Cow genome map

Conread name: rspl37_l12.y1

Conread position: 1-242
Cow position:
Alignm length: 243
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 169, 162

Conread position: 1-278
Cow position:
Alignm length: 280
Alignm identity: 177
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 149, 169

Conread position: 1-311
Cow position:
Alignm length: 315
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 150, 160

Conread position: 1-359
Cow position:
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 324

Conread position: 1-378
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-395
Cow position:
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-398
Cow position:
Alignm length: 402
Alignm identity: 246
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 76

Conread position: 1-398
Cow position:
Alignm length: 399
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 335

Conread position: 1-413
Cow position:
Alignm length: 417
Alignm identity: 271
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 78, 84

Conread position: 1-429
Cow position:
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 159

Conread position: 1-434
Cow position:
Alignm length: 434
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-452
Cow position:
Alignm length: 457
Alignm identity: 281
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 231, 217

Conread position: 1-467
Cow position:
Alignm length: 472
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 159

Conread position: 1-470
Cow position:
Alignm length: 474
Alignm identity: 298
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 85, 78

Conread position: 1-474
Cow position:
Alignm length: 477
Alignm identity: 298
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 63, 82

Conread position: 1-479
Cow position:
Alignm length: 482
Alignm identity: 303
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 149, 179

Conread position: 1-479
Cow position:
Alignm length: 479
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 301

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 301

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 160

Conread position: 1-480
Cow position:
Alignm length: 483
Alignm identity: 296
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 85

Conread position: 1-480
Cow position:
Alignm length: 481
Alignm identity: 295
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 157, 170

Conread position: 1-480
Cow position:
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-481
Cow position:
Alignm length: 486
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 244, 256

Conread position: 1-481
Cow position:
Alignm length: 487
Alignm identity: 304
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 149, 114

Conread position: 1-481
Cow position:
Alignm length: 485
Alignm identity: 301
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 160

Conread position: 1-481
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 465, 7

Conread position: 1-482
Cow position:
Alignm length: 486
Alignm identity: 303
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 75

Conread position: 1-484
Cow position:
Alignm length: 488
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 53

Conread position: 1-484
Cow position:
Alignm length: 486
Alignm identity: 302
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 85, 78

Conread position: 1-484
Cow position:
Alignm length: 485
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-485
Cow position:
Alignm length: 486
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 77

Conread position: 1-486
Cow position:
Alignm length: 492
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 159

Conread position: 1-488
Cow position:
Alignm length: 495
Alignm identity: 315
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 58, 53

Conread position: 1-491
Cow position:
Alignm length: 496
Alignm identity: 306
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 149, 179

Conread position: 1-491
Cow position:
Alignm length: 495
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 155

Conread position: 1-491
Cow position:
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 70

Conread position: 1-492
Cow position:
Alignm length: 497
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 155

Conread position: 1-497
Cow position:
Alignm length: 503
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 169

Conread position: 1-497
Cow position:
Alignm length: 500
Alignm identity: 308
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 87, 78

Conread position: 1-498
Cow position:
Alignm length: 504
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 1-499
Cow position:
Alignm length: 504
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 159

Conread position: 1-500
Cow position:
Alignm length: 506
Alignm identity: 317
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 58, 53

Conread position: 1-500
Cow position:
Alignm length: 503
Alignm identity: 316
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 165, 135

Conread position: 1-500
Cow position:
Alignm length: 502
Alignm identity: 308
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 253, 246

Conread position: 1-500
Cow position:
Alignm length: 503
Alignm identity: 311
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 152, 147

Conread position: 1-501
Cow position:
Alignm length: 503
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 78

Conread position: 1-506
Cow position:
Alignm length: 506
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-506
Cow position:
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-507
Cow position:
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-508
Cow position:
Alignm length: 509
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 330

Conread position: 1-509
Cow position:
Alignm length: 514
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 85

Conread position: 1-509
Cow position:
Alignm length: 509
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-509
Cow position:
Alignm length: 511
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 79

Conread position: 1-509
Cow position:
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 159

Conread position: 1-509
Cow position:
Alignm length: 509
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-509
Cow position:
Alignm length: 510
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 339

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 148

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 512
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 78

