Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-170
Cow position: chr29:34331751-34331589 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-174
Cow position: chr29:13019481-13019648 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 1-177
Cow position: chr29:11474993-11475163 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 0

Conread position: 1-184
Cow position: chr29:13899462-13899640 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 86

Conread position: 1-185
Cow position: chr29:3172168-3171991 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 14, 57

Conread position: 1-190
Cow position: chr29:27813205-27813387 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 1-212
Cow position: chr29:13850089-13849883 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 40, 86

Conread position: 1-218
Cow position: chr29:7428319-7428106 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 74, 87

Conread position: 1-223
Cow position: chr29:666611-666395 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 85, 0

Conread position: 1-235
Cow position: chr29:41184220-41183992 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-246
Cow position: chr29:43255610-43255375 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 49, 0

Conread position: 1-274
Cow position: chr29:15623906-15623637 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 87, 61

Conread position: 1-275
Cow position: chr29:6872758-6872488 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 19

Conread position: 1-275
Cow position: chr29:34807336-34807604 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-276
Cow position: chr29:13612056-13611785 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 238, 78

Conread position: 1-304
Cow position: chr29:5426631-5426332 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 86

Conread position: 1-307
Cow position: chr29:16171316-16171001 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 50

Conread position: 1-307
Cow position: chr29:32805371-32805676 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 99

Conread position: 1-308
Cow position: chr29:43728108-43728438 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 14, 25

Conread position: 1-315
Cow position: chr29:9639753-9639444 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 101

Conread position: 1-325
Cow position: chr29:5960632-5960952 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-347
Cow position: chr29:13076184-13076503 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 40, 46

Conread position: 1-347
Cow position: chr29:15995586-15995241 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-348
Cow position: chr29:15687665-15688004 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 50

Conread position: 1-358
Cow position: chr29:14082110-14081752 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 1-366
Cow position: chr29:35299716-35300079 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-369
Cow position: chr29:29600382-29600019 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 244, 103

Conread position: 1-442
Cow position: chr29:34524526-34524069 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-451
Cow position: chr29:19525493-19525028 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-492
Cow position: chr29:2429904-2430394 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 1-497
Cow position: chr29:17137909-17138416 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 1-512
Cow position: chr29:13057548-13058061 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 27

Conread position: 1-512
Cow position: chr29:13585012-13585538 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 86

Conread position: 1-512
Cow position: chr29:15943147-15943675 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 87

Conread position: 1-512
Cow position: chr29:19890351-19890891 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-514
Cow position: chr29:45626139-45626664 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 77

Conread position: 1-528
Cow position: chr29:2745700-2745166 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 40

Conread position: 1-563
Cow position: chr29:16347002-16347561 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-564
Cow position: chr29:34737895-34737330 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 98

Conread position: 1-569
Cow position: chr29:45664-45096 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-569
Cow position: chr29:32893525-32894081 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 384
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 65, 103

Conread position: 1-570
Cow position: chr29:607841-607279 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:726525-727098 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:1478248-1478820 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 85

Conread position: 1-570
Cow position: chr29:2838540-2837967 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:4200188-4200747 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 1-570
Cow position: chr29:6263211-6262640 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:6934287-6934852 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:7812398-7811828 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 10

Conread position: 1-570
Cow position: chr29:7847185-7847761 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:8624400-8623839 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:10644615-10644046 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:10820919-10820346 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:13027008-13027589 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 27

Conread position: 1-570
Cow position: chr29:14208760-14208198 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-570
Cow position: chr29:15966757-15966185 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:16036618-16036048 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 48

Conread position: 1-570
Cow position: chr29:16064507-16065079 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:17407926-17408495 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 40

Conread position: 1-570
Cow position: chr29:19515548-19514976 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:19620472-19619900 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:19656696-19657249 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:21254754-21255320 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 49

Conread position: 1-570
Cow position: chr29:21430061-21429491 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:21473945-21474518 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:22279171-22279741 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 1-570
Cow position: chr29:23979507-23980079 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:26162039-26161465 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:28657574-28656999 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 87

Conread position: 1-570
Cow position: chr29:28697582-28697010 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 85

Conread position: 1-570
Cow position: chr29:31184172-31184745 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:32289187-32289753 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:32352414-32352964 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:32515121-32515697 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 85

Conread position: 1-570
Cow position: chr29:32542932-32543507 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 85

