Cow genome map

Conread name: rspl37_l12.y1

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 168, 160

Conread position: 1-195
Cow position:
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 168, 160

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 166, 156

Conread position: 1-278
Cow position:
Alignm length: 280
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 152, 148

Conread position: 1-279
Cow position:
Alignm length: 281
Alignm identity: 185
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 149, 165

Conread position: 1-321
Cow position:
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 60, 53

Conread position: 1-369
Cow position:
Alignm length: 373
Alignm identity: 250
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 58, 53

Conread position: 1-375
Cow position:
Alignm length: 378
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 97

Conread position: 1-427
Cow position:
Alignm length: 429
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 1-427
Cow position:
Alignm length: 427
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-437
Cow position:
Alignm length: 438
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 162

Conread position: 1-446
Cow position:
Alignm length: 451
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 53

Conread position: 1-449
Cow position:
Alignm length: 454
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-456
Cow position:
Alignm length: 462
Alignm identity: 299
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 81, 70

Conread position: 1-468
Cow position:
Alignm length: 471
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 235

Conread position: 1-470
Cow position:
Alignm length: 472
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 327

Conread position: 1-479
Cow position:
Alignm length: 480
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 338, 329

Conread position: 1-480
Cow position:
Alignm length: 483
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 160

Conread position: 1-480
Cow position:
Alignm length: 482
Alignm identity: 297
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 253, 246

Conread position: 1-480
Cow position:
Alignm length: 482
Alignm identity: 302
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 253, 246

Conread position: 1-481
Cow position:
Alignm length: 484
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 81

Conread position: 1-481
Cow position:
Alignm length: 487
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 75

Conread position: 1-481
Cow position:
Alignm length: 483
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 408

Conread position: 1-481
Cow position:
Alignm length: 481
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-481
Cow position:
Alignm length: 483
Alignm identity: 296
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 248, 262

Conread position: 1-481
Cow position:
Alignm length: 485
Alignm identity: 294
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 19

Conread position: 1-483
Cow position:
Alignm length: 484
Alignm identity: 299
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 252, 236

Conread position: 1-484
Cow position:
Alignm length: 486
Alignm identity: 296
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 91, 87

Conread position: 1-485
Cow position:
Alignm length: 489
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 155

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 168

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 160

Conread position: 1-487
Cow position:
Alignm length: 490
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 83

Conread position: 1-488
Cow position:
Alignm length: 492
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 1-489
Cow position:
Alignm length: 493
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 235

Conread position: 1-489
Cow position:
Alignm length: 493
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 235

Conread position: 1-491
Cow position:
Alignm length: 493
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 162

Conread position: 1-491
Cow position:
Alignm length: 492
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 161

Conread position: 1-493
Cow position:
Alignm length: 493
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-493
Cow position:
Alignm length: 496
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 160

Conread position: 1-497
Cow position:
Alignm length: 504
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 1-497
Cow position:
Alignm length: 502
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 78

Conread position: 1-498
Cow position:
Alignm length: 501
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 1-500
Cow position:
Alignm length: 502
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 153

Conread position: 1-500
Cow position:
Alignm length: 506
Alignm identity: 319
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 91, 87

Conread position: 1-508
Cow position:
Alignm length: 511
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 160

Conread position: 1-509
Cow position:
Alignm length: 513
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 53

Conread position: 1-510
Cow position:
Alignm length: 515
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 317
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 28, 248

Conread position: 1-510
Cow position:
Alignm length: 514
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 155

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 349

Conread position: 1-510
Cow position:
Alignm length: 514
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 159

Conread position: 2-471
Cow position:
Alignm length: 473
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 78

Conread position: 2-500
Cow position:
Alignm length: 517
Alignm identity: 298
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 285, 340

Conread position: 4-492
Cow position:
Alignm length: 494
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 99

Conread position: 6-481
Cow position:
Alignm length: 479
Alignm identity: 296
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 77, 61

Conread position: 6-481
Cow position:
Alignm length: 482
Alignm identity: 305
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 140, 130

Conread position: 7-510
Cow position:
Alignm length: 506
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 79

Conread position: 7-510
Cow position:
Alignm length: 507
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 78

Conread position: 8-469
Cow position:
Alignm length: 466
Alignm identity: 279
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 46

Conread position: 13-480
Cow position:
Alignm length: 473
Alignm identity: 290
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 70, 52

Conread position: 13-491
Cow position:
Alignm length: 485
Alignm identity: 307
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 236, 249

Conread position: 16-479
Cow position:
Alignm length: 464
Alignm identity: 287
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 18-487
Cow position:
Alignm length: 472
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 316

Conread position: 19-398
Cow position:
Alignm length: 386
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 38

Conread position: 21-459
Cow position:
Alignm length: 445
Alignm identity: 274
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 63

Conread position: 25-470
Cow position:
Alignm length: 449
Alignm identity: 288
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 61, 51

Conread position: 27-471
Cow position:
Alignm length: 447
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 211

Conread position: 31-487
Cow position:
Alignm length: 459
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 140

Conread position: 35-510
Cow position:
Alignm length: 479
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 125

Conread position: 46-510
Cow position:
Alignm length: 466
Alignm identity: 290
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 288, 11

Conread position: 69-510
Cow position:
Alignm length: 444
Alignm identity: 273
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 265, 259

Conread position: 85-498
Cow position:
Alignm length: 420
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 18

Conread position: 86-492
Cow position:
Alignm length: 408
Alignm identity: 262
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 335, 323

Conread position: 95-500
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 10

Conread position: 95-508
Cow position:
Alignm length: 415
Alignm identity: 258
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 69, 6

Conread position: 108-510
Cow position:
Alignm length: 405
Alignm identity: 254
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 43, 53

Conread position: 114-479
Cow position:
Alignm length: 369
Alignm identity: 224
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 47

Conread position: 114-493
Cow position:
Alignm length: 385
Alignm identity: 237
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 47

Conread position: 161-479
Cow position:
Alignm length: 322
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 26

Conread position: 169-491
Cow position:
Alignm length: 323
Alignm identity: 212
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 178-488
Cow position:
Alignm length: 315
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 129

Conread position: 205-498
Cow position:
Alignm length: 295
Alignm identity: 186
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 133

Conread position: 270-510
Cow position:
Alignm length: 241
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.