Cow genome map

Conread name: rspl22_e17.y1

Conread position: 1-132
Cow position: chrX:29286868-29286993 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 1-134
Cow position: chrX:37839544-37839671 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 1-141
Cow position: chrX:18192990-18193124 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 1-149
Cow position: chrX:27615265-27615406 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 1-169
Cow position: chrX:21253871-21254032 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 1-169
Cow position: chrX:21414186-21414348 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 1-178
Cow position: chrX:20741037-20740866 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 41, 30

Conread position: 1-184
Cow position: chrX:21767224-21767402 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 86

Conread position: 1-204
Cow position: chrX:360120-360318 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-242
Cow position: chrX:23453461-23453226 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 1-249
Cow position: chrX:28648290-28648047 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-251
Cow position: chrX:14459814-14459569 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-262
Cow position: chrX:17664606-17664349 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 100

Conread position: 1-273
Cow position: chrX:1528478-1528215 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 32

Conread position: 1-274
Cow position: chrX:37814742-37815010 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-275
Cow position: chrX:20725562-20725831 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-301
Cow position: chrX:12345528-12345832 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 90

Conread position: 1-310
Cow position: chrX:25406159-25405853 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 100

Conread position: 1-311
Cow position: chrX:5281191-5280888 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 193
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 243, 25

Conread position: 1-316
Cow position: chrX:34552986-34553293 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 85

Conread position: 1-325
Cow position: chrX:15992902-15993227 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 214
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 26

Conread position: 1-353
Cow position: chrX:36839307-36839636 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 27

Conread position: 1-361
Cow position: chrX:3418625-3418267 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 56

Conread position: 1-361
Cow position: chrX:3465770-3465411 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 1-366
Cow position: chrX:5549972-5550336 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-366
Cow position: chrX:12464598-12464963 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-366
Cow position: chrX:37761301-37761662 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 100

Conread position: 1-366
Cow position: chrX:41880530-41880169 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-366
Cow position: chrX:43437312-43436944 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 74

Conread position: 1-367
Cow position: chrX:13071854-13071489 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 85

Conread position: 1-367
Cow position: chrX:13092414-13092049 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 85

Conread position: 1-371
Cow position: chrX:29094723-29094359 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 1-431
Cow position: chrX:4300349-4299902 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 103

Conread position: 1-442
Cow position: chrX:11458227-11457766 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 89

Conread position: 1-445
Cow position: chrX:13070144-13069685 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 144, 100

Conread position: 1-445
Cow position: chrX:13090705-13090246 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 144, 100

Conread position: 1-450
Cow position: chrX:5298649-5298184 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-484
Cow position: chrX:12185676-12186188 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 451

Conread position: 1-489
Cow position: chrX:18462941-18463446 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 106

Conread position: 1-500
Cow position: chrX:26623211-26622702 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 50

Conread position: 1-502
Cow position: chrX:26446691-26447200 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 99

Conread position: 1-502
Cow position: chrX:27591429-27590916 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-502
Cow position: chrX:40828508-40827997 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 23

Conread position: 1-512
Cow position: chrX:9170014-9169487 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-512
Cow position: chrX:10529193-10528668 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 85

Conread position: 1-512
Cow position: chrX:10867258-10866745 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-512
Cow position: chrX:16035916-16035390 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-512
Cow position: chrX:16045563-16046091 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-512
Cow position: chrX:16278250-16278774 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 86

Conread position: 1-512
Cow position: chrX:21892100-21892626 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-512
Cow position: chrX:30137264-30136748 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 31

Conread position: 1-519
Cow position: chrX:28556961-28557491 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 96

Conread position: 1-529
Cow position: chrX:3581529-3582068 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 85

Conread position: 1-552
Cow position: chrX:5294751-5294200 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 31

Conread position: 1-553
Cow position: chrX:22565093-22564535 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-556
Cow position: chrX:26442656-26442101 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 46

