Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-170
Cow position: chr9:3311302-3311465 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 14, 86

Conread position: 1-173
Cow position: chr9:60784513-60784679 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 1-196
Cow position: chr9:5525935-5525745 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 172, 43

Conread position: 1-219
Cow position: chr9:18109105-18109314 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 1-235
Cow position: chr9:22438039-22438265 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 1-237
Cow position: chr9:34676692-34676463 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 87

Conread position: 1-251
Cow position: chr9:34240416-34240171 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 83

Conread position: 1-272
Cow position: chr9:202607-202335 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 85

Conread position: 1-272
Cow position: chr9:1000148-1000414 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-275
Cow position: chr9:51179218-51178936 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 142, 85

Conread position: 1-318
Cow position: chr9:14766746-14767044 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 86

Conread position: 1-365
Cow position: chr9:49283527-49283885 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 32

Conread position: 1-366
Cow position: chr9:2681258-2681600 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 267, 85

Conread position: 1-366
Cow position: chr9:8163903-8163566 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 165, 82

Conread position: 1-366
Cow position: chr9:26081635-26081274 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 74

Conread position: 1-366
Cow position: chr9:26277337-26277689 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 85

Conread position: 1-366
Cow position: chr9:34695930-34696301 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 1-366
Cow position: chr9:53530405-53530763 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 56, 98

Conread position: 1-380
Cow position: chr9:52723089-52723470 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 100

Conread position: 1-389
Cow position: chr9:27099020-27099404 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 179, 108

Conread position: 1-425
Cow position: chr9:14794541-14794968 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 35

Conread position: 1-431
Cow position: chr9:35022679-35023093 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 220, 15

Conread position: 1-495
Cow position: chr9:43667516-43668020 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 1-501
Cow position: chr9:2173220-2173740 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 1-502
Cow position: chr9:31113837-31114322 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 107

Conread position: 1-503
Cow position: chr9:10939407-10939925 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-506
Cow position: chr9:10567683-10567160 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 1-506
Cow position: chr9:13472871-13472361 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 38

Conread position: 1-507
Cow position: chr9:36845239-36844726 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 1-509
Cow position: chr9:1850930-1850437 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 276, 37

Conread position: 1-509
Cow position: chr9:14002723-14003244 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-511
Cow position: chr9:2484933-2484409 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 97

Conread position: 1-511
Cow position: chr9:59196538-59197066 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 87

Conread position: 1-512
Cow position: chr9:2526972-2527494 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 26

Conread position: 1-512
Cow position: chr9:3389111-3388613 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 43

Conread position: 1-512
Cow position: chr9:3545511-3546037 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 55

Conread position: 1-512
Cow position: chr9:5534249-5533722 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 97

Conread position: 1-512
Cow position: chr9:9312634-9312121 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 337
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 119, 102

Conread position: 1-512
Cow position: chr9:12250673-12251189 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 104

Conread position: 1-512
Cow position: chr9:13312248-13312773 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position: chr9:30674758-30675285 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 85

Conread position: 1-512
Cow position: chr9:62444291-62443769 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 26

Conread position: 1-513
Cow position: chr9:3998076-3997550 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-514
Cow position: chr9:17008279-17007747 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 99

Conread position: 1-518
Cow position: chr9:56176453-56176983 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-519
Cow position: chr9:8097839-8098372 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 23

Conread position: 1-524
Cow position: chr9:6886274-6886813 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-525
Cow position: chr9:26054730-26055259 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 72

Conread position: 1-547
Cow position: chr9:56301757-56301217 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-552
Cow position: chr9:38678812-38679354 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-561
Cow position: chr9:44203386-44202833 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-568
Cow position: chr9:17017432-17018008 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 90

Conread position: 1-568
Cow position: chr9:22655496-22656052 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-569
Cow position: chr9:49457008-49457565 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 101

Conread position: 1-570
Cow position: chr9:40916-40339 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 383
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 143, 10

Conread position: 1-570
Cow position: chr9:128168-127600 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:826247-825649 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 35

