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Cow genome map

           
Conread name:
           
rspl22_e17.y1
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr4:13498710-13498834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr4:35791427-35791279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr4:17331288-17331449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr4:20629739-20629900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr4:38153762-38153576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr4:5441989-5441789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr4:18330486-18330286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr4:17539494-17539294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr4:3355445-3355235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr4:161678-161907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:9648636-9648866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 101
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:49744290-49744521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:2227462-2227217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:43834882-43835124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr4:22025620-22025382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:12584108-12583852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr4:45268897-45268628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr4:14818415-14818144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr4:56014099-56013827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:62558053-62557738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:13464328-13464646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr4:16641127-16641456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:41977130-41976790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 100
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr4:47749827-47750189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
164, 99
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr4:15010152-15009807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:1936009-1935661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 31
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr4:34176477-34176128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr4:30284295-30284622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
243, 30
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:17470964-17471321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:43897192-43896828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:63000656-63001016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr4:30473949-30474389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr4:3128330-3128799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr4:29604959-29604486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 98
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr4:9005217-9004727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr4:34385066-34384572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr4:7215261-7214745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 85
               

               
Conread position:
               
1-502
               

               
Cow position:
               
chr4:54147889-54147384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 29
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr4:8673248-8673777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
1-509
               

               
Cow position:
               
chr4:65890317-65890834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr4:6631797-6631264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr4:11108560-11108040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr4:34182211-34181696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr4:67681479-67680935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr4:17586619-17586093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
275, 21
               

               
Conread position:
               
1-517
               

               
Cow position:
               
chr4:55272657-55273199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 188
               

               
Conread position:
               
1-518
               

               
Cow position:
               
chr4:17920439-17919908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr4:58882867-58882324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 66
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr4:16362718-16363286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:358399-358968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:606126-606693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:1047736-1047176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:1187838-1187270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 99
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:1928107-1927547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:2264188-2263616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:2350201-2349631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:3449311-3449890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:4378907-4379461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:5579277-5578734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 99
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:6266698-6266128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:6487852-6487280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:7778915-7779488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:8677318-8677889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:9040460-9041034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:9356753-9357326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:10045252-10044679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:10884152-10884726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 105
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:17033987-17033413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 80
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:20242675-20243244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 29
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:20657544-20656974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 74
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:21341588-21342161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:21844003-21843432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:23304826-23304253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:25596971-25596397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:27177343-27177914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:27288582-27288019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 96
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:27336728-27337303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:27881407-27881980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:28835077-28835646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:29530943-29530369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:31485467-31484894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:31562714-31562143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:32214670-32215241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:33070326-33069751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:33496076-33496647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:34712324-34712905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:35928999-35929571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 96
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:36898892-36899465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:40697952-40697379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:43317133-43316561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:44593860-44593314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:44733141-44733707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:44778678-44778104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:46712081-46711518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:47263292-47263865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 56
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:47751856-47752414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:48029377-48029946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:54758718-54758167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:55510319-55509767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 99
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:55669758-55670332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:57987259-57987833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:67382802-67383365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr4:67393742-67394315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr4:3069437-3069998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 85
               

               
Conread position:
               
1-571
               

               
Cow position:
               
chr4:17876484-17877046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 97
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr4:16606664-16606948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
242, 29
               

               
Conread position:
               
2-347
               

               
Cow position:
               
chr4:13328191-13328524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 30
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr4:5048014-5047657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 99
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr4:6445031-6444684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr4:20184018-20184366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
149, 34
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr4:61596182-61595827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
242, 25
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr4:8935130-8935523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 98
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr4:18100395-18099906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 136
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr4:1239902-1239387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr4:67601150-67600628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 99
               

               
Conread position:
               
2-528
               

               
Cow position:
               
chr4:17776244-17775710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr4:6863715-6863155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 84
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr4:1028708-1028144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr4:22074556-22074011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 99
               

               
Conread position:
               
2-570
               

               
Cow position:
               
chr4:54189307-54189853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 81
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr4:20642641-20642890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
234, 8
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr4:5486874-5486561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 100
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr4:11390968-11390654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 98
               

               
Conread position:
               
