21-513
Cow position:
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 17

Conread position: 22-564
Cow position:
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 84

Conread position: 23-366
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 63

Conread position: 26-366
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 60

Conread position: 32-339
Cow position:
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 54

Conread position: 40-570
Cow position:
Alignm length: 553
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 46

Conread position: 45-235
Cow position:
Alignm length: 191
Alignm identity: 148
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 0

Conread position: 45-570
Cow position:
Alignm length: 543
Alignm identity: 214
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 312, 476

Conread position: 54-469
Cow position:
Alignm length: 420
Alignm identity: 264
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 192, 50

Conread position: 54-570
Cow position:
Alignm length: 540
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 32

Conread position: 59-470
Cow position:
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 43

Conread position: 67-570
Cow position:
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 80-502
Cow position:
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 94-570
Cow position:
Alignm length: 498
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 145

Conread position: 97-570
Cow position:
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 57

Conread position: 128-570
Cow position:
Alignm length: 465
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 399

Conread position: 138-511
Cow position:
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 143-546
Cow position:
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 175

Conread position: 154-570
Cow position:
Alignm length: 440
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 140

Conread position: 154-570
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 7

Conread position: 163-511
Cow position:
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 103

Conread position: 188-570
Cow position:
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 235

Conread position: 196-557
Cow position:
Alignm length: 384
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 203-570
Cow position:
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 324

Conread position: 203-570
Cow position:
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 335

Conread position: 211-570
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 305

Conread position: 214-570
Cow position:
Alignm length: 380
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 62, 23

Conread position: 221-570
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 305

Conread position: 222-570
Cow position:
Alignm length: 355
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 92

Conread position: 226-512
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 54, 213

Conread position: 243-546
Cow position:
Alignm length: 326
Alignm identity: 222
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 271

Conread position: 244-570
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 282

Conread position: 279-500
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 82, 41

Conread position: 286-570
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 51, 230

Conread position: 290-489
Cow position:
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 67, 7

Conread position: 303-570
Cow position:
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 179

Conread position: 315-564
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 51, 184

Conread position: 362-570
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 365-503
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 365-511
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 365-512
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 365-564
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 44, 65

Conread position: 365-569
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 194, 17

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 123, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 365-570
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 368-570
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 369-506
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 370-570
Cow position:
Alignm length: 201
Alignm identity: 154
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 379-570
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 0

Conread position: 387-570
Cow position:
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 178, 56

Conread position: 392-570
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 155, 82

Show alignments to all cow chromosomes.