Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 146, 74

Conread position: 1-239
Cow position:
Alignm length: 246
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 60

Conread position: 1-239
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 163, 89

Conread position: 1-249
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 203, 78

Conread position: 1-268
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 80

Conread position: 1-270
Cow position:
Alignm length: 283
Alignm identity: 198
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 163, 12

Conread position: 1-274
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 163, 63

Conread position: 1-275
Cow position:
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 187, 80

Conread position: 1-279
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 146, 80

Conread position: 1-299
Cow position:
Alignm length: 313
Alignm identity: 216
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 66

Conread position: 1-300
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 80

Conread position: 1-300
Cow position:
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 82

Conread position: 1-314
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 163, 80

Conread position: 1-317
Cow position:
Alignm length: 331
Alignm identity: 233
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 163, 80

Conread position: 1-317
Cow position:
Alignm length: 331
Alignm identity: 237
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-322
Cow position:
Alignm length: 334
Alignm identity: 226
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 146, 33

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-334
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 56

Conread position: 1-351
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-357
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 50

Conread position: 1-359
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-367
Cow position:
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 82

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 50

Conread position: 1-368
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 55, 81

Conread position: 1-368
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 297

Conread position: 1-368
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 376
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 80

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 162, 6

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 380
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-370
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 73

Conread position: 1-371
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-371
Cow position:
Alignm length: 387
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 77

Conread position: 1-374
Cow position:
Alignm length: 398
Alignm identity: 275
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 52, 38

Conread position: 1-375
Cow position:
Alignm length: 384
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 77

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-375
Cow position:
Alignm length: 389
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 29

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 78

Conread position: 1-375
Cow position:
Alignm length: 390
Alignm identity: 265
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 163, 90

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 66

Conread position: 1-376
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 32, 10

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 60

Conread position: 1-376
Cow position:
Alignm length: 398
Alignm identity: 259
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 226

Conread position: 1-376
Cow position:
Alignm length: 399
Alignm identity: 275
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 146, 56

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 10

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 397
Alignm identity: 255
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 17

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 37

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 274
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 147, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 62

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 80

Conread position: 1-376
Cow position:
Alignm length: 389
Alignm identity: 257
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 164, 75

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 23

Conread position: 1-376
Cow position:
Alignm length: 386
Alignm identity: 254
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 128, 77

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 267
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 147, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 265
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 140, 78

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 19

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 63

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 263
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 185, 63

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 2-368
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 79

Conread position: 2-376
Cow position:
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 79

Conread position: 3-265
Cow position:
Alignm length: 274
Alignm identity: 189
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 62

Conread position: 3-317
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 149, 79

Conread position: 3-337
Cow position:
Alignm length: 342
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 201, 54

Conread position: 3-346
Cow position:
Alignm length: 358
Alignm identity: 247
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 156, 78

Conread position: 3-362
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 93, 50

Conread position: 3-368
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 78

Conread position: 3-368
Cow position:
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 78

Conread position: 3-368
Cow position:
Alignm length: 398
Alignm identity: 270
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 161, 78

Conread position: 3-368
Cow position:
Alignm length: 385
Alignm identity: 260
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 60

Conread position: 3-370
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 72

Conread position: 3-373
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 78

Conread position: 3-374
Cow position:
Alignm length: 390
Alignm identity: 266
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 161, 76

Conread position: 3-375
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 80

Conread position: 3-376
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 161, 78

Conread position: 3-376
Cow position:
Alignm length: 397
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 144, 78

Conread position: 3-376
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 61

Conread position: 3-376
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 161, 75

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 165, 72

Conread position: 4-376
Cow position:
Alignm length: 383
Alignm identity: 258
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 78

Conread position: 5-376
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 50

Conread position: 7-362
Cow position:
Alignm length: 374
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 145, 76

Conread position: 7-368
Cow position:
Alignm length: 380
Alignm identity: 263
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 145, 74

Conread position: 7-370
Cow position:
Alignm length: 384
Alignm identity: 260
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 134, 70

Conread position: 7-376
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 76

Conread position: 7-376
Cow position:
Alignm length: 389
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 48

Conread position: 7-376
Cow position:
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 74

Conread position: 8-323
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 74

Conread position: 9-326
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 74

Conread position: 14-253
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 43

Conread position: 18-376
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 134, 63

Conread position: 21-369
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 60

Conread position: 26-374
Cow position:
Alignm length: 369
Alignm identity: 250
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 70, 38

Conread position: 26-376
Cow position:
Alignm length: 362
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 55

Conread position: 28-369
Cow position:
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 66

Conread position: 30-254
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 53

Conread position: 35-366
Cow position:
Alignm length: 349
Alignm identity: 239
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 129, 29

Conread position: 68-376
Cow position:
Alignm length: 330
Alignm identity: 229
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 27, 235

Conread position: 76-351
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 20, 117

Conread position: 76-376
Cow position:
Alignm length: 318
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 18, 124

Conread position: 94-317
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 98

Conread position: 95-367
Cow position:
Alignm length: 288
Alignm identity: 204
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 60, 246

Show alignments to all cow chromosomes.