3-502
               

               
Cow position:
               
chr4:12606363-12605840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr4:17834333-17833800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr4:54932078-54931566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 92
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:12238710-12238146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 95
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:22904231-22904769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
231, 60
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:25877936-25878509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 15
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:36026753-36026183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 83
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:60651108-60651679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 84
               

               
Conread position:
               
3-570
               

               
Cow position:
               
chr4:61241799-61242367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
5-502
               

               
Cow position:
               
chr4:33562-33061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 68
               

               
Conread position:
               
6-269
               

               
Cow position:
               
chr4:16735089-16734840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
238, 60
               

               
Conread position:
               
7-134
               

               
Cow position:
               
chr4:18404524-18404402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
7-134
               

               
Cow position:
               
chr4:58622004-58621883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr4:10121902-10121673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr4:25129298-25129546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-319
               

               
Cow position:
               
chr4:30578248-30578559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-366
               

               
Cow position:
               
chr4:532566-532924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-554
               

               
Cow position:
               
chr4:47055905-47055354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-561
               

               
Cow position:
               
chr4:17234548-17235100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:4418571-4419138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:15617204-15617782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 525
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:18336433-18335863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:27518851-27518284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:33021111-33020544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:41473309-41472742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:41957283-41957849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:41961418-41961984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:54811340-54810759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:58291262-58291828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:62907500-62906934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
7-570
               

               
Cow position:
               
chr4:64038774-64039304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr4:38931882-38932224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
268, 100
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr4:20606152-20606720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 78
               

               
Conread position:
               
11-184
               

               
Cow position:
               
chr4:16832788-16832959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
11-359
               

               
Cow position:
               
chr4:61952010-61952366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
265, 164
               

               
Conread position:
               
11-570
               

               
Cow position:
               
chr4:15874108-15873546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 33
               

               
Conread position:
               
11-570
               

               
Cow position:
               
chr4:18097086-18096524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 46
               

               
Conread position:
               
11-570
               

               
Cow position:
               
chr4:19206225-19206784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 44
               

               
Conread position:
               
16-199
               

               
Cow position:
               
chr4:10614746-10614565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 85
               

               
Conread position:
               
16-568
               

               
Cow position:
               
chr4:4674047-4673492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 25
               

               
Conread position:
               
21-365
               

               
Cow position:
               
chr4:43899578-43899252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 11
               

               
Conread position:
               
21-366
               

               
Cow position:
               
chr4:64799656-64799991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 77
               

               
Conread position:
               
21-570
               

               
Cow position:
               
chr4:23452477-23451928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 78
               

               
Conread position:
               
22-570
               

               
Cow position:
               
chr4:65430818-65431364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 80
               

               
Conread position:
               
24-347
               

               
Cow position:
               
chr4:52695803-52696120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
220, 77
               

               
Conread position:
               
24-570
               

               
Cow position:
               
chr4:28174324-28173786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 62
               

               
Conread position:
               
25-570
               

               
Cow position:
               
chr4:19236611-19237155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 13
               

               
Conread position:
               
27-338
               

               
Cow position:
               
chr4:62171336-62171638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
192, 35
               

               
Conread position:
               
27-529
               

               
Cow position:
               
chr4:8559751-8559249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 21
               

               
Conread position:
               
29-571
               

               
Cow position:
               
chr4:40217380-40217927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
38-347
               

               
Cow position:
               
chr4:45196709-45197004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
225, 63
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr4:489864-489545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
241, 63
               

               
Conread position:
               
38-571
               

               
Cow position:
               
chr4:39840270-39840805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 60
               

               
Conread position:
               
39-570
               

               
Cow position:
               
chr4:21298228-21297692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 47
               

               
Conread position:
               
42-554
               

               
Cow position:
               
chr4:27891629-27892145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 56
               

               
Conread position:
               
42-570
               

               
Cow position:
               
chr4:26745077-26745605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 56
               

               
Conread position:
               
50-366
               

               
Cow position:
               
chr4:16061860-16062167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 36
               

               
Conread position:
               
51-570
               

               
Cow position:
               
chr4:17821095-17821618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 35
               

               
Conread position:
               
52-512
               

               
Cow position:
               
chr4:38180331-38180798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
56-570
               

               
Cow position:
               
chr4:37785872-37786389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 30
               

               
Conread position:
               