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 159

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 32

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 159

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 512
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 159

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 511
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 324

Conread position: 1-510
Cow position:
Alignm length: 512
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 324

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 161

Conread position: 3-491
Cow position:
Alignm length: 492
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 51

Conread position: 5-470
Cow position:
Alignm length: 472
Alignm identity: 304
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 81, 74

Conread position: 5-482
Cow position:
Alignm length: 482
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 74

Conread position: 7-481
Cow position:
Alignm length: 475
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-481
Cow position:
Alignm length: 475
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-510
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 194

Conread position: 7-510
Cow position:
Alignm length: 504
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 7-510
Cow position:
Alignm length: 505
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 342

Conread position: 8-510
Cow position:
Alignm length: 504
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 153

Conread position: 9-481
Cow position:
Alignm length: 473
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-507
Cow position:
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-508
Cow position:
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 50

Conread position: 10-510
Cow position:
Alignm length: 501
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-510
Cow position:
Alignm length: 502
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 151

Conread position: 11-501
Cow position:
Alignm length: 492
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 312

Conread position: 11-510
Cow position:
Alignm length: 505
Alignm identity: 302
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 57

Conread position: 11-510
Cow position:
Alignm length: 501
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 312

Conread position: 13-481
Cow position:
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 300

Conread position: 13-484
Cow position:
Alignm length: 473
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 149

Conread position: 13-488
Cow position:
Alignm length: 484
Alignm identity: 300
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 67, 74

Conread position: 13-492
Cow position:
Alignm length: 483
Alignm identity: 301
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 156, 133

Conread position: 13-507
Cow position:
Alignm length: 496
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 318

Conread position: 13-510
Cow position:
Alignm length: 502
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 191

Conread position: 13-510
Cow position:
Alignm length: 500
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 147

Conread position: 16-506
Cow position:
Alignm length: 491
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-507
Cow position:
Alignm length: 492
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 18-510
Cow position:
Alignm length: 498
Alignm identity: 301
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 103

Conread position: 19-408
Cow position:
Alignm length: 395
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 50

Conread position: 19-481
Cow position:
Alignm length: 468
Alignm identity: 289
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 67

Conread position: 19-491
Cow position:
Alignm length: 480
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 154

Conread position: 28-493
Cow position:
Alignm length: 471
Alignm identity: 291
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 58, 51

Conread position: 37-510
Cow position:
Alignm length: 475
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 118

Conread position: 39-455
Cow position:
Alignm length: 420
Alignm identity: 255
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 232, 165

Conread position: 40-510
Cow position:
Alignm length: 472
Alignm identity: 294
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 143, 126

Conread position: 46-500
Cow position:
Alignm length: 460
Alignm identity: 293
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 105, 127

Conread position: 46-509
Cow position:
Alignm length: 469
Alignm identity: 303
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 99, 123

Conread position: 68-486
Cow position:
Alignm length: 421
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 90

Conread position: 76-491
Cow position:
Alignm length: 420
Alignm identity: 265
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 22, 15

Conread position: 83-307
Cow position:
Alignm length: 229
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 91

Conread position: 87-510
Cow position:
Alignm length: 430
Alignm identity: 267
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 52

Conread position: 94-510
Cow position:
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 97-510
Cow position:
Alignm length: 415
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 44

Conread position: 103-492
Cow position:
Alignm length: 393
Alignm identity: 258
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 45, 58

Conread position: 105-498
Cow position:
Alignm length: 399
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 34

Conread position: 159-484
Cow position:
Alignm length: 327
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 175, 169

Conread position: 163-498
Cow position:
Alignm length: 337
Alignm identity: 228
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 162, 15

Conread position: 177-507
Cow position:
Alignm length: 332
Alignm identity: 213
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 89, 84

Conread position: 185-486
Cow position:
Alignm length: 306
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 63

Conread position: 185-492
Cow position:
Alignm length: 308
Alignm identity: 190
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 234-500
Cow position:
Alignm length: 267
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 261, 0

Conread position: 259-510
Cow position:
Alignm length: 254
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 79

Conread position: 263-510
Cow position:
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 50

Conread position: 263-510
Cow position:
Alignm length: 248
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.