Cow genome map

Conread name: rspl25_i21.y1

Conread position: 1-150
Cow position: chrX:23317157-23317301 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 1-162
Cow position: chrX:865651-865494 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 1-162
Cow position: chrX:11566169-11566012 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-162
Cow position: chrX:11950231-11950388 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 1-162
Cow position: chrX:18898394-18898551 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 1-162
Cow position: chrX:37134378-37134535 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 1-172
Cow position: chrX:2524478-2524650 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 142, 81

Conread position: 1-172
Cow position: chrX:40268740-40268563 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 50

Conread position: 1-224
Cow position: chrX:4751114-4751334 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 150, 73

Conread position: 1-235
Cow position: chrX:6766480-6766717 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 146, 77

Conread position: 1-246
Cow position: chrX:37832212-37832443 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 140, 23

Conread position: 1-247
Cow position: chrX:2293345-2293595 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 163, 78

Conread position: 1-247
Cow position: chrX:21255034-21254784 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 163, 80

Conread position: 1-248
Cow position: chrX:4995865-4995620 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 133, 74

Conread position: 1-253
Cow position: chrX:37118165-37117908 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 131, 78

Conread position: 1-266
Cow position: chrX:28866757-28867034 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 146, 77

Conread position: 1-268
Cow position: chrX:39730884-39731158 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 193
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 163, 80

Conread position: 1-281
Cow position: chrX:13206207-13205921 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 163, 72

Conread position: 1-285
Cow position: chrX:13031397-13031688 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 163, 73

Conread position: 1-286
Cow position: chrX:27095384-27095098 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 208
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 142, 80

Conread position: 1-298
Cow position: chrX:3417882-3418187 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 163, 12

Conread position: 1-298
Cow position: chrX:22838527-22838221 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position: chrX:28058577-28058271 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 217
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 163, 80

Conread position: 1-298
Cow position: chrX:33763400-33763094 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 163, 80

Conread position: 1-299
Cow position: chrX:38150943-38150637 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 158, 79

Conread position: 1-309
Cow position: chrX:39185428-39185111 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 163, 80

Conread position: 1-321
Cow position: chrX:12346151-12345822 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 131, 79

Conread position: 1-323
Cow position: chrX:40560286-40560614 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 82

Conread position: 1-327
Cow position: chrX:41791460-41791799 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 133, 82

Conread position: 1-332
Cow position: chrX:26760313-26760653 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 146, 80

Conread position: 1-333
Cow position: chrX:28503591-28503250 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 241
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 80

Conread position: 1-333
Cow position: chrX:40224989-40225320 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 205, 18

Conread position: 1-350
Cow position: chrX:17290435-17290074 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-351
Cow position: chrX:10059720-10059357 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-351
Cow position: chrX:33685386-33685022 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-359
Cow position: chrX:8590837-8590463 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-362
Cow position: chrX:5334560-5334933 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-366
Cow position: chrX:22579132-22579511 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 163, 80

Conread position: 1-367
Cow position: chrX:620009-620385 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 77

Conread position: 1-367
Cow position: chrX:6235601-6235972 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 256
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 142, 63

Conread position: 1-368
Cow position: chrX:323169-322790 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 265
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 151, 80

Conread position: 1-368
Cow position: chrX:1550220-1549839 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:4343006-4342626 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:5646849-5647230 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:6453952-6453572 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 80

Conread position: 1-368
Cow position: chrX:11409079-11409460 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:12145357-12144973 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 93

Conread position: 1-368
Cow position: chrX:15151420-15151790 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 259
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 185, 82

Conread position: 1-368
Cow position: chrX:15977698-15978077 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:16085403-16085784 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:16702926-16702545 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 78

Conread position: 1-368
Cow position: chrX:17891801-17891418 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 267
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 82

Conread position: 1-368
Cow position: chrX:18193945-18193564 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:22809508-22809139 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 78, 100

Conread position: 1-368
Cow position: chrX:22811145-22810769 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-368
Cow position: chrX:23022568-23022192 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 80

Conread position: 1-368
Cow position: chrX:23452190-23452573 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:24588481-24588860 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 76

Conread position: 1-368
Cow position: chrX:27318486-27318105 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-368
Cow position: chrX:29099672-29099293 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:29880025-29880405 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 261
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 179, 80

Conread position: 1-368
Cow position: chrX:30455366-30455742 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-368
Cow position: chrX:30964731-30965112 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:32063916-32064293 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 56, 18

Conread position: 1-368
Cow position: chrX:32643741-32643360 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:34094961-34094580 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:36195347-36194970 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 163, 80

Conread position: 1-368
Cow position: chrX:36729639-36729258 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-369
Cow position: chrX:13178352-13178733 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 1-369
Cow position: chrX:15140281-15140657 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 257
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 216, 78

Conread position: 1-370
Cow position: chrX:23572561-23572946 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-374
Cow position: chrX:14598101-14597726 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 146, 80

Conread position: 1-374
Cow position: chrX:14801565-14801949 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 146, 12

