Cow genome map
| Conread name: | rspl25_i21.y1 |
| Conread position: | 1-159 |
| Cow position: | chr5:7498706-7498860 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 1-159 |
| Cow position: | chr5:53185224-53185378 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-162 |
| Cow position: | chr5:43984363-43984206 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 1-238 |
| Cow position: | chr5:34527845-34527615 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 63 |
| Conread position: | 1-247 |
| Cow position: | chr5:39363151-39362901 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-264 |
| Cow position: | chr5:44275874-44275608 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 146, 77 |
| Conread position: | 1-274 |
| Cow position: | chr5:6694813-6694531 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 93, 62 |
| Conread position: | 1-279 |
| Cow position: | chr5:14551322-14551609 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 160, 82 |
| Conread position: | 1-280 |
| Cow position: | chr5:42744069-42743784 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 54 |
| Conread position: | 1-281 |
| Cow position: | chr5:4683222-4683509 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 146, 79 |
| Conread position: | 1-283 |
| Cow position: | chr5:41586553-41586262 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-284 |
| Cow position: | chr5:16100282-16100556 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 62 |
| Conread position: | 1-287 |
| Cow position: | chr5:55722808-55722513 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-292 |
| Cow position: | chr5:12337553-12337253 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-298 |
| Cow position: | chr5:26053010-26052704 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-299 |
| Cow position: | chr5:27195783-27196086 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 1-304 |
| Cow position: | chr5:57336085-57336397 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-304 |
| Cow position: | chr5:76098751-76099063 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-307 |
| Cow position: | chr5:12212812-12212497 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 163, 79 |
| Conread position: | 1-308 |
| Cow position: | chr5:4753854-4754170 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-309 |
| Cow position: | chr5:54337181-54336867 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 146, 77 |
| Conread position: | 1-313 |
| Cow position: | chr5:17387138-17387459 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 1-314 |
| Cow position: | chr5:45705290-45704978 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 151, 75 |
| Conread position: | 1-317 |
| Cow position: | chr5:31921337-31921016 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 29 |
| Conread position: | 1-323 |
| Cow position: | chr5:43991561-43991232 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 77 |
| Conread position: | 1-325 |
| Cow position: | chr5:47471675-47471339 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 148, 63 |
| Conread position: | 1-334 |
| Cow position: | chr5:23648151-23648488 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 129, 52 |
| Conread position: | 1-336 |
| Cow position: | chr5:8178413-8178074 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-337 |
| Cow position: | chr5:72046385-72046728 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 63 |
| Conread position: | 1-341 |
| Cow position: | chr5:445758-445409 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-350 |
| Cow position: | chr5:64061606-64061244 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-351 |
| Cow position: | chr5:24159214-24158850 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-363 |
| Cow position: | chr5:19969763-19970129 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 74 |
| Conread position: | 1-366 |
| Cow position: | chr5:27178914-27178548 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 159, 77 |
| Conread position: | 1-366 |
| Cow position: | chr5:55631343-55630964 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 80 |
| Conread position: | 1-367 |
| Cow position: | chr5:24632760-24633140 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-367 |
| Cow position: | chr5:26466903-26466540 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 82 |
| Conread position: | 1-368 |
| Cow position: | chr5:295540-295163 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 19 |
| Conread position: | 1-368 |
| Cow position: | chr5:2917740-2917362 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 71 |
| Conread position: | 1-368 |
| Cow position: | chr5:3500849-3501230 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:3789502-3789126 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 77 |
| Conread position: | 1-368 |
| Cow position: | chr5:6151553-6151934 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:6772844-6772466 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 163, 53 |
| Conread position: | 1-368 |
| Cow position: | chr5:10922124-10921743 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:14636300-14636680 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 81 |
| Conread position: | 1-368 |
| Cow position: | chr5:15723036-15723429 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 72 |
| Conread position: | 1-368 |
| Cow position: | chr5:19978635-19979016 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:23828918-23829277 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 162, 55 |
| Conread position: | 1-368 |
| Cow position: | chr5:24299292-24298911 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:26134989-26135375 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 162, 77 |
| Conread position: | 1-368 |
| Cow position: | chr5:29634708-29634327 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 79 |
| Conread position: | 1-368 |
| Cow position: | chr5:29742282-29742659 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:36906783-36907164 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:37735654-37735274 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 1-368 |