Conread position: 1-559
Cow position: chrX:17054162-17054721 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-560
Cow position: chrX:36194687-36195250 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-561
Cow position: chrX:3082552-3081976 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 408

Conread position: 1-561
Cow position: chrX:28753745-28753181 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-561
Cow position: chrX:39561068-39560504 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-563
Cow position: chrX:28606493-28605934 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 85

Conread position: 1-564
Cow position: chrX:5332840-5332275 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-564
Cow position: chrX:16854774-16854207 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-567
Cow position: chrX:30166068-30165501 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-568
Cow position: chrX:14125653-14125082 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 1-569
Cow position: chrX:11743863-11744430 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 101

Conread position: 1-569
Cow position: chrX:23387956-23387375 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 483

Conread position: 1-569
Cow position: chrX:23395198-23395770 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-569
Cow position: chrX:28519121-28518557 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 1-570
Cow position: chrX:322498-323078 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 94

Conread position: 1-570
Cow position: chrX:1549557-1550129 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 50

Conread position: 1-570
Cow position: chrX:2560356-2559796 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 85

Conread position: 1-570
Cow position: chrX:2579012-2579583 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:3360413-3360985 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chrX:3373260-3372688 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chrX:4906405-4905823 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-570
Cow position: chrX:5354709-5354139 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 83

Conread position: 1-570
Cow position: chrX:5865736-5866310 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-570
Cow position: chrX:6236248-6235687 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 1-570
Cow position: chrX:6580526-6581099 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:7096048-7096622 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 87

Conread position: 1-570
Cow position: chrX:7484398-7484971 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:7552210-7551637 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:7754498-7755070 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 56

Conread position: 1-570
Cow position: chrX:8482043-8482611 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 37

Conread position: 1-570
Cow position: chrX:8640379-8640952 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:9010925-9011495 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:9095234-9095807 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:11462402-11461832 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:12308171-12307598 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:12359482-12360052 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 1-570
Cow position: chrX:12997319-12996746 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 35

Conread position: 1-570
Cow position: chrX:13406694-13406122 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-570
Cow position: chrX:14461909-14462479 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 88

Conread position: 1-570
Cow position: chrX:14782754-14782181 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:15122570-15121997 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 85

Conread position: 1-570
Cow position: chrX:15621940-15621367 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:15978360-15977789 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:16360411-16359843 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:16525395-16525954 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-570
Cow position: chrX:16702275-16702835 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 31

Conread position: 1-570
Cow position: chrX:16781874-16782444 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-570
Cow position: chrX:16804274-16803703 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 74

Conread position: 1-570
Cow position: chrX:16809221-16808650 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 74

Conread position: 1-570
Cow position: chrX:18222004-18222577 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:18489134-18488550 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 1-570
Cow position: chrX:18657213-18656641 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:18951139-18950572 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:19398369-19398942 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:19474557-19473984 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:19608268-19608840 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:20357408-20356831 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 30

Conread position: 1-570
Cow position: chrX:21389169-21389742 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:21582033-21582607 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:21591885-21592455 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 15

Conread position: 1-570
Cow position: chrX:21793182-21793754 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:21832483-21833048 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 10

Conread position: 1-570
Cow position: chrX:22077749-22077178 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:22492628-22493195 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:22539443-22538869 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:22810487-22811054 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 85

Conread position: 1-570
Cow position: chrX:22818666-22819242 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 99

Conread position: 1-570
Cow position: chrX:23021905-23022477 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 26

Conread position: 1-570
Cow position: chrX:23039390-23038821 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 56

Conread position: 1-570
Cow position: chrX:23134190-23134754 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 1-570
Cow position: chrX:23217665-23218237 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 83

Conread position: 1-570
Cow position: chrX:23222437-23221878 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 87

Conread position: 1-570
Cow position: chrX:23279618-23280188 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:24412619-24413194 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 56

Conread position: 1-570
Cow position: chrX:24468531-24467960 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 86

Conread position: 1-570
Cow position: chrX:24589137-24588570 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 86

Conread position: 1-570
Cow position: chrX:24734261-24734831 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 55