Conread position: 1-570
Cow position: chr9:1063016-1062440 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 89

Conread position: 1-570
Cow position: chr9:1071602-1071028 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 86

Conread position: 1-570
Cow position: chr9:1991852-1991298 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 85

Conread position: 1-570
Cow position: chr9:2496058-2495485 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 99

Conread position: 1-570
Cow position: chr9:2835312-2834744 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:3074845-3075395 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 85

Conread position: 1-570
Cow position: chr9:4940816-4940243 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 86

Conread position: 1-570
Cow position: chr9:5430150-5430722 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:6708236-6707662 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 1-570
Cow position: chr9:6765088-6764513 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 84

Conread position: 1-570
Cow position: chr9:7059379-7058795 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 85

Conread position: 1-570
Cow position: chr9:7104548-7103975 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:9015757-9016330 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:9198787-9199346 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 30

Conread position: 1-570
Cow position: chr9:9958497-9957928 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 95

Conread position: 1-570
Cow position: chr9:10856703-10857288 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:13180589-13181170 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 49

Conread position: 1-570
Cow position: chr9:16178278-16178840 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 65

Conread position: 1-570
Cow position: chr9:17301448-17300874 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 32

Conread position: 1-570
Cow position: chr9:17303289-17302722 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:18507141-18506568 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:18539347-18539913 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 86

Conread position: 1-570
Cow position: chr9:19156601-19156036 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:20941139-20941734 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 510

Conread position: 1-570
Cow position: chr9:21411995-21412553 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:26280531-26281089 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 103

Conread position: 1-570
Cow position: chr9:26325428-26326002 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 86

Conread position: 1-570
Cow position: chr9:27037791-27038369 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chr9:27782207-27781656 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 85

Conread position: 1-570
Cow position: chr9:28024503-28025075 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 40

Conread position: 1-570
Cow position: chr9:28658366-28657801 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:28680883-28681456 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:30139909-30139360 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 33

Conread position: 1-570
Cow position: chr9:42569899-42570471 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:46626996-46627567 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-570
Cow position: chr9:47005425-47005990 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 25

Conread position: 1-570
Cow position: chr9:47044630-47045203 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 83

Conread position: 1-570
Cow position: chr9:47170729-47171309 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 108

Conread position: 1-570
Cow position: chr9:50840116-50840688 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:54459818-54459246 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:59480165-59479601 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chr9:64048968-64049525 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 99

Conread position: 1-571
Cow position: chr9:5627502-5628076 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chr9:34946341-34945757 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 2-223
Cow position: chr9:29337449-29337661 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 2-267
Cow position: chr9:4719231-4719488 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 242, 30

Conread position: 2-500
Cow position: chr9:8952353-8951836 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 99

Conread position: 2-512
Cow position: chr9:1249313-1248787 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 84

Conread position: 2-512
Cow position: chr9:59508489-59507969 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 99

Conread position: 2-561
Cow position: chr9:37067530-37068088 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 103

Conread position: 2-562
Cow position: chr9:54995331-54995883 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 22

Conread position: 2-570
Cow position: chr9:17633161-17633743 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 101

Conread position: 2-570
Cow position: chr9:17870178-17870762 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 99

Conread position: 2-570
Cow position: chr9:21461169-21461718 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 92

Conread position: 2-570
Cow position: chr9:26088318-26087747 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 70

Conread position: 2-570
Cow position: chr9:61740351-61739794 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 84

Conread position: 3-199
Cow position: chr9:1741181-1740992 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 155
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 83, 0

Conread position: 3-331
Cow position: chr9:11157674-11157352 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 77

Conread position: 3-355
Cow position: chr9:61238268-61237916 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 255
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 147, 81

Conread position: 3-357
Cow position: chr9:35593409-35593051 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 84

Conread position: 3-503
Cow position: chr9:3757146-3756628 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-512
Cow position: chr9:14045368-14045879 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 29