| Cow position: | chr5:42283442-42283068 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 1-368 |
| Cow position: | chr5:44709093-44709484 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 163, 77 |
| Conread position: | 1-368 |
| Cow position: | chr5:46676892-46676511 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 79 |
| Conread position: | 1-368 |
| Cow position: | chr5:47343152-47342772 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:54136359-54136740 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:54785829-54786210 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:54951843-54952224 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:56442536-56442157 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 159, 53 |
| Conread position: | 1-368 |
| Cow position: | chr5:58770593-58770972 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:59146656-59146275 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-368 |
| Cow position: | chr5:68337240-68337599 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 203, 25 |
| Conread position: | 1-369 |
| Cow position: | chr5:23354019-23353638 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 158, 78 |
| Conread position: | 1-369 |
| Cow position: | chr5:47855106-47854732 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 146, 82 |
| Conread position: | 1-369 |
| Cow position: | chr5:62159648-62160027 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 131, 50 |
| Conread position: | 1-370 |
| Cow position: | chr5:30302123-30301754 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 1-370 |
| Cow position: | chr5:34300160-34299788 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 1-370 |
| Cow position: | chr5:47871829-47872210 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 82 |
| Conread position: | 1-373 |
| Cow position: | chr5:9235132-9235512 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 15, 83 |
| Conread position: | 1-375 |
| Cow position: | chr5:18901598-18901226 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 268 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 240, 56 |
| Conread position: | 1-375 |
| Cow position: | chr5:41488948-41488562 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 14 |
| Conread position: | 1-375 |
| Cow position: | chr5:46667353-46666966 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:1059288-1059676 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:4434225-4434613 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:5924698-5925068 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:6124884-6125271 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 12 |
| Conread position: | 1-376 |
| Cow position: | chr5:6455384-6455772 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:6585175-6585562 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:9002831-9003219 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:11631706-11632094 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:12133872-12133488 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 163, 89 |
| Conread position: | 1-376 |
| Cow position: | chr5:14543022-14543409 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:18118696-18119084 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:18491687-18491297 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 382 |
| Conread position: | 1-376 |
| Cow position: | chr5:18667586-18667198 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 79 |
| Conread position: | 1-376 |
| Cow position: | chr5:20107751-20108136 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 19 |
| Conread position: | 1-376 |
| Cow position: | chr5:21828099-21827718 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 24 |
| Conread position: | 1-376 |
| Cow position: | chr5:29255935-29256320 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:36369713-36370101 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:37380365-37379978 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:42676522-42676152 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 140, 82 |
| Conread position: | 1-376 |
| Cow position: | chr5:44617424-44617036 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 79 |
| Conread position: | 1-376 |
| Cow position: | chr5:46779793-46779407 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 133, 12 |
| Conread position: | 1-376 |
| Cow position: | chr5:46816824-46817211 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 76 |
| Conread position: | 1-376 |
| Cow position: | chr5:48026547-48026161 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 80 |
| Conread position: | 1-376 |
| Cow position: | chr5:52822929-52823315 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 76 |
| Conread position: | 1-376 |
| Cow position: | chr5:72857154-72856765 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 270 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 2-327 |
| Cow position: | chr5:32810752-32811083 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 2-375 |
| Cow position: | chr5:25912996-25912625 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 76 |
| Conread position: | 2-376 |
| Cow position: | chr5:62377643-62377265 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 51 |
| Conread position: | 3-187 |
| Cow position: | chr5:39448270-39448454 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 129, 61 |
| Conread position: | 3-283 |
| Cow position: | chr5:33536888-33536605 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 146, 51 |
| Conread position: | 3-287 |
| Cow position: | chr5:57935832-57936138 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 3-313 |
| Cow position: | chr5:54088990-54088688 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 128, 52 |
| Conread position: | 3-317 |
| Cow position: | chr5:34709046-34708723 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 160, 78 |
| Conread position: | 3-323 |
| Cow position: | chr5:46707914-46707594 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 146, 76 |