Conread position: 1-570
Cow position: chrX:24770265-24769692 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:25450926-25451500 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 32

Conread position: 1-570
Cow position: chrX:26274737-26275302 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:26617722-26618288 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-570
Cow position: chrX:26756048-26755478 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:27304522-27305093 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:27317822-27318395 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:27497423-27497993 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 85

Conread position: 1-570
Cow position: chrX:27978231-27977670 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 31

Conread position: 1-570
Cow position: chrX:27983762-27983189 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 102

Conread position: 1-570
Cow position: chrX:28587573-28588135 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 98

Conread position: 1-570
Cow position: chrX:28625161-28624597 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 10

Conread position: 1-570
Cow position: chrX:29099011-29099581 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 85

Conread position: 1-570
Cow position: chrX:29791212-29790653 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 55

Conread position: 1-570
Cow position: chrX:29880688-29880116 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 86

Conread position: 1-570
Cow position: chrX:29891698-29892251 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 78

Conread position: 1-570
Cow position: chrX:29908618-29908038 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 1-570
Cow position: chrX:29916752-29916181 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 26

Conread position: 1-570
Cow position: chrX:29941772-29942321 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 43

Conread position: 1-570
Cow position: chrX:30053877-30053304 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:30181333-30180760 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:30229520-30228949 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 97

Conread position: 1-570
Cow position: chrX:31201432-31202006 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:31728068-31728632 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 52

Conread position: 1-570
Cow position: chrX:31979248-31978677 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:32064576-32064004 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:32145665-32145091 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 99

Conread position: 1-570
Cow position: chrX:39547994-39548563 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-570
Cow position: chrX:41847942-41847366 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 31

Conread position: 1-570
Cow position: chrX:42732472-42733036 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 54

Conread position: 1-571
Cow position: chrX:2480037-2479463 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chrX:4767297-4767860 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 85

Conread position: 1-571
Cow position: chrX:5247985-5248552 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 50

Conread position: 1-571
Cow position: chrX:29911926-29912504 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 1-571
Cow position: chrX:30164639-30164073 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 26

Conread position: 2-185
Cow position: chrX:36690856-36690679 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 2-231
Cow position: chrX:26433973-26434195 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 2-235
Cow position: chrX:40694110-40693883 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 0

Conread position: 2-262
Cow position: chrX:2145554-2145805 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 235, 76

Conread position: 2-339
Cow position: chrX:9260942-9261278 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 99

Conread position: 2-356
Cow position: chrX:38588318-38587969 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 99

Conread position: 2-365
Cow position: chrX:4995246-4995602 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 74, 99

Conread position: 2-366
Cow position: chrX:13282060-13282422 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 9

Conread position: 2-366
Cow position: chrX:21627834-21627477 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 65

Conread position: 2-404
Cow position: chrX:35384249-35383851 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 60, 104

Conread position: 2-511
Cow position: chrX:39697361-39697884 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 64

Conread position: 2-547
Cow position: chrX:37487539-37488098 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 84

Conread position: 2-562
Cow position: chrX:2382058-2382623 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 2-570
Cow position: chrX:22126189-22125691 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 389
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 95, 0

Conread position: 3-324
Cow position: chrX:4481292-4481612 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 97

Conread position: 3-524
Cow position: chrX:33829637-33830173 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 96

Conread position: 3-570
Cow position: chrX:4342345-4342915 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-570
Cow position: chrX:5321118-5320553 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 48

Conread position: 3-570
Cow position: chrX:5360603-5361174 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 83

Conread position: 3-570
Cow position: chrX:24175351-24174789 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 98

Conread position: 3-570
Cow position: chrX:24483768-24483199 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 28

Conread position: 3-570
Cow position: chrX:26530568-26531137 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 93

Conread position: 4-570
Cow position: chrX:16041082-16040515 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 59

Conread position: 4-570
Cow position: chrX:21342990-21343559 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 82

