Cow genome map
Conread name: | rspl25_i21.y1 |
Conread position: | 1-150 |
Cow position: | chr20:40423817-40423961 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 1-162 |
Cow position: | chr20:35036868-35037025 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 1-183 |
Cow position: | chr20:5077465-5077290 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 104, 81 |
Conread position: | 1-268 |
Cow position: | chr20:14877570-14877296 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 203 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 145, 50 |
Conread position: | 1-292 |
Cow position: | chr20:20935625-20935918 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 207 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 185, 74 |
Conread position: | 1-299 |
Cow position: | chr20:33246801-33247100 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 212 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 203, 25 |
Conread position: | 1-302 |
Cow position: | chr20:28165354-28165051 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 206 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 131, 80 |
Conread position: | 1-325 |
Cow position: | chr20:11331162-11331495 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-327 |
Cow position: | chr20:40256174-40255841 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 226 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 158, 82 |
Conread position: | 1-334 |
Cow position: | chr20:3782191-3782534 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 77 |
Conread position: | 1-350 |
Cow position: | chr20:9589290-9588925 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 249 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 151, 95 |
Conread position: | 1-367 |
Cow position: | chr20:10405206-10404829 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 255 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:5503235-5503616 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:6550486-6550867 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:7597350-7597726 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 269 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 163, 20 |
Conread position: | 1-368 |
Cow position: | chr20:9223364-9222983 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:10921414-10921791 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:13303786-13304167 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:15295529-15295151 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 53 |
Conread position: | 1-368 |
Cow position: | chr20:16559020-16559401 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:17657720-17658101 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 80 |
Conread position: | 1-368 |
Cow position: | chr20:22048878-22048497 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:23466138-23466519 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 26 |
Conread position: | 1-368 |
Cow position: | chr20:24399353-24399734 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 77 |
Conread position: | 1-368 |
Cow position: | chr20:26738289-26737908 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-368 |
Cow position: | chr20:27876995-27876612 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 272 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 158, 47 |
Conread position: | 1-369 |
Cow position: | chr20:12567808-12568186 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-371 |
Cow position: | chr20:13653830-13654202 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 257 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 203, 14 |
Conread position: | 1-371 |
Cow position: | chr20:19364372-19364752 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 85 |
Conread position: | 1-372 |
Cow position: | chr20:4205161-4204780 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 78 |
Conread position: | 1-373 |
Cow position: | chr20:14756744-14757144 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 281 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 78, 53 |
Conread position: | 1-375 |
Cow position: | chr20:753953-753565 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:6135479-6135866 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:8445924-8445537 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 79 |
Conread position: | 1-376 |
Cow position: | chr20:10035238-10035610 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 258 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 203, 72 |
Conread position: | 1-376 |
Cow position: | chr20:12333187-12332808 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 270 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 132, 52 |
Conread position: | 1-376 |
Cow position: | chr20:12434888-12435274 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:13660833-13661221 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 258 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 9, 42 |
Conread position: | 1-376 |
Cow position: | chr20:14925130-14925518 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:15068330-15067938 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 276 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 24, 66 |
Conread position: | 1-376 |
Cow position: | chr20:19017900-19018280 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 260 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 140, 74 |
Conread position: | 1-376 |
Cow position: | chr20:20439457-20439846 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-376 |
Cow position: | chr20:21398329-21397943 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 89 |
Conread position: | 1-376 |
Cow position: | chr20:22060665-22061053 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:24567760-24568145 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 80 |
Conread position: | 1-376 |
Cow position: | chr20:24904032-24904420 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 82 |
Conread position: | 1-376 |
Cow position: | chr20:25658511-25658899 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 73 |
Conread position: | 1-376 |
Cow position: | chr20:26052841-26053229 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:27994013-27994402 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 88 |
Conread position: | 1-376 |
Cow position: | chr20:30146943-30146559 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 78 |
Conread position: | 1-376 |
Cow position: | chr20:30384733-30385121 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 35 |