Conread position: 1-570
Cow position: chr29:32556948-32556375 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr29:34795063-34794494 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 54

Conread position: 1-570
Cow position: chr29:35002861-35002305 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 97

Conread position: 1-570
Cow position: chr29:35274227-35273670 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 60

Conread position: 1-570
Cow position: chr29:40294128-40294676 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 85

Conread position: 1-570
Cow position: chr29:40619053-40618486 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 85

Conread position: 1-570
Cow position: chr29:42256182-42255609 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chr29:42806787-42807356 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chr29:45207308-45207878 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 83

Conread position: 1-572
Cow position: chr29:10453019-10452446 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 2-275
Cow position: chr29:16596417-16596681 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 99, 0

Conread position: 2-406
Cow position: chr29:43518397-43517996 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 84

Conread position: 2-511
Cow position: chr29:10845752-10846278 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 85

Conread position: 2-570
Cow position: chr29:2299519-2298950 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 109

Conread position: 2-570
Cow position: chr29:4864138-4864688 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 29

Conread position: 2-570
Cow position: chr29:20253965-20254533 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 30

Conread position: 2-570
Cow position: chr29:32962112-32962679 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 55

Conread position: 3-235
Cow position: chr29:5979930-5979702 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 83

Conread position: 3-483
Cow position: chr29:2693243-2693734 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-500
Cow position: chr29:408464-407951 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-501
Cow position: chr29:7723476-7723985 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-507
Cow position: chr29:2102645-2103165 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 82

Conread position: 3-564
Cow position: chr29:6218995-6218446 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 29

Conread position: 3-570
Cow position: chr29:5240190-5240765 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 3-570
Cow position: chr29:45462031-45462602 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 29

Conread position: 4-561
Cow position: chr29:31094787-31094202 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 82

Conread position: 4-570
Cow position: chr29:35264716-35265286 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 82

Conread position: 5-366
Cow position: chr29:27260317-27259952 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 13

Conread position: 5-421
Cow position: chr29:34538441-34538025 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 283
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 97

Conread position: 5-519
Cow position: chr29:9330717-9331227 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 46

Conread position: 5-570
Cow position: chr29:39076917-39076350 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 27

Conread position: 6-356
Cow position: chr29:18523629-18523279 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 9, 97

Conread position: 7-235
Cow position: chr29:39424336-39424114 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 7-321
Cow position: chr29:31123563-31123250 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-355
Cow position: chr29:40471467-40471814 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr29:21226779-21227344 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr29:22745702-22746269 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr29:25929717-25929139 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 79

Conread position: 7-570
Cow position: chr29:31764842-31765409 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr29:32291402-32291963 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 23

Conread position: 8-509
Cow position: chr29:2483711-2484228 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 78

Conread position: 8-570
Cow position: chr29:15118023-15117459 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 79

Conread position: 9-570
Cow position: chr29:35956501-35955937 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 79

Conread position: 11-520
Cow position: chr29:13044834-13044347 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 348
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 31, 20

Conread position: 16-512
Cow position: chr29:2464059-2463549 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 16

Conread position: 16-570
Cow position: chr29:10237854-10237287 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 37

Conread position: 18-525
Cow position: chr29:32807193-32807704 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 83

Conread position: 19-570
Cow position: chr29:22950080-22949532 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 376
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 257, 14

Conread position: 22-538
Cow position: chr29:9079981-9079450 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 64

Conread position: 28-570
Cow position: chr29:4163511-4164057 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 59

Conread position: 31-512
Cow position: chr29:15699136-15699635 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 32-472
Cow position: chr29:33560572-33560140 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 286
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 101, 50

Conread position: 40-570
Cow position: chr29:24806291-24806824 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 46

Conread position: 45-570
Cow position: chr29:43326351-43326883 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 41

Conread position: 46-248
Cow position: chr29:32207554-32207751 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 198, 40

Conread position: 46-497
Cow position: chr29:3585368-3584898 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 52

Conread position: 51-518
Cow position: chr29:40418823-40418344 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 321
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 193, 50

Conread position: 54-235
Cow position: chr29:30708082-30708257 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 32, 0

Conread position: 94-570
Cow position: chr29:3329476-3329961 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 94

Conread position: 100-570
Cow position: chr29:30433304-30432826 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 389