Conread position: 5-333
Cow position: chrX:13431338-13431013 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 32

Conread position: 5-473
Cow position: chrX:45112402-45112870 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 81

Conread position: 5-570
Cow position: chrX:11074550-11074021 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 9

Conread position: 5-570
Cow position: chrX:21226076-21226641 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 5-570
Cow position: chrX:30059492-30060051 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 75

Conread position: 6-254
Cow position: chrX:15142564-15142321 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 79

Conread position: 6-562
Cow position: chrX:19877427-19877973 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 191

Conread position: 6-571
Cow position: chrX:24110010-24109439 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 21

Conread position: 7-177
Cow position: chrX:2117792-2117628 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 7-249
Cow position: chrX:13179257-13179012 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 7-275
Cow position: chrX:9086307-9086570 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-289
Cow position: chrX:30167483-30167202 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-306
Cow position: chrX:12312404-12312106 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 93

Conread position: 7-366
Cow position: chrX:22837579-22837937 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-427
Cow position: chrX:5426687-5427124 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 80

Conread position: 7-512
Cow position: chrX:27595629-27595108 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 7-561
Cow position: chrX:27423671-27423128 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:2009107-2008534 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 11

Conread position: 7-570
Cow position: chrX:2813878-2813318 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:4623356-4622789 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:9127652-9128220 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:11146739-11146168 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 80

Conread position: 7-570
Cow position: chrX:11409737-11409170 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:11976849-11976282 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 94

Conread position: 7-570
Cow position: chrX:12144696-12145263 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 20

Conread position: 7-570
Cow position: chrX:13929136-13928578 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:14597454-14598010 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 91

Conread position: 7-570
Cow position: chrX:15261018-15260455 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:16710566-16711120 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 25

Conread position: 7-570
Cow position: chrX:17782102-17782664 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:22612007-22612567 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:26231161-26230594 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:29225075-29225642 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:30436021-30435453 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:30965389-30964822 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:31495335-31495900 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:34094303-34094870 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:35532453-35533018 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:36536132-36535567 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 79

Conread position: 7-570
Cow position: chrX:37851735-37852300 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 79

Conread position: 7-570
Cow position: chrX:39713150-39713715 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 25

Conread position: 8-164
Cow position: chrX:2226540-2226691 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 8-196
Cow position: chrX:13056387-13056572 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 97

Conread position: 8-349
Cow position: chrX:2501187-2501526 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 78

Conread position: 8-570
Cow position: chrX:672392-671829 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 48

Conread position: 8-570
Cow position: chrX:41885588-41885014 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 450

Conread position: 9-371
Cow position: chrX:24928394-24928756 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 77

Conread position: 11-436
Cow position: chrX:10410465-10410047 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 281
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 31, 13

Conread position: 11-447
Cow position: chrX:37904648-37905095 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 293
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 261, 67

Conread position: 11-512
Cow position: chrX:29171179-29170663 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 75

Conread position: 12-570
Cow position: chrX:22579774-22579223 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 96

Conread position: 13-570
Cow position: chrX:21767407-21767964 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 85

Conread position: 15-321
Cow position: chrX:46295973-46296276 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 71

Conread position: 15-502
Cow position: chrX:5640268-5639801 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 17

Conread position: 16-366
Cow position: chrX:39564679-39564331 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 16-508
Cow position: chrX:24260764-24260285 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 326
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 228, 70

Conread position: 16-511
Cow position: chrX:13415829-13415328 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 55

Conread position: 16-570
Cow position: chrX:42223147-42222609 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 25

Conread position: 17-500
Cow position: chrX:28879970-28879475 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 70

Conread position: 17-556
Cow position: chrX:6855079-6854568 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 81

Conread position: 17-570
Cow position: chrX:7571994-7572555 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 85

Conread position: 18-570
Cow position: chrX:17891153-17891710 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 82

Conread position: 23-321
Cow position: chrX:2487260-2487551 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 63

Conread position: 23-555
Cow position: chrX:8435585-8435053 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 63