56-570
               

               
Cow position:
               
chr4:64875453-64874939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 42
               

               
Conread position:
               
57-512
               

               
Cow position:
               
chr4:18266663-18267134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 29
               

               
Conread position:
               
65-570
               

               
Cow position:
               
chr4:43883673-43884181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
66-512
               

               
Cow position:
               
chr4:41190580-41190127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 34
               

               
Conread position:
               
74-564
               

               
Cow position:
               
chr4:30541085-30540585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 139
               

               
Conread position:
               
78-570
               

               
Cow position:
               
chr4:12840536-12841030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 116
               

               
Conread position:
               
86-477
               

               
Cow position:
               
chr4:44957817-44957404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
87-570
               

               
Cow position:
               
chr4:18813614-18813122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
94-569
               

               
Cow position:
               
chr4:6547637-6548122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 433
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr4:3169883-3170368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 420
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr4:10424094-10424580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 433
               

               
Conread position:
               
94-570
               

               
Cow position:
               
chr4:35867819-35868282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 262
               

               
Conread position:
               
97-570
               

               
Cow position:
               
chr4:48732282-48732764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 418
               

               
Conread position:
               
117-570
               

               
Cow position:
               
chr4:18004340-18004802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 204
               

               
Conread position:
               
123-512
               

               
Cow position:
               
chr4:5873738-5874137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
131-570
               

               
Cow position:
               
chr4:42331082-42330634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 345
               

               
Conread position:
               
138-511
               

               
Cow position:
               
chr4:14918704-14919098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
141-570
               

               
Cow position:
               
chr4:38909159-38909588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 347
               

               
Conread position:
               
144-570
               

               
Cow position:
               
chr4:26886271-26885835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 383
               

               
Conread position:
               
147-512
               

               
Cow position:
               
chr4:23525242-23525623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
150-570
               

               
Cow position:
               
chr4:38583539-38583968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 347
               

               
Conread position:
               
159-570
               

               
Cow position:
               
chr4:10135534-10135114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 53
               

               
Conread position:
               
161-570
               

               
Cow position:
               
chr4:1500401-1500003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 78
               

               
Conread position:
               
168-570
               

               
Cow position:
               
chr4:33831754-33831342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 359
               

               
Conread position:
               
174-570
               

               
Cow position:
               
chr4:3355252-3354854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
176-570
               

               
Cow position:
               
chr4:35144861-35144457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 351
               

               
Conread position:
               
180-570
               

               
Cow position:
               
chr4:65581203-65581604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 289
               

               
Conread position:
               
181-500
               

               
Cow position:
               
chr4:16967591-16967253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 284
               

               
Conread position:
               
182-512
               

               
Cow position:
               
chr4:19264367-19264720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
182-570
               

               
Cow position:
               
chr4:60855450-60855848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr4:38153597-38153212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
209-570
               

               
Cow position:
               
chr4:15463708-15463342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
211-570
               

               
Cow position:
               
chr4:23150938-23150568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr4:10122130-10122494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 311
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr4:29034349-29034697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
213-570
               

               
Cow position:
               
chr4:65199080-65198713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 314
               

               
Conread position:
               
216-570
               

               
Cow position:
               
chr4:18330810-18331174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 311
               

               
Conread position:
               
216-570
               

               
Cow position:
               
chr4:59783398-59783764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
219-516
               

               
Cow position:
               
chr4:2003821-2003508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
227-512
               

               
Cow position:
               
chr4:19108319-19108010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
228-562
               

               
Cow position:
               
chr4:48496413-48496757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 271
               

               
Conread position:
               
233-570
               

               
Cow position:
               
chr4:24139613-24139961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 295
               

               
Conread position:
               
243-525
               

               
Cow position:
               
chr4:54099003-54098698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
243-570
               

               
Cow position:
               
chr4:6035275-6034939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 272
               

               
Conread position:
               
246-570
               

               
Cow position:
               
chr4:33629277-33628944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
31, 280
               

               
Conread position:
               
248-570
               

               
Cow position:
               
chr4:16832788-16832462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 95
               

               
Conread position:
               
251-519
               

               
Cow position:
               
chr4:10614416-10614148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
254-570
               