Conread position: 3-528
Cow position: chr9:29787973-29787448 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 94

Conread position: 3-570
Cow position: chr9:3806282-3806850 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 84

Conread position: 3-570
Cow position: chr9:7005404-7005997 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 525

Conread position: 3-570
Cow position: chr9:23421275-23421842 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 99

Conread position: 3-570
Cow position: chr9:37158925-37158356 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 4-203
Cow position: chr9:2222443-2222249 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 192, 97

Conread position: 6-262
Cow position: chr9:16516445-16516695 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 186, 5

Conread position: 6-367
Cow position: chr9:25976218-25976575 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 57

Conread position: 6-570
Cow position: chr9:40143666-40143097 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 80

Conread position: 7-199
Cow position: chr9:2806671-2806487 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 0

Conread position: 7-272
Cow position: chr9:10643949-10643690 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 165
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 7-275
Cow position: chr9:35543839-35543576 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-321
Cow position: chr9:8283519-8283206 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-364
Cow position: chr9:3052290-3051937 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position: chr9:39813004-39813362 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position: chr9:41507157-41506799 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-366
Cow position: chr9:43493633-43493991 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-500
Cow position: chr9:6549866-6550375 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-555
Cow position: chr9:28774553-28774026 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 95

Conread position: 7-556
Cow position: chr9:45876209-45876760 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:218426-217860 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 79

Conread position: 7-570
Cow position: chr9:778127-777555 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 81

Conread position: 7-570
Cow position: chr9:1099283-1099850 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:1998606-1998045 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 7-570
Cow position: chr9:2856533-2857099 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:2864871-2864311 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 56

Conread position: 7-570
Cow position: chr9:2873163-2873731 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:3061280-3061843 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:5452951-5452384 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:12161297-12161846 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 93

Conread position: 7-570
Cow position: chr9:15053193-15052633 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 93

Conread position: 7-570
Cow position: chr9:28785027-28785599 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 83

Conread position: 7-570
Cow position: chr9:43495823-43496390 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:44168279-44168847 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:46668109-46667542 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 73

Conread position: 7-570
Cow position: chr9:48795603-48795036 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chr9:52525847-52526407 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 44

Conread position: 7-570
Cow position: chr9:64012540-64011973 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 8-318
Cow position: chr9:3412227-3411921 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 236, 76

Conread position: 8-512
Cow position: chr9:43226013-43225491 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 80

Conread position: 8-570
Cow position: chr9:27897700-27898285 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 78

Conread position: 8-570
Cow position: chr9:31417814-31417260 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 78

Conread position: 8-571
Cow position: chr9:791625-791048 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 78

Conread position: 11-570
Cow position: chr9:31810271-31810833 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 75

Conread position: 14-570
Cow position: chr9:55797408-55796850 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 381
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 230, 87

Conread position: 15-570
Cow position: chr9:9261086-9261627 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 15-570
Cow position: chr9:59431208-59431755 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 382
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 229, 63

Conread position: 16-342
Cow position: chr9:3934948-3934633 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 63, 85

Conread position: 17-570
Cow position: chr9:3960468-3959927 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 84

Conread position: 18-564
Cow position: chr9:2208967-2208419 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 23

Conread position: 18-570
Cow position: chr9:5006685-5007229 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 20

Conread position: 18-570
Cow position: chr9:22569803-22570360 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 70

Conread position: 20-501
Cow position: chr9:52401661-52402158 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 66

Conread position: 23-570
Cow position: chr9:52002388-52001854 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 43

Conread position: 24-258
Cow position: chr9:7459161-7458938 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 215, 77

Conread position: 25-346
Cow position: chr9:50063229-50062910 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 217
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 17, 62

Conread position: 26-570
Cow position: chr9:37097329-37097861 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 61

Conread position: 27-445
Cow position: chr9:35747174-35746764 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 219, 51

Conread position: 27-570
Cow position: chr9:52408609-52408068 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 73

Conread position: 28-570
Cow position: chr9:32972077-32972622 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 58