Conread position: 24-226
Cow position: chrX:30687996-30688192 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 24-570
Cow position: chrX:7120221-7120771 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 62

Conread position: 24-570
Cow position: chrX:30836001-30836551 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 62

Conread position: 25-570
Cow position: chrX:41155926-41156475 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 62

Conread position: 27-350
Cow position: chrX:30316787-30317105 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 210
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 199, 74

Conread position: 28-570
Cow position: chrX:37080895-37080354 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 13

Conread position: 29-568
Cow position: chrX:27754045-27754589 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 26

Conread position: 29-570
Cow position: chrX:28132723-28133261 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 57

Conread position: 38-353
Cow position: chrX:27070464-27070777 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 151, 24

Conread position: 39-361
Cow position: chrX:1948800-1948479 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 40

Conread position: 39-481
Cow position: chrX:24444426-24443968 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 47

Conread position: 39-513
Cow position: chrX:21494065-21494535 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 47

Conread position: 39-570
Cow position: chrX:24321998-24321463 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 47

Conread position: 41-570
Cow position: chrX:18024361-18023828 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 45

Conread position: 42-237
Cow position: chrX:31972489-31972304 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 42-525
Cow position: chrX:40070970-40070473 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 20

Conread position: 45-429
Cow position: chrX:30286046-30286441 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 41

Conread position: 45-570
Cow position: chrX:38962214-38961686 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 56

Conread position: 46-281
Cow position: chrX:45375091-45374875 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 198, 54

Conread position: 54-500
Cow position: chrX:25818170-25817711 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 32

Conread position: 57-564
Cow position: chrX:5290037-5289526 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 43

Conread position: 60-570
Cow position: chrX:24345699-24346213 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 26

Conread position: 63-570
Cow position: chrX:34221433-34221929 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 23

Conread position: 73-570
Cow position: chrX:23573162-23572653 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 456

Conread position: 86-500
Cow position: chrX:15151982-15151557 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 79

Conread position: 87-512
Cow position: chrX:9836583-9837033 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 234

Conread position: 88-570
Cow position: chrX:23342318-23341827 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 18

Conread position: 94-483
Cow position: chrX:11951092-11950681 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 166

Conread position: 94-570
Cow position: chrX:29082754-29083231 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 123

Conread position: 94-570
Cow position: chrX:30135635-30135178 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 27

Conread position: 94-570
Cow position: chrX:38231589-38231103 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 433

Conread position: 97-570
Cow position: chrX:24292985-24292499 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 163

Conread position: 97-571
Cow position: chrX:2047795-2048277 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 91

Conread position: 101-568
Cow position: chrX:29759386-29759850 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 353

Conread position: 124-570
Cow position: chrX:29287704-29288162 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 317

Conread position: 125-570
Cow position: chrX:5375567-5375113 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 201

Conread position: 125-570
Cow position: chrX:20741567-20742017 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 95

Conread position: 125-570
Cow position: chrX:27615522-27615976 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 342

Conread position: 128-570
Cow position: chrX:30200275-30199828 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 126

Conread position: 131-570
Cow position: chrX:9642709-9642268 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 9

Conread position: 134-570
Cow position: chrX:20953250-20953697 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 173

Conread position: 138-570
Cow position: chrX:3650105-3649658 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 269

Conread position: 140-570
Cow position: chrX:24446678-24447118 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 387

Conread position: 141-570
Cow position: chrX:23985976-23986414 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 11

Conread position: 144-570
Cow position: chrX:18193418-18193854 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 382

Conread position: 145-512
Cow position: chrX:15349484-15349094 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 149-570
Cow position: chrX:5365858-5365430 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 150-570
Cow position: chrX:35938325-35937912 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 36

Conread position: 154-570
Cow position: chrX:5647366-5646940 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 371

Conread position: 156-567
Cow position: chrX:36691590-36691994 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 31

Conread position: 158-443
Cow position: chrX:31964672-31964975 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 161-510
Cow position: chrX:29029941-29029585 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 234
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 35