               
Cow position:
               
chr4:2227001-2226676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
23, 273
               

               
Conread position:
               
264-570
               

               
Cow position:
               
chr4:62454210-62453900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
271-506
               

               
Cow position:
               
chr4:63639337-63639084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
274-570
               

               
Cow position:
               
chr4:1369268-1368977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
275-543
               

               
Cow position:
               
chr4:58689094-58688829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
60, 22
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr4:26399578-26399875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 235
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr4:36754573-36754873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 226
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr4:41131359-41131059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 247
               

               
Conread position:
               
275-570
               

               
Cow position:
               
chr4:47949551-47949251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 245
               

               
Conread position:
               
283-506
               

               
Cow position:
               
chr4:17472881-17473123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
284-570
               

               
Cow position:
               
chr4:62962562-62962272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
81, 237
               

               
Conread position:
               
295-570
               

               
Cow position:
               
chr4:26875099-26874820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 213
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr4:54972863-54973092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
300-570
               

               
Cow position:
               
chr4:25983123-25983376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
323-570
               

               
Cow position:
               
chr4:50019636-50019405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
329-484
               

               
Cow position:
               
chr4:50846604-50846451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
349-570
               

               
Cow position:
               
chr4:12751243-12751452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
353-570
               

               
Cow position:
               
chr4:61625681-61625478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
361-570
               

               
Cow position:
               
chr4:34176092-34175894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 5
               

               
Conread position:
               
363-570
               

               
Cow position:
               
chr4:33181395-33181198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 125
               

               
Conread position:
               
365-469
               

               
Cow position:
               
chr4:68795607-68795713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
365-506
               

               
Cow position:
               
chr4:37731844-37731709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
365-564
               

               
Cow position:
               
chr4:19049156-19049343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-564
               

               
Cow position:
               
chr4:25354107-25353924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
365-569
               

               
Cow position:
               
chr4:8768938-8769130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
194, 94
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:161977-162168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:4850236-4850429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:6806202-6806395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:7049168-7048975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:10403820-10403627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:11217658-11217842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:13328578-13328768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:14142202-14142396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:15814399-15814207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:16641713-16641906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:17068213-17068025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:17752039-17751846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:19956920-19957113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:20616823-20616630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:23437585-23437395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:33171051-33171244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:36073916-36074108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:38564799-38564606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:48375696-48375889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:60224977-60224787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:61449408-61449601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
365-570
               

               
Cow position:
               
chr4:68880408-68880605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
183, 101
               

               
Conread position:
               
365-571
               

               
Cow position:
               
chr4:67767314-67767508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr4:23552605-23552744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr4:46530349-46530204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
366-568
               

               
Cow position:
               
chr4:9796454-9796267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
366-570
               

               
Cow position:
               
chr4:54696135-54695943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
367-502
               

               
Cow position:
               
chr4:25225883-25226017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
367-517
               

               
Cow position:
               
chr4:14539401-14539254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
369-570
               

               
Cow position:
               
chr4:60580231-60580042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
370-568
               

               
Cow position:
               
chr4:27294188-27294004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
371-564
               

               
Cow position:
               
chr4:34167133-34166951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 135
               

               
Conread position:
               
372-570
               

               
Cow position:
               
chr4:41096881-41097062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
376-512
               

               
Cow position:
               
chr4:53544475-53544341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
377-570
               

               
Cow position:
               
chr4:61724147-61724326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
5, 94
               

               
Conread position:
               
381-570
               

               
Cow position:
               
chr4:27996687-27996862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
387-570
               

               
Cow position:
               
chr4:49744588-49744759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
387-570
               

               
Cow position:
               
chr4:54162147-54161975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
392-570
               

               
Cow position:
               
chr4:2601134-2601297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
397-570
               

               
Cow position:
               
chr4:42404926-42404750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
401-563
               

               
Cow position:
               
chr4:39457591-39457740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
401-570
               

               
Cow position:
               
chr4:11200799-11200956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
407-570
               

               
Cow position:
               
chr4:11026278-11026127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
415-552
               

               
Cow position:
               
chr4:18107295-18107429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
423-570
               

               
Cow position:
               
chr4:6458107-6457960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 52
               
Show alignments to all cow chromosomes.