Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 66

Conread position: 1-207
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 46

Conread position: 1-224
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 146, 82

Conread position: 1-237
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 163, 80

Conread position: 1-268
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 163, 80

Conread position: 1-277
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 80

Conread position: 1-278
Cow position:
Alignm length: 283
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 240, 26

Conread position: 1-280
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 77

Conread position: 1-291
Cow position:
Alignm length: 297
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 90

Conread position: 1-299
Cow position:
Alignm length: 313
Alignm identity: 221
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 71, 63

Conread position: 1-300
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 138, 90

Conread position: 1-303
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 151, 75

Conread position: 1-317
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 181, 78

Conread position: 1-325
Cow position:
Alignm length: 338
Alignm identity: 231
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 163, 80

Conread position: 1-327
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 146, 77

Conread position: 1-327
Cow position:
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 33

Conread position: 1-327
Cow position:
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-328
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 77

Conread position: 1-329
Cow position:
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 1-331
Cow position:
Alignm length: 341
Alignm identity: 219
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 161, 32

Conread position: 1-333
Cow position:
Alignm length: 341
Alignm identity: 229
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 163, 80

Conread position: 1-346
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 146, 82

Conread position: 1-359
Cow position:
Alignm length: 372
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 206, 5

Conread position: 1-363
Cow position:
Alignm length: 375
Alignm identity: 257
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 165, 82

Conread position: 1-365
Cow position:
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 63

Conread position: 1-367
Cow position:
Alignm length: 387
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 384
Alignm identity: 264
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 163, 63

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 391
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 80

Conread position: 1-369
Cow position:
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 52

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 75

Conread position: 1-369
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 14

Conread position: 1-371
Cow position:
Alignm length: 389
Alignm identity: 272
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 75

Conread position: 1-373
Cow position:
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 1-374
Cow position:
Alignm length: 395
Alignm identity: 262
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 83

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 270
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 142, 63

Conread position: 1-376
Cow position:
Alignm length: 401
Alignm identity: 276
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 164, 26

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 19

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 255
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 62

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 77

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 26

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 82

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 82

Conread position: 1-376
Cow position:
Alignm length: 389
Alignm identity: 267
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 186, 17

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 163, 63

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 50

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 269
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 146, 63

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 203, 63

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 65

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 19

Conread position: 1-376
Cow position:
Alignm length: 407
Alignm identity: 270
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 81

Conread position: 1-376
Cow position:
Alignm length: 386
Alignm identity: 260
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 163, 65

Conread position: 2-253
Cow position:
Alignm length: 264
Alignm identity: 181
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 141, 62

Conread position: 2-264
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 7, 52

Conread position: 2-376
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 79

Conread position: 3-159
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 3-245
Cow position:
Alignm length: 246
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 160, 74

Conread position: 3-253
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 144, 75

Conread position: 3-272
Cow position:
Alignm length: 281
Alignm identity: 194
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 144, 78

Conread position: 3-293
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 187, 75

Conread position: 3-321
Cow position:
Alignm length: 332
Alignm identity: 230
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 128, 78

Conread position: 3-323
Cow position:
Alignm length: 337
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 129, 80

Conread position: 3-331
Cow position:
Alignm length: 341
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 75

Conread position: 3-339
Cow position:
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 123, 80

Conread position: 3-362
Cow position:
Alignm length: 379
Alignm identity: 244
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 127, 60

Conread position: 3-365
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 140, 50

Conread position: 3-365
Cow position:
Alignm length: 374
Alignm identity: 233
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 174, 60

Conread position: 3-367
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 3-369
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 144, 80

Conread position: 3-369
Cow position:
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 72

Conread position: 3-370
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 74

Conread position: 3-376
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 88

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 268
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 140, 78

Conread position: 3-376
Cow position:
Alignm length: 393
Alignm identity: 268
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 140, 76

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 78

Conread position: 5-183
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 54

Conread position: 7-239
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 121, 72

Conread position: 7-284
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 140, 32

Conread position: 7-286
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 152, 72

Conread position: 7-326
Cow position:
Alignm length: 329
Alignm identity: 231
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 140, 50

Conread position: 7-350
Cow position:
Alignm length: 360
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 59

Conread position: 7-368
Cow position:
Alignm length: 370
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 202, 71

Conread position: 7-368
Cow position:
Alignm length: 379
Alignm identity: 254
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 159, 71

Conread position: 7-374
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 76

Conread position: 7-374
Cow position:
Alignm length: 378
Alignm identity: 256
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 240, 19

Conread position: 7-376
Cow position:
Alignm length: 382
Alignm identity: 263
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 51

Conread position: 7-376
Cow position:
Alignm length: 388
Alignm identity: 248
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 132, 48

Conread position: 7-376
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 53

Conread position: 8-376
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 32, 74

Conread position: 9-334
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 138, 69

Conread position: 9-368
Cow position:
Alignm length: 376
Alignm identity: 257
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 72

Conread position: 9-368
Cow position:
Alignm length: 376
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 72

Conread position: 15-376
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 66

Conread position: 18-334
Cow position:
Alignm length: 330
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 35

Conread position: 21-376
Cow position:
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 60

Conread position: 26-375
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 52

Conread position: 30-214
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 117, 53

Conread position: 31-368
Cow position:
Alignm length: 350
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 173, 50

Conread position: 38-333
Cow position:
Alignm length: 310
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 126, 43

Conread position: 73-376
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 209

Conread position: 76-376
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 310

Conread position: 83-376
Cow position:
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 93-368
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 93-376
Cow position:
Alignm length: 303
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 71, 99

Conread position: 96-374
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 286

Show alignments to all cow chromosomes.