Conread position: 1-374
Cow position: chrX:18656550-18656936 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-375
Cow position: chrX:5289431-5289816 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-375
Cow position: chrX:16465556-16465175 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 80

Conread position: 1-375
Cow position: chrX:23341736-23342123 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 76

Conread position: 1-375
Cow position: chrX:29907947-29908334 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 158, 80

Conread position: 1-375
Cow position: chrX:38231012-38231399 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:2103660-2103272 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:2559705-2560090 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:2579674-2579288 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 80

Conread position: 1-376
Cow position: chrX:2813227-2813608 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:3361076-3360689 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 270
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 151, 80

Conread position: 1-376
Cow position: chrX:3372598-3372985 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 76

Conread position: 1-376
Cow position: chrX:3406087-3406459 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 132, 76

Conread position: 1-376
Cow position: chrX:3649568-3649959 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 275
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 131, 63

Conread position: 1-376
Cow position: chrX:4622698-4623086 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:4905735-4906120 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 63

Conread position: 1-376
Cow position: chrX:5332178-5332564 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:5361265-5360877 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:5866401-5866013 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:6372435-6372047 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:6581189-6580802 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 30

Conread position: 1-376
Cow position: chrX:7485062-7484674 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:7572641-7572258 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 261
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 163, 48

Conread position: 1-376
Cow position: chrX:7755160-7754773 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 71

Conread position: 1-376
Cow position: chrX:8400306-8400677 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 262
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 129, 60

Conread position: 1-376
Cow position: chrX:9011582-9011198 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 272
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 146, 20

Conread position: 1-376
Cow position: chrX:9642177-9642561 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position: chrX:10412720-10413107 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 74

Conread position: 1-376
Cow position: chrX:10866614-10866989 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 77

Conread position: 1-376
Cow position: chrX:11976191-11976578 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 80

Conread position: 1-376
Cow position: chrX:12307507-12307895 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:12360143-12359752 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:13928487-13928875 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:14049939-14050326 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 79

Conread position: 1-376
Cow position: chrX:14782090-14782478 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 265
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 162, 80

Conread position: 1-376
Cow position: chrX:15621277-15621664 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 146, 63

Conread position: 1-376
Cow position: chrX:16040424-16040811 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:16359752-16360140 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:16526045-16525658 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 266
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:16808559-16808946 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:17782755-17782367 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:18023737-18024125 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:19399033-19398645 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 82

Conread position: 1-376
Cow position: chrX:20356740-20357132 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 77

Conread position: 1-376
Cow position: chrX:20503895-20503510 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 93, 56

Conread position: 1-376
Cow position: chrX:20953788-20953404 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 163, 90

Conread position: 1-376
Cow position: chrX:21389833-21389445 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 78

Conread position: 1-376
Cow position: chrX:21415122-21414734 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 164, 78

Conread position: 1-376
Cow position: chrX:21793846-21793457 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 78

Conread position: 1-376
Cow position: chrX:22077087-22077473 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 79

Conread position: 1-376
Cow position: chrX:22612658-22612270 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:22819333-22818941 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 271
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 158, 81

Conread position: 1-376
Cow position: chrX:23986505-23986117 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 146, 77

Conread position: 1-376
Cow position: chrX:24346304-24345916 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:24769602-24769989 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 71

Conread position: 1-376
Cow position: chrX:25289424-25289812 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 80

Conread position: 1-376
Cow position: chrX:26230503-26230891 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:26618379-26617991 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 1-376
Cow position: chrX:27305184-27304798 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 1-376
Cow position: chrX:27616063-27615680 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 273
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 163, 29

Conread position: 1-376
Cow position: chrX:27758963-27758576 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 57

Conread position: 1-376
Cow position: chrX:28133351-28132968 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 152, 29

Conread position: 1-376
Cow position: chrX:28588226-28587850 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 80

Conread position: 1-376
Cow position: chrX:28647015-28647402 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 272
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 151, 76

Conread position: 1-376
Cow position: chrX:29225733-29225345 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:30053213-30053601 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:30172452-30172839 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 163, 14

Conread position: 1-376
Cow position: chrX:30199737-30200125 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:30836642-30836254 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:31978586-31978972 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:34761321-34760933 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 146, 78

Conread position: 1-376
Cow position: chrX:35287680-35287292 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 65

Conread position: 1-376
Cow position: chrX:35937821-35938198 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 141, 82

Conread position: 1-376
Cow position: chrX:36535480-36535862 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 146, 20

Conread position: 1-376
Cow position: chrX:37080264-37080647 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 17

Conread position: 1-376
Cow position: chrX:38961595-38961983 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 81

Conread position: 1-376
Cow position: chrX:39713806-39713418 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 163, 80

Conread position: 1-376
Cow position: chrX:41847275-41847662 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 95, 63

Conread position: 1-376
Cow position: chrX:45373853-45374232 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 158, 76

Conread position: 2-295
Cow position: chrX:24280174-24279869 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 152, 77

