Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-162
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-193
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 146, 56

Conread position: 1-238
Cow position:
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 163, 80

Conread position: 1-246
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 208, 74

Conread position: 1-255
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 151, 80

Conread position: 1-256
Cow position:
Alignm length: 264
Alignm identity: 176
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 163, 80

Conread position: 1-262
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 146, 65

Conread position: 1-272
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 146, 20

Conread position: 1-283
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 188, 79

Conread position: 1-287
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 52

Conread position: 1-287
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 142, 82

Conread position: 1-294
Cow position:
Alignm length: 305
Alignm identity: 201
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 159, 22

Conread position: 1-298
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 163, 80

Conread position: 1-306
Cow position:
Alignm length: 311
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 246, 78

Conread position: 1-314
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 163, 80

Conread position: 1-315
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 146, 9

Conread position: 1-323
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 163, 80

Conread position: 1-325
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 110, 76

Conread position: 1-328
Cow position:
Alignm length: 340
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 82

Conread position: 1-333
Cow position:
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 245
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-333
Cow position:
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-334
Cow position:
Alignm length: 347
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 65

Conread position: 1-335
Cow position:
Alignm length: 348
Alignm identity: 230
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 158, 76

Conread position: 1-349
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 146, 80

Conread position: 1-351
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-362
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-362
Cow position:
Alignm length: 383
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 62

Conread position: 1-362
Cow position:
Alignm length: 384
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 56

Conread position: 1-364
Cow position:
Alignm length: 383
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-366
Cow position:
Alignm length: 380
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 66, 60

Conread position: 1-366
Cow position:
Alignm length: 384
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-367
Cow position:
Alignm length: 380
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 203, 29

Conread position: 1-367
Cow position:
Alignm length: 385
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-367
Cow position:
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 383
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 65

Conread position: 1-368
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 79

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 54

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 65

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 80

Conread position: 1-368
Cow position:
Alignm length: 394
Alignm identity: 264
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 82

Conread position: 1-368
Cow position:
Alignm length: 380
Alignm identity: 253
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 165

Conread position: 1-368
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 163, 78

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 160, 79

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-368
Cow position:
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 80

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 251
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 129, 12

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 258
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 59

Conread position: 1-370
Cow position:
Alignm length: 383
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 203, 77

Conread position: 1-370
Cow position:
Alignm length: 384
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 127, 89

Conread position: 1-373
Cow position:
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-374
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 158, 62

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 41

Conread position: 1-375
Cow position:
Alignm length: 394
Alignm identity: 265
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 62

Conread position: 1-375
Cow position:
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 131, 52

Conread position: 1-375
Cow position:
Alignm length: 387
Alignm identity: 264
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 208, 77

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 268
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 273
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 78

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 268
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 146, 61

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 255
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 78

Conread position: 1-376
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 262
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 79

Conread position: 1-376
Cow position:
Alignm length: 392
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 79

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 387
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 82

Conread position: 1-376
Cow position:
Alignm length: 388
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 75

Conread position: 1-376
Cow position:
Alignm length: 389
Alignm identity: 274
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 146, 64

Conread position: 1-376
Cow position:
Alignm length: 386
Alignm identity: 262
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 149, 52

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position:
Alignm length: 395
Alignm identity: 272
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 81

Conread position: 1-376
Cow position:
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 82

Conread position: 1-376
Cow position:
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 2-239
Cow position:
Alignm length: 247
Alignm identity: 166
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 162, 79

Conread position: 2-328
Cow position:
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 76

Conread position: 2-376
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 162, 79

Conread position: 2-376
Cow position:
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 76

Conread position: 2-376
Cow position:
Alignm length: 394
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 79

Conread position: 2-376
Cow position:
Alignm length: 390
Alignm identity: 259
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 79

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 3-207
Cow position:
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 80

Conread position: 3-268
Cow position:
Alignm length: 279
Alignm identity: 186
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 78

Conread position: 3-298
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 161, 78

Conread position: 3-299
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 129, 76

Conread position: 3-351
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 161, 78

Conread position: 3-362
Cow position:
Alignm length: 380
Alignm identity: 248
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 127, 80

Conread position: 3-371
Cow position:
Alignm length: 385
Alignm identity: 265
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 138, 76

Conread position: 3-375
Cow position:
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 10

Conread position: 3-376
Cow position:
Alignm length: 395
Alignm identity: 267
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 93, 62

Conread position: 3-376
Cow position:
Alignm length: 392
Alignm identity: 265
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 72

Conread position: 3-376
Cow position:
Alignm length: 391
Alignm identity: 259
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 165, 184

Conread position: 3-376
Cow position:
Alignm length: 390
Alignm identity: 269
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 161, 75

Conread position: 4-207
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 133, 71

Conread position: 4-368
Cow position:
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 76

Conread position: 4-371
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 49

Conread position: 7-309
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 44

Conread position: 7-369
Cow position:
Alignm length: 382
Alignm identity: 255
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 123, 56

Conread position: 7-371
Cow position:
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 58

Conread position: 7-376
Cow position:
Alignm length: 388
Alignm identity: 263
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 140, 57

Conread position: 7-376
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 72

Conread position: 8-162
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 9-376
Cow position:
Alignm length: 384
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 138, 70

Conread position: 10-376
Cow position:
Alignm length: 383
Alignm identity: 262
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 137, 73

Conread position: 15-376
Cow position:
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 68

Conread position: 16-216
Cow position:
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 188, 67

Conread position: 21-370
Cow position:
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 143, 58

Conread position: 29-334
Cow position:
Alignm length: 324
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 164

Conread position: 29-368
Cow position:
Alignm length: 356
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 50

Conread position: 73-373
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 22, 72

Conread position: 73-375
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 89

Conread position: 73-376
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 73-376
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 210

Conread position: 74-327
Cow position:
Alignm length: 267
Alignm identity: 182
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 73, 20

Conread position: 75-376
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 148

Conread position: 76-368
Cow position:
Alignm length: 313
Alignm identity: 226
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 117

Conread position: 76-375
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 66

Conread position: 76-376
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 18, 310

Conread position: 78-375
Cow position:
Alignm length: 317
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 85-370
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 119, 147

Conread position: 93-308
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.