Conread position: 161-570
Cow position: chrX:21414612-21415031 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 349

Conread position: 164-572
Cow position: chrX:6656269-6655854 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 161

Conread position: 165-502
Cow position: chrX:21818699-21818350 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 165-520
Cow position: chrX:22616622-22616245 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 166-512
Cow position: chrX:44193685-44193318 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 15

Conread position: 166-570
Cow position: chrX:34760816-34761230 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 361

Conread position: 167-570
Cow position: chrX:14802068-14801655 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 275

Conread position: 167-570
Cow position: chrX:21685361-21685783 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 369

Conread position: 173-570
Cow position: chrX:6371937-6372344 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 298

Conread position: 173-570
Cow position: chrX:16085901-16085494 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 354

Conread position: 173-570
Cow position: chrX:27451263-27450885 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 71, 38

Conread position: 176-500
Cow position: chrX:25847584-25847919 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 233
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 71, 11

Conread position: 176-570
Cow position: chrX:27758469-27758873 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 351

Conread position: 177-568
Cow position: chrX:38228550-38228155 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 130

Conread position: 179-570
Cow position: chrX:30172943-30172542 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 348

Conread position: 180-559
Cow position: chrX:29849853-29849471 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 44

Conread position: 182-506
Cow position: chrX:28633687-28633341 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 6

Conread position: 182-570
Cow position: chrX:22869586-22869983 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 6

Conread position: 190-570
Cow position: chrX:9228127-9227738 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 275

Conread position: 205-512
Cow position: chrX:8104717-8104389 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 281

Conread position: 206-564
Cow position: chrX:9899546-9899180 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 242

Conread position: 207-506
Cow position: chrX:39556980-39556674 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 61

Conread position: 212-570
Cow position: chrX:6453494-6453861 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 312

Conread position: 213-570
Cow position: chrX:14050396-14050030 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 269
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 31, 303

Conread position: 219-500
Cow position: chrX:34442625-34442324 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 219

Conread position: 230-570
Cow position: chrX:45401188-45400856 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 14, 144

Conread position: 237-570
Cow position: chrX:23452625-23452281 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 43, 280

Conread position: 243-502
Cow position: chrX:16465135-16465415 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 84

Conread position: 243-570
Cow position: chrX:2103233-2103569 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 34, 283

Conread position: 243-570
Cow position: chrX:16087295-16086959 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 251

Conread position: 245-525
Cow position: chrX:15140700-15140398 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 246-529
Cow position: chrX:17890020-17889718 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 157

Conread position: 247-512
Cow position: chrX:37815011-37815296 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 29, 218

Conread position: 247-560
Cow position: chrX:10445581-10445261 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 30, 277

Conread position: 248-570
Cow position: chrX:45374267-45373944 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 5, 233

Conread position: 254-570
Cow position: chrX:17664076-17663752 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 211

Conread position: 257-568
Cow position: chrX:28647427-28647108 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 261-570
Cow position: chrX:36729230-36729548 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 16, 250

Conread position: 264-487
Cow position: chrX:25292227-25291986 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 264-570
Cow position: chrX:25289827-25289515 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 12, 244

Conread position: 274-570
Cow position: chrX:11499911-11499612 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 171

Conread position: 275-528
Cow position: chrX:7177580-7177851 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 9

Conread position: 275-569
Cow position: chrX:40693867-40693566 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 275-570
Cow position: chrX:20674732-20675032 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 247

Conread position: 275-570
Cow position: chrX:29930528-29930228 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 226
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 82, 247

Conread position: 275-570
Cow position: chrX:32643350-32643650 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 228
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 82, 247

Conread position: 276-570
Cow position: chrX:30455751-30455457 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 170

Conread position: 292-564
Cow position: chrX:5334932-5334657 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 160

Conread position: 293-570
Cow position: chrX:8590462-8590746 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 62, 230

Conread position: 294-502
Cow position: chrX:18243876-18244099 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 151

