Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 162, 80

Conread position: 1-239
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 52

Conread position: 1-247
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 163, 80

Conread position: 1-248
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 73

Conread position: 1-264
Cow position:
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 80

Conread position: 1-267
Cow position:
Alignm length: 281
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 163, 80

Conread position: 1-268
Cow position:
Alignm length: 281
Alignm identity: 189
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 146, 80

Conread position: 1-275
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 163, 80

Conread position: 1-281
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 163, 80

Conread position: 1-293
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position:
Alignm length: 314
Alignm identity: 218
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 131, 80

Conread position: 1-299
Cow position:
Alignm length: 312
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 62

Conread position: 1-310
Cow position:
Alignm length: 324
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 163, 80

Conread position: 1-316
Cow position:
Alignm length: 329
Alignm identity: 217
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 163, 54

Conread position: 1-317
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 208, 82

Conread position: 1-317
Cow position:
Alignm length: 325
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 185, 82

Conread position: 1-328
Cow position:
Alignm length: 341
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 63

Conread position: 1-342
Cow position:
Alignm length: 347
Alignm identity: 240
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 323, 65

Conread position: 1-346
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-351
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-357
Cow position:
Alignm length: 375
Alignm identity: 255
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 203, 88

Conread position: 1-364
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 46, 54

Conread position: 1-366
Cow position:
Alignm length: 384
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 78

Conread position: 1-366
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 1-366
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 23

Conread position: 1-367
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 80

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 163, 18

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 50

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 64

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 389
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 163, 82

Conread position: 1-368
Cow position:
Alignm length: 388
Alignm identity: 247
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 60

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 79

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-368
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 402
Alignm identity: 272
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 78

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 162, 73

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-369
Cow position:
Alignm length: 382
Alignm identity: 248
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 129, 61

Conread position: 1-369
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 78

Conread position: 1-370
Cow position:
Alignm length: 382
Alignm identity: 259
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 158, 25

Conread position: 1-374
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 81

Conread position: 1-374
Cow position:
Alignm length: 382
Alignm identity: 253
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 211, 25

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 20

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 79

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 26

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 146, 18

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 46

Conread position: 2-368
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 79

Conread position: 2-375
Cow position:
Alignm length: 394
Alignm identity: 255
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 162, 81

Conread position: 2-376
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 62

Conread position: 3-290
Cow position:
Alignm length: 304
Alignm identity: 201
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 90

Conread position: 3-308
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 138, 78

Conread position: 3-313
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 173, 50

Conread position: 3-327
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 18

Conread position: 3-327
Cow position:
Alignm length: 331
Alignm identity: 212
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 183, 75

Conread position: 3-347
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 161, 78

Conread position: 3-369
Cow position:
Alignm length: 380
Alignm identity: 240
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 127, 88

Conread position: 3-374
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 144, 77

Conread position: 3-376
Cow position:
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 3-376
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 78

Conread position: 3-376
Cow position:
Alignm length: 400
Alignm identity: 272
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 129, 77

Conread position: 3-376
Cow position:
Alignm length: 397
Alignm identity: 264
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 93, 60

Conread position: 3-376
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 24

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 260
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 144, 75

Conread position: 7-207
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 82

Conread position: 7-246
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 71

Conread position: 7-373
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 157, 73

Conread position: 7-376
Cow position:
Alignm length: 375
Alignm identity: 250
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 197, 76

Conread position: 7-376
Cow position:
Alignm length: 395
Alignm identity: 267
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 102, 71

Conread position: 8-369
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 139, 74

Conread position: 8-376
Cow position:
Alignm length: 381
Alignm identity: 251
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 151, 70

Conread position: 8-376
Cow position:
Alignm length: 379
Alignm identity: 244
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 156, 70

Conread position: 9-368
Cow position:
Alignm length: 379
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 72

Conread position: 12-338
Cow position:
Alignm length: 340
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 152, 69

Conread position: 15-359
Cow position:
Alignm length: 360
Alignm identity: 230
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 153, 47

Conread position: 18-368
Cow position:
Alignm length: 369
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 63

Conread position: 31-376
Cow position:
Alignm length: 364
Alignm identity: 258
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 33

Conread position: 35-368
Cow position:
Alignm length: 347
Alignm identity: 230
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 43

Conread position: 76-376
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 20, 69

Conread position: 77-368
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 17, 116

Conread position: 80-348
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 93-368
Cow position:
Alignm length: 295
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 99

Conread position: 93-376
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 293

Show alignments to all cow chromosomes.