Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 1-183
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 81

Conread position: 1-268
Cow position:
Alignm length: 281
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 145, 50

Conread position: 1-292
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 185, 74

Conread position: 1-299
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 203, 25

Conread position: 1-302
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 131, 80

Conread position: 1-325
Cow position:
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-327
Cow position:
Alignm length: 340
Alignm identity: 226
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 158, 82

Conread position: 1-334
Cow position:
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 77

Conread position: 1-350
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 151, 95

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 255
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 163, 20

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 53

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 26

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 77

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 158, 47

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-371
Cow position:
Alignm length: 381
Alignm identity: 257
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 203, 14

Conread position: 1-371
Cow position:
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 85

Conread position: 1-372
Cow position:
Alignm length: 386
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 78

Conread position: 1-373
Cow position:
Alignm length: 403
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 53

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 258
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 203, 72

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 52

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 258
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 42

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 398
Alignm identity: 276
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 24, 66

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 140, 74

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 89

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 82

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 88

Conread position: 1-376
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 78

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 35

Conread position: 1-376
Cow position:
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 313

Conread position: 1-376
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 390
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 1-376
Cow position:
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 3-286
Cow position:
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 165, 80

Conread position: 3-309
Cow position:
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 3-322
Cow position:
Alignm length: 328
Alignm identity: 223
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 147, 80

Conread position: 3-368
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 78

Conread position: 3-369
Cow position:
Alignm length: 379
Alignm identity: 256
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 201, 80

Conread position: 3-375
Cow position:
Alignm length: 409
Alignm identity: 272
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 154, 60

Conread position: 3-375
Cow position:
Alignm length: 387
Alignm identity: 256
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 378

Conread position: 3-375
Cow position:
Alignm length: 391
Alignm identity: 269
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 144, 78

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 3-376
Cow position:
Alignm length: 387
Alignm identity: 265
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 131, 70

Conread position: 3-376
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 131, 87

Conread position: 3-376
Cow position:
Alignm length: 391
Alignm identity: 270
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 129, 61

Conread position: 4-252
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 143, 57

Conread position: 7-310
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 152, 71

Conread position: 8-246
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 81

Conread position: 8-368
Cow position:
Alignm length: 381
Alignm identity: 263
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 139, 71

Conread position: 12-376
Cow position:
Alignm length: 383
Alignm identity: 258
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 66

Conread position: 15-376
Cow position:
Alignm length: 374
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 66

Conread position: 26-368
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 27-376
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 120, 54

Conread position: 31-373
Cow position:
Alignm length: 362
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 116, 51

Conread position: 37-376
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 44

Conread position: 38-375
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 131

Conread position: 39-368
Cow position:
Alignm length: 349
Alignm identity: 248
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 42

Conread position: 70-368
Cow position:
Alignm length: 319
Alignm identity: 209
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 23

Conread position: 73-371
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 65

Conread position: 75-367
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 47

Conread position: 76-374
Cow position:
Alignm length: 307
Alignm identity: 203
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 32, 44

Conread position: 76-376
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 18, 154

Conread position: 77-376
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 17, 309

Conread position: 84-327
Cow position:
Alignm length: 254
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 230

Conread position: 93-368
Cow position:
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 71, 54

Conread position: 93-376
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 54, 146

Show alignments to all cow chromosomes.