Conread position: 295-570
Cow position: chrX:38852047-38852325 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 151

Conread position: 298-570
Cow position: chrX:10059353-10059629 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 212
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 59, 122

Conread position: 300-561
Cow position: chrX:17994351-17994614 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 27, 23

Conread position: 302-570
Cow position: chrX:17290073-17290344 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 210
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 176

Conread position: 303-512
Cow position: chrX:37404337-37404112 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 213

Conread position: 303-570
Cow position: chrX:33685023-33685295 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 54, 208

Conread position: 344-492
Cow position: chrX:39293540-39293393 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 344-570
Cow position: chrX:1056435-1056222 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 215, 15

Conread position: 346-570
Cow position: chrX:41734230-41734027 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 116, 22

Conread position: 358-549
Cow position: chrX:28766144-28765957 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 365-512
Cow position: chrX:2649379-2649231 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 365-514
Cow position: chrX:32329180-32329329 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 365-516
Cow position: chrX:35024040-35024187 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 365-518
Cow position: chrX:22308595-22308447 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 365-525
Cow position: chrX:40225263-40225102 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 143, 0

Conread position: 365-554
Cow position: chrX:24928371-24928194 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 365-560
Cow position: chrX:22887633-22887815 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 365-564
Cow position: chrX:13205926-13206113 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-569
Cow position: chrX:12310414-12310226 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 365-569
Cow position: chrX:20020552-20020742 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 365-569
Cow position: chrX:29722182-29722395 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 170
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 65, 125

Conread position: 365-570
Cow position: chrX:2500659-2500466 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 134, 0

Conread position: 365-570
Cow position: chrX:3418165-3417972 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:3465103-3464912 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 365-570
Cow position: chrX:3652644-3652831 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 365-570
Cow position: chrX:5280881-5280688 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:9764100-9763907 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:10438934-10438743 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 75

Conread position: 365-570
Cow position: chrX:13031679-13031487 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 150, 0

Conread position: 365-570
Cow position: chrX:14459209-14459003 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 29, 8

Conread position: 365-570
Cow position: chrX:15175578-15175388 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 365-570
Cow position: chrX:22838243-22838436 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:24279888-24280084 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 126

Conread position: 365-570
Cow position: chrX:25573324-25573516 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 365-570
Cow position: chrX:26760597-26760404 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:27095108-27095293 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 365-570
Cow position: chrX:28058293-28058486 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:28503307-28503500 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:29700970-29700779 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 0

Conread position: 365-570
Cow position: chrX:30160018-30159826 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 365-570
Cow position: chrX:32584959-32584767 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 132, 0

Conread position: 365-570
Cow position: chrX:33763116-33763309 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:38150660-38150852 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 365-570
Cow position: chrX:39185144-39185337 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 0

Conread position: 365-570
Cow position: chrX:41791748-41791551 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 54, 143

Conread position: 365-570
Cow position: chrX:46296633-46296825 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 365-571
Cow position: chrX:21750271-21750080 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 105, 0

Conread position: 366-570
Cow position: chrX:12345868-12346060 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 366-570
Cow position: chrX:22118522-22118330 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 366-570
Cow position: chrX:40184045-40184237 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 367-512
Cow position: chrX:2933029-2932884 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 367-524
Cow position: chrX:36839686-36839843 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 30

Conread position: 370-570
Cow position: chrX:18455794-18455606 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 371-506
Cow position: chrX:12465017-12465150 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 373-556
Cow position: chrX:12178653-12178824 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 373-570
Cow position: chrX:39731158-39730973 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 377-570
Cow position: chrX:28867032-28866848 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 387-518
Cow position: chrX:21645795-21645665 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 387-570
Cow position: chrX:4130605-4130423 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 129, 0

Conread position: 392-502
Cow position: chrX:41879921-41879815 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 393-570
Cow position: chrX:44053815-44053982 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 171, 100

Conread position: 397-570
Cow position: chrX:29842175-29842003 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 150, 108

Show alignments to all cow chromosomes.