Conread position: 32-570
Cow position: chr9:30282287-30281761 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 54

Conread position: 37-367
Cow position: chr9:15835963-15835637 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 139, 11

Conread position: 37-570
Cow position: chr9:12260643-12260109 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 48

Conread position: 38-192
Cow position: chr9:27392634-27392783 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 9, 49

Conread position: 38-390
Cow position: chr9:23044191-23044532 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 7

Conread position: 41-512
Cow position: chr9:62130757-62131255 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 332
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 107, 60

Conread position: 42-361
Cow position: chr9:50003172-50003490 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 44

Conread position: 43-520
Cow position: chr9:4128219-4127721 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 55

Conread position: 45-570
Cow position: chr9:35820-35297 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 41

Conread position: 46-570
Cow position: chr9:6252297-6252820 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 52

Conread position: 46-570
Cow position: chr9:37174677-37174149 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 40

Conread position: 47-483
Cow position: chr9:10325674-10326121 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 39

Conread position: 49-514
Cow position: chr9:26100721-26100263 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 52

Conread position: 50-330
Cow position: chr9:1259010-1259278 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 15, 37

Conread position: 51-235
Cow position: chr9:42718617-42718795 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 35, 0

Conread position: 51-321
Cow position: chr9:43845359-43845629 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 35

Conread position: 51-570
Cow position: chr9:39303820-39303297 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 35

Conread position: 54-458
Cow position: chr9:46525469-46525050 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 47

Conread position: 58-223
Cow position: chr9:17061900-17061741 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 91-570
Cow position: chr9:34059866-34059378 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 172

Conread position: 92-570
Cow position: chr9:13220310-13220793 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 254

Conread position: 92-570
Cow position: chr9:30401059-30401538 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 46

Conread position: 94-570
Cow position: chr9:55031285-55031760 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 205

Conread position: 101-508
Cow position: chr9:62669773-62669348 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 86

Conread position: 109-506
Cow position: chr9:5328562-5328153 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 313

Conread position: 124-570
Cow position: chr9:22319613-22319160 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 127-569
Cow position: chr9:6365180-6365631 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 385

Conread position: 138-570
Cow position: chr9:29193746-29193314 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 49

Conread position: 139-570
Cow position: chr9:24918473-24918032 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 331

Conread position: 147-431
Cow position: chr9:62717628-62717917 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 137, 92

Conread position: 150-570
Cow position: chr9:53776527-53776948 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 146

Conread position: 151-564
Cow position: chr9:2548868-2548445 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 376

Conread position: 156-570
Cow position: chr9:45791680-45792104 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 371

Conread position: 158-548
Cow position: chr9:48851352-48850953 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 254
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 86, 104

Conread position: 160-570
Cow position: chr9:56862311-56861913 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 41

Conread position: 161-570
Cow position: chr9:37253241-37253660 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 366

Conread position: 168-512
Cow position: chr9:51010411-51010769 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 166

Conread position: 172-560
Cow position: chr9:43856689-43856292 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 154

Conread position: 176-570
Cow position: chr9:54413755-54413354 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 45

Conread position: 176-571
Cow position: chr9:17587997-17588394 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 24

Conread position: 181-570
Cow position: chr9:41313184-41312785 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 335

Conread position: 182-570
Cow position: chr9:10679066-10678674 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 6

Conread position: 212-570
Cow position: chr9:9021717-9021349 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 315

Conread position: 214-512
Cow position: chr9:1837845-1838165 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 219-512
Cow position: chr9:18830638-18830948 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 58, 25

Conread position: 222-570
Cow position: chr9:12285809-12285452 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 203

Conread position: 223-570
Cow position: chr9:42868969-42868616 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 282

Conread position: 225-570
Cow position: chr9:18109602-18109955 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 19, 283

Conread position: 227-550
Cow position: chr9:37181765-37182098 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 17, 300

Conread position: 236-502
Cow position: chr9:60589689-60589969 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 35

