Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 1-172
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 146, 82

Conread position: 1-194
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 146, 77

Conread position: 1-204
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 146, 78

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 146, 78

Conread position: 1-240
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 163, 80

Conread position: 1-262
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 163, 80

Conread position: 1-263
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 163, 80

Conread position: 1-282
Cow position:
Alignm length: 295
Alignm identity: 204
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 151, 82

Conread position: 1-283
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 163, 80

Conread position: 1-286
Cow position:
Alignm length: 300
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 146, 80

Conread position: 1-287
Cow position:
Alignm length: 300
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position:
Alignm length: 311
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 80

Conread position: 1-303
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 163, 80

Conread position: 1-308
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 131, 80

Conread position: 1-308
Cow position:
Alignm length: 321
Alignm identity: 223
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 163, 20

Conread position: 1-325
Cow position:
Alignm length: 339
Alignm identity: 239
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 80

Conread position: 1-326
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 33

Conread position: 1-327
Cow position:
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 82

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-334
Cow position:
Alignm length: 348
Alignm identity: 228
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 62

Conread position: 1-337
Cow position:
Alignm length: 349
Alignm identity: 231
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 163, 76

Conread position: 1-342
Cow position:
Alignm length: 355
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-349
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 79

Conread position: 1-362
Cow position:
Alignm length: 384
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 68

Conread position: 1-363
Cow position:
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-367
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 80

Conread position: 1-367
Cow position:
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 27

Conread position: 1-367
Cow position:
Alignm length: 380
Alignm identity: 244
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 127, 60

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 63

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 25

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 77

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 146, 55

Conread position: 1-371
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 56

Conread position: 1-371
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-371
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-373
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-373
Cow position:
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 63

Conread position: 1-374
Cow position:
Alignm length: 382
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 77

Conread position: 1-374
Cow position:
Alignm length: 393
Alignm identity: 266
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 79

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-375
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 138, 60

Conread position: 1-376
Cow position:
Alignm length: 407
Alignm identity: 276
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 390
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 397
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 12

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 81

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 70

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 78

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 80

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 104

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 263
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 21, 65

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 260
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 141, 62

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 54

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 165, 30

Conread position: 1-376
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 82

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 65

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 77

Conread position: 2-368
Cow position:
Alignm length: 381
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 78

Conread position: 3-287
Cow position:
Alignm length: 301
Alignm identity: 222
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 78

Conread position: 3-287
Cow position:
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 75

Conread position: 3-297
Cow position:
Alignm length: 313
Alignm identity: 212
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 126, 24

Conread position: 3-327
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 144, 46

Conread position: 3-350
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 183, 61

Conread position: 3-368
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 161, 72

Conread position: 3-368
Cow position:
Alignm length: 381
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 74

Conread position: 3-369
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 130, 78

Conread position: 3-371
Cow position:
Alignm length: 381
Alignm identity: 241
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 127, 80

Conread position: 3-371
Cow position:
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 88

Conread position: 3-376
Cow position:
Alignm length: 394
Alignm identity: 273
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 69, 61

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 77

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 252
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 56

Conread position: 3-376
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 201, 80

Conread position: 3-376
Cow position:
Alignm length: 393
Alignm identity: 262
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 129, 12

Conread position: 4-303
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 130, 79

Conread position: 7-239
Cow position:
Alignm length: 236
Alignm identity: 172
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 189, 76

Conread position: 7-350
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 152, 76

Conread position: 7-373
Cow position:
Alignm length: 385
Alignm identity: 254
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 91, 9

Conread position: 8-272
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 13

Conread position: 8-374
Cow position:
Alignm length: 382
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 160, 55

Conread position: 12-376
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 131, 67

Conread position: 26-376
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 55

Conread position: 31-362
Cow position:
Alignm length: 341
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 22

Conread position: 39-246
Cow position:
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 39

Conread position: 77-298
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 206

Conread position: 78-363
Cow position:
Alignm length: 298
Alignm identity: 193
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 168

Conread position: 78-367
Cow position:
Alignm length: 310
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 207

Conread position: 78-370
Cow position:
Alignm length: 314
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 109

Conread position: 79-304
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 15

Show alignments to all cow chromosomes.