| Conread position: | 3-324 |
| Cow position: | chr5:23845275-23845595 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 201, 76 |
| Conread position: | 3-352 |
| Cow position: | chr5:21188211-21187848 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 149, 78 |
| Conread position: | 3-367 |
| Cow position: | chr5:17645805-17646184 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 140, 57 |
| Conread position: | 3-368 |
| Cow position: | chr5:7396520-7396147 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 78 |
| Conread position: | 3-368 |
| Cow position: | chr5:24577713-24577334 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 3-368 |
| Cow position: | chr5:46735000-46735378 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 77 |
| Conread position: | 3-369 |
| Cow position: | chr5:22857356-22857737 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 3-375 |
| Cow position: | chr5:48574550-48574922 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 259 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 140, 58 |
| Conread position: | 3-376 |
| Cow position: | chr5:3970799-3970416 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 3-376 |
| Cow position: | chr5:10066273-10066659 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 3-376 |
| Cow position: | chr5:18404781-18405160 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 161, 76 |
| Conread position: | 3-376 |
| Cow position: | chr5:24643597-24643971 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 73 |
| Conread position: | 3-376 |
| Cow position: | chr5:46626000-46626382 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 262 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 144, 80 |
| Conread position: | 3-376 |
| Cow position: | chr5:51746495-51746114 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 78 |
| Conread position: | 3-376 |
| Cow position: | chr5:53075593-53075978 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 78 |
| Conread position: | 3-376 |
| Cow position: | chr5:58004506-58004128 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 138, 75 |
| Conread position: | 3-376 |
| Cow position: | chr5:62436397-62436017 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 4-299 |
| Cow position: | chr5:28947135-28947432 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 79 |
| Conread position: | 7-239 |
| Cow position: | chr5:16894878-16895109 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 7-298 |
| Cow position: | chr5:50899906-50899607 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 7-322 |
| Cow position: | chr5:10262003-10262326 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 142, 76 |
| Conread position: | 7-368 |
| Cow position: | chr5:18250320-18249957 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 141, 42 |
| Conread position: | 7-368 |
| Cow position: | chr5:29222992-29223361 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 157, 74 |
| Conread position: | 7-375 |
| Cow position: | chr5:30294576-30294211 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 44 |
| Conread position: | 7-376 |
| Cow position: | chr5:26096549-26096181 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 64 |
| Conread position: | 8-374 |
| Cow position: | chr5:33775514-33775875 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 62 |
| Conread position: | 9-224 |
| Cow position: | chr5:55088125-55087905 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 81 |
| Conread position: | 9-369 |
| Cow position: | chr5:67654595-67654225 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 10-376 |
| Cow position: | chr5:71738381-71738005 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 71 |
| Conread position: | 12-376 |
| Cow position: | chr5:9091158-9091531 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 26-376 |
| Cow position: | chr5:54927665-54928028 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 26-376 |
| Cow position: | chr5:54929993-54930356 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 55 |
| Conread position: | 35-225 |
| Cow position: | chr5:15362289-15362095 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 35-375 |
| Cow position: | chr5:41356598-41356941 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 106, 48 |
| Conread position: | 36-367 |
| Cow position: | chr5:14781987-14782327 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 41-368 |
| Cow position: | chr5:38848346-38848687 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 73-369 |
| Cow position: | chr5:47696992-47697299 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 12, 242 |
| Conread position: | 76-333 |
| Cow position: | chr5:46587797-46588066 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 18, 115 |
| Conread position: | 76-368 |
| Cow position: | chr5:2203182-2203493 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 225 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 76-375 |
| Cow position: | chr5:37626068-37625753 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 78-345 |
| Cow position: | chr5:7552972-7552706 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 41 |
| Conread position: | 78-376 |
| Cow position: | chr5:40792042-40791731 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 211 |
| Conread position: | 80-376 |
| Cow position: | chr5:25901270-25901583 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 67, 305 |
| Conread position: | 93-368 |
| Cow position: | chr5:10299659-10299366 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 93-368 |
| Cow position: | chr5:13630303-13630596 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 216 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 94-376 |
| Cow position: | chr5:35446426-35446724 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 211 |
| Conread position: | 105-368 |
| Cow position: | chr5:2695623-2695904 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 87 |
| Conread position: | 105-368 |
| Cow position: | chr5:30157539-30157258 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 59, 87 |
Show alignments to all cow chromosomes.