Cow genome map
Conread name: | rspl25_i21.y1 |
Conread position: | 1-203 |
Cow position: | chr12:10988797-10988596 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 146 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 31 |
Conread position: | 1-224 |
Cow position: | chr12:6186707-6186931 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 159 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 149, 80 |
Conread position: | 1-247 |
Cow position: | chr12:22480567-22480317 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 165, 79 |
Conread position: | 1-247 |
Cow position: | chr12:34176997-34176747 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 172 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-254 |
Cow position: | chr12:31260967-31261223 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 177 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-275 |
Cow position: | chr12:29447248-29446969 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 191 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 131, 42 |
Conread position: | 1-284 |
Cow position: | chr12:13042799-13043091 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 204 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-290 |
Cow position: | chr12:15720124-15720418 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 204 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 140, 80 |
Conread position: | 1-295 |
Cow position: | chr12:36445828-36445527 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 214 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 163, 63 |
Conread position: | 1-298 |
Cow position: | chr12:10164523-10164824 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 208 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 127, 10 |
Conread position: | 1-311 |
Cow position: | chr12:2229013-2228695 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 226 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-316 |
Cow position: | chr12:22979451-22979773 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 224 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 164, 80 |
Conread position: | 1-327 |
Cow position: | chr12:24029040-24029372 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 238 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 162, 80 |
Conread position: | 1-333 |
Cow position: | chr12:10076100-10075763 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-333 |
Cow position: | chr12:21452535-21452876 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-334 |
Cow position: | chr12:15821163-15820831 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 224 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 244, 29 |
Conread position: | 1-367 |
Cow position: | chr12:41337790-41338170 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:61765-62146 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:249878-250251 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 261 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 67, 63 |
Conread position: | 1-368 |
Cow position: | chr12:259172-258791 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:5107500-5107119 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:7674344-7673963 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:11101690-11101310 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:16301896-16302277 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:19155419-19155798 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 258 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 43, 83 |
Conread position: | 1-368 |
Cow position: | chr12:21313989-21314368 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 257 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 131, 82 |
Conread position: | 1-368 |
Cow position: | chr12:21665578-21665197 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:21888600-21888981 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 78 |
Conread position: | 1-368 |
Cow position: | chr12:22202239-22202606 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 264 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:25148176-25148556 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-368 |
Cow position: | chr12:27958083-27958464 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:27994543-27994162 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 263 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 163, 81 |
Conread position: | 1-368 |
Cow position: | chr12:31829007-31829388 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:32758138-32757758 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 12 |
Conread position: | 1-368 |
Cow position: | chr12:33925255-33925636 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr12:36287573-36287951 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-369 |
Cow position: | chr12:21212225-21211844 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 265 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 146, 71 |
Conread position: | 1-369 |
Cow position: | chr12:21250872-21251251 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 261 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 162, 80 |
Conread position: | 1-369 |
Cow position: | chr12:22517412-22517791 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 80 |
Conread position: | 1-371 |
Cow position: | chr12:8841616-8841997 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 89 |
Conread position: | 1-373 |
Cow position: | chr12:10931528-10931142 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 81 |
Conread position: | 1-374 |
Cow position: | chr12:1408277-1407887 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 266 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 73, 275 |
Conread position: | 1-375 |
Cow position: | chr12:23137886-23138273 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-375 |
Cow position: | chr12:48416300-48416689 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 272 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 109, 29 |
Conread position: | 1-376 |
Cow position: | chr12:1056066-1056453 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr12:1405889-1405503 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 78 |
Conread position: | 1-376 |
Cow position: | chr12:5110622-5111006 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 80 |
Conread position: | 1-376 |
Cow position: | chr12:5713409-5713018 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 72 |
Conread position: | 1-376 |
Cow position: | chr12:8839696-8839307 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr12:10359139-10358750 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 81 |
Conread position: | 1-376 |
Cow position: | chr12:12928468-12928852 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 80 |
Conread position: | 1-376 |
Cow position: | chr12:15925311-15925697 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr12:17718741-17718355 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 12 |
Conread position: | 1-376 |
Cow position: | chr12:21611045-21610658 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 56, 66 |
Conread position: | 1-376 |
Cow position: | chr12:22748658-22748269 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-376 |
Cow position: | chr12:31027378-31027766 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr12:32147187-32147573 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 77 |
Conread position: | 1-376 |
Cow position: | chr12:35547693-35548072 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 276 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 163, 19 |
Conread position: | 1-376 |
Cow position: | chr12:37562446-37562064 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 262 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 146, 53 |
Conread position: | 1-376 |
Cow position: | chr12:39930607-39930223 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 80 |
Conread position: | 1-376 |
Cow position: | chr12:46111675-46112063 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 80 |
Conread position: | 2-286 |
Cow position: | chr12:12177800-12178080 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 157, 81 |
Conread position: | 2-334 |
Cow position: | chr12:28571817-28571485 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 225 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 206, 64 |
Conread position: | 2-368 |
Cow position: | chr12:32339815-32340195 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 79 |
Conread position: | 2-376 |
Cow position: | chr12:42604743-42605121 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 25 |
Conread position: | 3-327 |
Cow position: | chr12:36213718-36213386 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 232 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 144, 78 |
Conread position: | 3-362 |
Cow position: | chr12:19198474-19198111 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 73 |
Conread position: | 3-367 |
Cow position: | chr12:27506209-27506587 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 78 |
Conread position: | 3-368 |
Cow position: | chr12:1007456-1007077 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 35 |
Conread position: | 3-369 |
Cow position: | chr12:21484842-21484472 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 252 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 183, 75 |
Conread position: | 3-376 |
Cow position: | chr12:8136548-8136934 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 257 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 65, 59 |
Conread position: | 3-376 |
Cow position: | chr12:8774104-8773720 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 265 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 47, 56 |
Conread position: | 3-376 |
Cow position: | chr12:25313273-25313659 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 260 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 144, 80 |
Conread position: | 3-376 |
Cow position: | chr12:43681445-43681059 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 76 |
Conread position: | 7-362 |
Cow position: | chr12:3094186-3094564 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 273 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 110, 72 |
Conread position: | 7-376 |
Cow position: | chr12:9988251-9988632 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 267 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 135, 72 |
Conread position: | 7-376 |
Cow position: | chr12:32011341-32011724 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 266 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 157, 74 |
Conread position: | 8-376 |
Cow position: | chr12:2242555-2242930 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 262 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 151, 47 |
Conread position: | 18-366 |
Cow position: | chr12:27435736-27436081 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 245 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 146, 35 |
Conread position: | 18-373 |
Cow position: | chr12:19871639-19871271 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 248 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 99, 65 |
Conread position: | 26-376 |
Cow position: | chr12:14423767-14423404 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 55 |
Conread position: | 35-334 |
Cow position: | chr12:23378537-23378232 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 210 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 28 |
Conread position: | 39-376 |
Cow position: | chr12:27929387-27929737 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 243 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 18, 28 |
Conread position: | 76-367 |
Cow position: | chr12:35367772-35367468 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 204 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 77-376 |
Cow position: | chr12:6105983-6106294 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 224 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 17, 134 |
Conread position: | 83-376 |
Cow position: | chr12:47803524-47803226 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 50 |
Conread position: | 93-368 |
Cow position: | chr12:8674712-8675004 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 205 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 93-368 |
Cow position: | chr12:42232664-42232371 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 94-369 |
Cow position: | chr12:40306652-40306359 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 219 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.