Conread position: 113-445
Cow position: chr29:15262019-15262362 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 18

Conread position: 135-503
Cow position: chr29:21535984-21535608 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 263
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 104, 142

Conread position: 135-570
Cow position: chr29:32732021-32732476 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 395

Conread position: 137-502
Cow position: chr29:32800194-32800588 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 129

Conread position: 150-570
Cow position: chr29:16102178-16101749 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 361

Conread position: 162-562
Cow position: chr29:29590036-29589634 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 137

Conread position: 171-506
Cow position: chr29:36594890-36594550 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 217
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 94

Conread position: 182-516
Cow position: chr29:14838995-14839343 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 250
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 19

Conread position: 188-570
Cow position: chr29:40156721-40157113 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 339

Conread position: 190-570
Cow position: chr29:27702056-27702446 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 337

Conread position: 192-570
Cow position: chr29:7604373-7604772 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 122

Conread position: 200-570
Cow position: chr29:11785993-11786371 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 287

Conread position: 203-554
Cow position: chr29:38746039-38746401 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 325

Conread position: 222-570
Cow position: chr29:13624363-13624005 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 305

Conread position: 224-525
Cow position: chr29:44021076-44020760 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 53, 115

Conread position: 241-570
Cow position: chr29:35281084-35280748 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 211

Conread position: 243-506
Cow position: chr29:36634317-36634032 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 251-512
Cow position: chr29:19397533-19397811 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 7

Conread position: 254-570
Cow position: chr29:15072437-15072112 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 243
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 272

Conread position: 255-570
Cow position: chr29:13099215-13099541 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 159

Conread position: 258-570
Cow position: chr29:7428094-7427773 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 267

Conread position: 271-570
Cow position: chr29:13849881-13849577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 51, 20

Conread position: 275-570
Cow position: chr29:6872205-6871915 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 89, 157

Conread position: 275-570
Cow position: chr29:38350286-38349992 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 65, 186

Conread position: 275-570
Cow position: chr29:38409262-38409566 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 26, 251

Conread position: 279-570
Cow position: chr29:40498802-40498507 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 61

Conread position: 282-570
Cow position: chr29:38229085-38229376 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 9

Conread position: 283-569
Cow position: chr29:40954818-40954527 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 74, 224

Conread position: 283-570
Cow position: chr29:35739611-35739332 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 8

Conread position: 285-570
Cow position: chr29:18010654-18010944 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 72, 237

Conread position: 293-570
Cow position: chr29:27976917-27976636 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 228

Conread position: 293-570
Cow position: chr29:34780899-34780616 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 228

Conread position: 300-570
Cow position: chr29:9639436-9639160 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 218
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 52, 222

Conread position: 303-571
Cow position: chr29:43691860-43692112 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 66, 13

Conread position: 323-468
Cow position: chr29:11475178-11475323 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 359-570
Cow position: chr29:21167443-21167638 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 361-570
Cow position: chr29:45651368-45651174 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 363-514
Cow position: chr29:16170372-16170221 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 61, 19

Conread position: 365-512
Cow position: chr29:1687924-1688071 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 365-512
Cow position: chr29:26290124-26289979 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 129, 53

Conread position: 365-512
Cow position: chr29:32643743-32643890 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 140

Conread position: 365-512
Cow position: chr29:34850933-34851081 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 365-569
Cow position: chr29:14313973-14313782 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr29:2401864-2402056 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr29:5978142-5977951 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 365-570
Cow position: chr29:11119536-11119343 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr29:16185603-16185410 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr29:24983391-24983202 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr29:26262798-26262992 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 155, 121

Conread position: 365-570
Cow position: chr29:27259709-27259515 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 140

Conread position: 365-570
Cow position: chr29:29506198-29506007 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 55

Conread position: 365-570
Cow position: chr29:32316246-32316438 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 80

Conread position: 366-570
Cow position: chr29:3712161-3712361 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 77

Conread position: 367-570
Cow position: chr29:5961183-5961372 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 368-500
Cow position: chr29:13128588-13128720 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 368-570
Cow position: chr29:16096991-16097181 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 122, 0

Conread position: 373-516
Cow position: chr29:2184599-2184736 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 378-570
Cow position: chr29:960389-960570 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 128

Conread position: 385-570
Cow position: chr29:5785690-5785863 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 385-570
Cow position: chr29:5787296-5787123 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.