Conread position: 238-511
Cow position: chr9:5525403-5525134 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 137

Conread position: 243-570
Cow position: chr9:13187124-13187460 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 34, 283

Conread position: 244-561
Cow position: chr9:23526681-23527005 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 69

Conread position: 247-507
Cow position: chr9:13492679-13492960 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 30, 9

Conread position: 247-570
Cow position: chr9:34238835-34238503 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 30, 80

Conread position: 247-570
Cow position: chr9:62764382-62764050 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 218

Conread position: 251-570
Cow position: chr9:33843253-33843579 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 26, 7

Conread position: 257-506
Cow position: chr9:31124010-31124280 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 258-570
Cow position: chr9:9210078-9210399 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 242
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 268

Conread position: 266-502
Cow position: chr9:1519540-1519792 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 190
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 96, 13

Conread position: 267-570
Cow position: chr9:51178720-51178413 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 9

Conread position: 274-570
Cow position: chr9:382934-382638 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 237

Conread position: 275-570
Cow position: chr9:9871895-9872195 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 82, 247

Conread position: 279-570
Cow position: chr9:174813-174517 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 78, 243

Conread position: 279-570
Cow position: chr9:34900426-34900732 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 217

Conread position: 284-506
Cow position: chr9:9491976-9491737 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 64

Conread position: 293-570
Cow position: chr9:59496209-59495927 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 64, 229

Conread position: 297-570
Cow position: chr9:19545489-19545766 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 171

Conread position: 327-512
Cow position: chr9:64562235-64562419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 103

Conread position: 365-502
Cow position: chr9:22442554-22442690 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 365-513
Cow position: chr9:2214202-2214349 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 365-557
Cow position: chr9:2618734-2618554 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 365-561
Cow position: chr9:772183-772001 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 365-570
Cow position: chr9:873719-873908 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 110, 0

Conread position: 365-570
Cow position: chr9:1983438-1983627 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 365-570
Cow position: chr9:3052328-3052521 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:3933049-3932857 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 365-570
Cow position: chr9:4191344-4191537 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:8282205-8282014 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 0

Conread position: 365-570
Cow position: chr9:15802462-15802655 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 365-570
Cow position: chr9:18710556-18710748 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:22803589-22803395 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 52, 141

Conread position: 365-570
Cow position: chr9:25596715-25596907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:26077803-26077621 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 365-570
Cow position: chr9:33056846-33057038 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 0

Conread position: 365-570
Cow position: chr9:34917682-34917874 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 200, 135

Conread position: 365-570
Cow position: chr9:35565476-35565283 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:35624377-35624570 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:36829989-36829796 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:43494111-43494304 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:50003786-50003979 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:50326760-50326952 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 365-570
Cow position: chr9:60409465-60409658 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:62818158-62817965 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chr9:63563477-63563676 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 366-569
Cow position: chr9:5059018-5058825 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 107, 120

Conread position: 366-570
Cow position: chr9:34567712-34567902 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 172, 63

Conread position: 366-570
Cow position: chr9:42902371-42902180 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 366-572
Cow position: chr9:59167658-59167465 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 17

Conread position: 367-571
Cow position: chr9:49981569-49981758 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 369-570
Cow position: chr9:1259499-1259689 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 132

Conread position: 369-570
Cow position: chr9:25548087-25547898 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 135, 0

Conread position: 369-570
Cow position: chr9:37168539-37168722 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 371-570
Cow position: chr9:1307283-1307096 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 374-570
Cow position: chr9:34460531-34460347 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 376-570
Cow position: chr9:40316211-40316392 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 9

Conread position: 378-512
Cow position: chr9:24725676-24725808 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 384-514
Cow position: chr9:44820968-44821097 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 385-570
Cow position: chr9:49259423-49259251 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 386-553
Cow position: chr9:7830819-7830664 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 397-562
Cow position: chr9:15214626-15214783 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 95

Conread position: 408-570
Cow position: chr9:15981809-15981958 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 97, 0

Show alignments to all cow chromosomes.