Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-131
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 1-159
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 1-214
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 146, 27

Conread position: 1-236
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 208, 82

Conread position: 1-245
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 153, 78

Conread position: 1-275
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 163, 76

Conread position: 1-292
Cow position:
Alignm length: 305
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 146, 77

Conread position: 1-295
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 206, 82

Conread position: 1-295
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 163, 80

Conread position: 1-306
Cow position:
Alignm length: 317
Alignm identity: 222
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 162, 23

Conread position: 1-317
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 163, 82

Conread position: 1-333
Cow position:
Alignm length: 345
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 146, 78

Conread position: 1-333
Cow position:
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 57

Conread position: 1-350
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 153, 82

Conread position: 1-351
Cow position:
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-355
Cow position:
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 83

Conread position: 1-358
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 80

Conread position: 1-359
Cow position:
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-365
Cow position:
Alignm length: 379
Alignm identity: 251
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 149, 63

Conread position: 1-367
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 95, 63

Conread position: 1-368
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 63

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 14

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 382
Alignm identity: 254
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 164, 82

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-368
Cow position:
Alignm length: 393
Alignm identity: 271
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 55, 66

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 26

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 80

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 266
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 146, 80

Conread position: 1-369
Cow position:
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 158, 82

Conread position: 1-369
Cow position:
Alignm length: 387
Alignm identity: 260
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 163, 18

Conread position: 1-369
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 163, 74

Conread position: 1-370
Cow position:
Alignm length: 401
Alignm identity: 278
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 146, 76

Conread position: 1-370
Cow position:
Alignm length: 382
Alignm identity: 258
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 240, 77

Conread position: 1-371
Cow position:
Alignm length: 384
Alignm identity: 254
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 140, 68

Conread position: 1-373
Cow position:
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 1-375
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 260
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 163, 82

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 398
Alignm identity: 266
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 95, 49

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 253
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 133, 82

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 76

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 76

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 12

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 263
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 130, 76

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 53

Conread position: 2-334
Cow position:
Alignm length: 347
Alignm identity: 243
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 145, 75

Conread position: 2-368
Cow position:
Alignm length: 385
Alignm identity: 262
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 162, 71

Conread position: 3-149
Cow position:
Alignm length: 147
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 3-266
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 57, 65

Conread position: 3-327
Cow position:
Alignm length: 333
Alignm identity: 222
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 136, 78

Conread position: 3-369
Cow position:
Alignm length: 383
Alignm identity: 266
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 62

Conread position: 3-372
Cow position:
Alignm length: 390
Alignm identity: 258
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 144, 80

Conread position: 3-375
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 144, 80

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 24

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 78

Conread position: 3-376
Cow position:
Alignm length: 387
Alignm identity: 254
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 156, 80

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 252
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 165, 78

Conread position: 3-376
Cow position:
Alignm length: 386
Alignm identity: 259
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 62

Conread position: 3-376
Cow position:
Alignm length: 386
Alignm identity: 264
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 160, 27

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 78

Conread position: 3-376
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 78

Conread position: 3-376
Cow position:
Alignm length: 388
Alignm identity: 243
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 144, 68

Conread position: 4-298
Cow position:
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 61

Conread position: 7-277
Cow position:
Alignm length: 283
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 84

Conread position: 7-368
Cow position:
Alignm length: 381
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 7-373
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 76

Conread position: 7-374
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 89, 44

Conread position: 7-376
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 7-376
Cow position:
Alignm length: 381
Alignm identity: 253
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 152, 20

Conread position: 12-376
Cow position:
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 69

Conread position: 26-376
Cow position:
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 133, 56

Conread position: 71-369
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 34, 186

Conread position: 73-367
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 21, 136

Conread position: 76-368
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 18, 117

Conread position: 77-368
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 116

Conread position: 78-311
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 28

Conread position: 78-376
Cow position:
Alignm length: 317
Alignm identity: 214
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 64

Conread position: 97-376
Cow position:
Alignm length: 299
Alignm identity: 218
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 67, 57

Conread position: 106-376
Cow position:
Alignm length: 290
Alignm identity: 212
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 58, 86

Show alignments to all cow chromosomes.