Conread position: 3-280
Cow position: chrX:41733937-41734216 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 80

Conread position: 3-282
Cow position: chrX:39559110-39559383 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 138, 48

Conread position: 3-309
Cow position: chrX:33803742-33804048 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 242, 75

Conread position: 3-322
Cow position: chrX:36839959-36839639 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 173, 80

Conread position: 3-325
Cow position: chrX:46296913-46296584 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 228
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 139, 10

Conread position: 3-350
Cow position: chrX:20792389-20792034 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 159, 60

Conread position: 3-364
Cow position: chrX:18244238-18243871 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 78

Conread position: 3-367
Cow position: chrX:40070358-40070728 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 252
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 211, 69

Conread position: 3-368
Cow position: chrX:21226730-21226356 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 75

Conread position: 3-369
Cow position: chrX:3155332-3155705 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 58

Conread position: 3-371
Cow position: chrX:29892340-29891971 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 161, 74

Conread position: 3-375
Cow position: chrX:26508480-26508103 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 257
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 148, 87

Conread position: 3-375
Cow position: chrX:30089793-30090174 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 60

Conread position: 3-375
Cow position: chrX:40693476-40693863 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 265
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 147, 87

Conread position: 3-376
Cow position: chrX:2008450-2008829 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 50

Conread position: 3-376
Cow position: chrX:16782533-16782153 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 74

Conread position: 3-376
Cow position: chrX:20675121-20674735 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 74

Conread position: 3-376
Cow position: chrX:21592544-21592160 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 259
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 145, 80

Conread position: 3-376
Cow position: chrX:25282240-25282627 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 266
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 81

Conread position: 3-376
Cow position: chrX:27450796-27451165 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 250
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 165, 76

Conread position: 3-376
Cow position: chrX:28605843-28606222 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 252
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 136, 63

Conread position: 3-376
Cow position: chrX:29916093-29916479 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 12

Conread position: 4-369
Cow position: chrX:26447331-26446973 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 173, 73

Conread position: 4-375
Cow position: chrX:17889608-17889983 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 264
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 200, 79

Conread position: 7-207
Cow position: chrX:31372712-31372509 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 77

Conread position: 7-271
Cow position: chrX:1056137-1056411 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 104, 76

Conread position: 7-309
Cow position: chrX:40184322-40184011 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 157, 75

Conread position: 7-350
Cow position: chrX:34553993-34553648 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 241, 71

Conread position: 7-356
Cow position: chrX:39556546-39556902 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 55

Conread position: 7-368
Cow position: chrX:23280273-23279901 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 7-368
Cow position: chrX:27977585-27977958 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 72

Conread position: 7-368
Cow position: chrX:31728712-31728341 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 266
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 140, 57

Conread position: 7-376
Cow position: chrX:1616985-1617362 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 76

Conread position: 7-376
Cow position: chrX:30681255-30681631 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 255
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 53

Conread position: 7-376
Cow position: chrX:34442193-34442561 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 258
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 197, 71

Conread position: 7-376
Cow position: chrX:39548648-39548266 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 74

Conread position: 8-375
Cow position: chrX:2300129-2299762 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 19

Conread position: 8-376
Cow position: chrX:11499528-11499907 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 73

Conread position: 8-376
Cow position: chrX:16325279-16325657 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 139, 75

Conread position: 8-376
Cow position: chrX:17663669-17664048 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 256
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 135, 20

Conread position: 8-376
Cow position: chrX:25848050-25847690 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 252
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 88, 70

Conread position: 26-341
Cow position: chrX:5427490-5427177 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 55

Conread position: 26-367
Cow position: chrX:6279373-6279730 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 121, 57

Conread position: 26-368
Cow position: chrX:7120837-7120481 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 55

Conread position: 26-376
Cow position: chrX:25451566-25451203 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 52

Conread position: 26-376
Cow position: chrX:27498059-27497699 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 55

Conread position: 31-356
Cow position: chrX:39352396-39352725 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 121, 47

Conread position: 35-368
Cow position: chrX:24292442-24292792 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 9, 20

Conread position: 36-311
Cow position: chrX:9763851-9764135 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 128, 36

Conread position: 36-376
Cow position: chrX:16803647-16803999 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 45

Conread position: 73-368
Cow position: chrX:21833072-21832760 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 0

Conread position: 76-376
Cow position: chrX:24321442-24321761 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 311

Conread position: 77-375
Cow position: chrX:23134774-23134465 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 67

Conread position: 78-368
Cow position: chrX:21818282-21818580 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 126, 197

Conread position: 78-368
Cow position: chrX:29930209-29930518 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 16, 115

Conread position: 80-368
Cow position: chrX:32145075-32145382 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 84, 0

Conread position: 93-368
Cow position: chrX:30435450-30435744 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 71, 100

Conread position: 93-369
Cow position: chrX:20742020-20741726 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 93-376
Cow position: chrX:19473981-19474281 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 292

Show alignments to all cow chromosomes.