Cow genome map
| Conread name: | rspl25_i21.y1 |
| Conread position: | 1-227 |
| Cow position: | chr26:30725429-30725660 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 147, 80 |
| Conread position: | 1-247 |
| Cow position: | chr26:20019589-20019339 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-247 |
| Cow position: | chr26:26611944-26611694 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-280 |
| Cow position: | chr26:22831551-22831836 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 162, 42 |
| Conread position: | 1-290 |
| Cow position: | chr26:18928763-18928472 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 197, 80 |
| Conread position: | 1-295 |
| Cow position: | chr26:6430071-6429771 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 165, 63 |
| Conread position: | 1-295 |
| Cow position: | chr26:13773539-13773238 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 160, 82 |
| Conread position: | 1-307 |
| Cow position: | chr26:12662254-12662558 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 1-327 |
| Cow position: | chr26:6843732-6844067 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 149, 80 |
| Conread position: | 1-333 |
| Cow position: | chr26:3564551-3564893 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 241 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-333 |
| Cow position: | chr26:20256111-20255780 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 1-334 |
| Cow position: | chr26:14173551-14173219 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 90 |
| Conread position: | 1-337 |
| Cow position: | chr26:624729-625066 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 165, 62 |
| Conread position: | 1-339 |
| Cow position: | chr26:15145982-15145634 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-348 |
| Cow position: | chr26:4324233-4324578 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 52 |
| Conread position: | 1-352 |
| Cow position: | chr26:7559128-7559493 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-362 |
| Cow position: | chr26:9835959-9835580 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 82 |
| Conread position: | 1-366 |
| Cow position: | chr26:3833522-3833143 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 1-368 |
| Cow position: | chr26:1342807-1343186 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr26:5680020-5679637 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr26:28706575-28706951 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 26 |
| Conread position: | 1-368 |
| Cow position: | chr26:35121755-35122135 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 26 |
| Conread position: | 1-374 |
| Cow position: | chr26:10699024-10699394 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 1-375 |
| Cow position: | chr26:46162-46550 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 23, 79 |
| Conread position: | 1-375 |
| Cow position: | chr26:17182549-17182191 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 259 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 146, 63 |
| Conread position: | 1-375 |
| Cow position: | chr26:34265452-34265065 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:1346506-1346894 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:3230954-3230568 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 163, 87 |
| Conread position: | 1-376 |
| Cow position: | chr26:4440278-4440653 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 79 |
| Conread position: | 1-376 |
| Cow position: | chr26:8084314-8083926 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:8738929-8739316 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:8885331-8884944 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:13183798-13183411 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:13806541-13806925 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 270 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 163, 43 |
| Conread position: | 1-376 |
| Cow position: | chr26:16781663-16781284 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 90 |
| Conread position: | 1-376 |
| Cow position: | chr26:17393411-17393795 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 1-376 |
| Cow position: | chr26:20497018-20496630 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 203, 82 |
| Conread position: | 1-376 |
| Cow position: | chr26:22691874-22691490 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 50 |
| Conread position: | 1-376 |
| Cow position: | chr26:23889895-23889511 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 272 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 1-376 |
| Cow position: | chr26:30594141-30594529 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr26:34015325-34014934 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 1-376 |
| Cow position: | chr26:35191060-35191447 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 1-376 |
| Cow position: | chr26:35560575-35560961 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 2-303 |
| Cow position: | chr26:24239186-24238883 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 76 |
| Conread position: | 3-273 |
| Cow position: | chr26:8308267-8308555 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 54, 126 |
| Conread position: | 3-375 |
| Cow position: | chr26:26238485-26238103 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 267 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 3-376 |
| Cow position: | chr26:1390468-1390084 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 3-376 |
| Cow position: | chr26:14487775-14488154 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 78 |
| Conread position: | 3-376 |
| Cow position: | chr26:17428989-17429375 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 4-368 |
| Cow position: | chr26:3537607-3537229 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 77 |
| Conread position: | 7-225 |
| Cow position: | chr26:6476195-6476414 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 75 |
| Conread position: | 7-376 |
| Cow position: | chr26:21350983-21350604 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 184, 71 |
| Conread position: | 7-376 |
| Cow position: | chr26:25393269-25392897 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 18-368 |
| Cow position: | chr26:9558409-9558773 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 140, 63 |
| Conread position: | 26-332 |
| Cow position: | chr26:3157578-3157263 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 30-293 |
| Cow position: | chr26:3199830-3199558 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 134, 51 |
| Conread position: | 73-350 |
| Cow position: | chr26:3722865-3722575 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 99 |
| Conread position: | 76-277 |
| Cow position: | chr26:2740192-2740407 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 79-359 |
| Cow position: | chr26:10011536-10011239 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 93-376 |
| Cow position: | chr26:1088584-1088284 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 71, 292 |
Show alignments to all cow chromosomes.