Conread position: | 1-376 |
Cow position: | chr20:30431791-30431396 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 273 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 79, 313 |
Conread position: | 1-376 |
Cow position: | chr20:31504845-31504454 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 1-376 |
Cow position: | chr20:34231358-34231732 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 80 |
Conread position: | 1-376 |
Cow position: | chr20:35159079-35159458 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 80 |
Conread position: | 1-376 |
Cow position: | chr20:37154454-37154843 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 80 |
Conread position: | 3-162 |
Cow position: | chr20:33731263-33731109 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 118 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 3-286 |
Cow position: | chr20:27000005-26999714 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 199 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 165, 80 |
Conread position: | 3-309 |
Cow position: | chr20:32084930-32085259 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 3-322 |
Cow position: | chr20:28113492-28113172 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 223 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 147, 80 |
Conread position: | 3-368 |
Cow position: | chr20:30479619-30479240 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 78 |
Conread position: | 3-369 |
Cow position: | chr20:12047989-12047624 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 256 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 201, 80 |
Conread position: | 3-375 |
Cow position: | chr20:13050048-13050447 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 272 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 154, 60 |
Conread position: | 3-375 |
Cow position: | chr20:14210868-14211253 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 256 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 74, 378 |
Conread position: | 3-375 |
Cow position: | chr20:28443839-28444223 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 269 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 144, 78 |
Conread position: | 3-376 |
Cow position: | chr20:775168-774782 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 78 |
Conread position: | 3-376 |
Cow position: | chr20:7568463-7568841 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 265 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 131, 70 |
Conread position: | 3-376 |
Cow position: | chr20:7592949-7593328 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 263 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 131, 87 |
Conread position: | 3-376 |
Cow position: | chr20:13955134-13954754 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 270 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 129, 61 |
Conread position: | 4-252 |
Cow position: | chr20:18322055-18322299 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 180 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 143, 57 |
Conread position: | 7-310 |
Cow position: | chr20:7995037-7995349 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 216 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 152, 71 |
Conread position: | 8-246 |
Cow position: | chr20:26076061-26075820 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 137, 81 |
Conread position: | 8-368 |
Cow position: | chr20:30689378-30689006 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 263 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 139, 71 |
Conread position: | 12-376 |
Cow position: | chr20:20731759-20731383 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 258 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 147, 66 |
Conread position: | 15-376 |
Cow position: | chr20:34643507-34643141 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 66 |
Conread position: | 26-368 |
Cow position: | chr20:5085850-5086206 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 55 |
Conread position: | 27-376 |
Cow position: | chr20:13506076-13506434 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 254 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 120, 54 |
Conread position: | 31-373 |
Cow position: | chr20:34968465-34968108 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 245 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 116, 51 |
Conread position: | 37-376 |
Cow position: | chr20:3808297-3808649 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 44 |
Conread position: | 38-375 |
Cow position: | chr20:6053877-6054230 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 252 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 58, 131 |
Conread position: | 39-368 |
Cow position: | chr20:30579337-30578994 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 248 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 120, 42 |
Conread position: | 70-368 |
Cow position: | chr20:13024884-13025198 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 209 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 60, 23 |
Conread position: | 73-371 |
Cow position: | chr20:9410809-9410492 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 65 |
Conread position: | 75-367 |
Cow position: | chr20:9996981-9996666 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 220 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 22, 47 |
Conread position: | 76-374 |
Cow position: | chr20:39284602-39284308 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 203 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 32, 44 |
Conread position: | 76-376 |
Cow position: | chr20:35093979-35093662 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 217 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 18, 154 |
Conread position: | 77-376 |
Cow position: | chr20:8970452-8970769 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 224 |
Alignm E-value: | 9e-39 |
Alignm gaps (pig, cow): | 17, 309 |
Conread position: | 84-327 |
Cow position: | chr20:12155927-12156178 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 12, 230 |
Conread position: | 93-368 |
Cow position: | chr20:10790878-10790587 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 213 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 71, 54 |
Conread position: | 93-376 |
Cow position: | chr20:7810418-7810716 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 218 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 54, 146 |
Show alignments to all cow chromosomes.