Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-293 |
| Cow position: | chr17:22498826-22498534 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 1-304 |
| Cow position: | chr17:22451980-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-434 |
| Cow position: | chr17:22589617-22589184 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-459 |
| Cow position: | chr17:22589953-22589495 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 70 |
| Conread position: | 1-460 |
| Cow position: | chr17:22551947-22551487 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 288 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 448, 0 |
| Conread position: | 1-463 |
| Cow position: | chr17:22499078-22498616 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 142, 135 |
| Conread position: | 1-469 |
| Cow position: | chr17:22473483-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 1-475 |
| Cow position: | chr17:22499414-22498940 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-479 |
| Cow position: | chr17:22590121-22589643 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 296 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-479 |
| Cow position: | chr17:22590289-22589811 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 337, 329 |
| Conread position: | 1-480 |
| Cow position: | chr17:22499330-22498851 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 1-481 |
| Cow position: | chr17:22452316-22451836 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 1-481 |
| Cow position: | chr17:22552703-22552223 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 295 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 306, 322 |
| Conread position: | 1-481 |
| Cow position: | chr17:22590037-22589557 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 421, 414 |
| Conread position: | 1-482 |
| Cow position: | chr17:22499246-22498765 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-491 |
| Cow position: | chr17:22452400-22451910 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 1-492 |
| Cow position: | chr17:22553039-22552548 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 301 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-493 |
| Cow position: | chr17:22552031-22551539 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 154, 140 |
| Conread position: | 1-498 |
| Cow position: | chr17:22452232-22451735 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 144, 138 |
| Conread position: | 1-508 |
| Cow position: | chr17:22589701-22589194 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 1-510 |
| Cow position: | chr17:22552115-22551606 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 325 |
| Conread position: | 1-510 |
| Cow position: | chr17:22552283-22551774 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 336, 329 |
| Conread position: | 1-510 |
| Cow position: | chr17:22552451-22551942 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 1-510 |
| Cow position: | chr17:22552619-22552110 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 337 |
| Conread position: | 1-510 |
| Cow position: | chr17:22552955-22552446 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 79 |
| Conread position: | 1-510 |
| Cow position: | chr17:22589869-22589360 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 339 |
| Conread position: | 1-510 |
| Cow position: | chr17:22590205-22589696 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 416, 440 |
| Conread position: | 2-509 |
| Cow position: | chr17:22553122-22552615 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 153, 137 |
| Conread position: | 13-323 |
| Cow position: | chr17:22589521-22589211 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 238, 234 |
| Conread position: | 13-461 |
| Cow position: | chr17:22498982-22498534 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 46, 37 |
| Conread position: | 13-492 |
| Cow position: | chr17:22589773-22589294 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 13-510 |
| Cow position: | chr17:22473411-22473908 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-510 |
| Cow position: | chr17:22552775-22552278 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 312 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 303, 325 |
| Conread position: | 22-481 |
| Cow position: | chr17:22473336-22473795 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-498 |
| Cow position: | chr17:22452400-22451987 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 261 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 253, 245 |
| Conread position: | 105-498 |
| Cow position: | chr17:22590269-22589876 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 206, 202 |
| Conread position: | 121-481 |
| Cow position: | chr17:22473267-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 169-509 |
| Cow position: | chr17:22452400-22452060 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 63 |
| Conread position: | 185-484 |
| Cow position: | chr17:22499398-22499099 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 233, 224 |
Show alignments to all cow chromosomes.