Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-195 |
| Cow position: | chr22:12475485-12475291 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 168, 160 |
| Conread position: | 1-195 |
| Cow position: | chr22:12499774-12499968 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 168, 160 |
| Conread position: | 1-211 |
| Cow position: | chr22:14430718-14430928 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 166, 156 |
| Conread position: | 1-278 |
| Cow position: | chr22:12475569-12475292 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 152, 148 |
| Conread position: | 1-279 |
| Cow position: | chr22:12458040-12457762 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 149, 165 |
| Conread position: | 1-321 |
| Cow position: | chr22:11701333-11701653 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-369 |
| Cow position: | chr22:11641090-11641458 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 250 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 1-375 |
| Cow position: | chr22:14430550-14430924 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 1-427 |
| Cow position: | chr22:12385350-12384924 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 1-427 |
| Cow position: | chr22:12458208-12457782 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-437 |
| Cow position: | chr22:12399192-12398756 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-446 |
| Cow position: | chr22:12499522-12499967 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 1-449 |
| Cow position: | chr22:11641006-11641454 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-456 |
| Cow position: | chr22:11666511-11666966 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 1-468 |
| Cow position: | chr22:12431172-12430705 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 235 |
| Conread position: | 1-470 |
| Cow position: | chr22:12432432-12431963 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 327 |
| Conread position: | 1-479 |
| Cow position: | chr22:12431760-12431283 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 329 |
| Conread position: | 1-480 |
| Cow position: | chr22:12399360-12398881 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 1-480 |
| Cow position: | chr22:12476409-12475930 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 1-480 |
| Cow position: | chr22:12498850-12499329 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 302 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 1-481 |
| Cow position: | chr22:11640922-11641402 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 81 |
| Conread position: | 1-481 |
| Cow position: | chr22:11701165-11701645 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 75 |
| Conread position: | 1-481 |
| Cow position: | chr22:12418963-12418483 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 408 |
| Conread position: | 1-481 |
| Cow position: | chr22:12458544-12458064 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-481 |
| Cow position: | chr22:14429710-14430190 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 248, 262 |
| Conread position: | 1-481 |
| Cow position: | chr22:14467955-14468435 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 1-483 |
| Cow position: | chr22:12432264-12431782 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 299 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 252, 236 |
| Conread position: | 1-484 |
| Cow position: | chr22:46654329-46654812 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 91, 87 |
| Conread position: | 1-485 |
| Cow position: | chr22:12399444-12398960 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-487 |
| Cow position: | chr22:11640838-11641324 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 168 |
| Conread position: | 1-487 |
| Cow position: | chr22:12399528-12399042 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-487 |
| Cow position: | chr22:12431676-12431190 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 160 |
| Conread position: | 1-487 |
| Cow position: | chr22:12432096-12431610 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 1-488 |
| Cow position: | chr22:12399780-12399293 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-489 |
| Cow position: | chr22:12476157-12475669 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 235 |
| Conread position: | 1-489 |
| Cow position: | chr22:12499102-12499590 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 235 |
| Conread position: | 1-491 |
| Cow position: | chr22:12475821-12475331 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-491 |
| Cow position: | chr22:12499438-12499928 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 161 |
| Conread position: | 1-493 |
| Cow position: | chr22:11640670-11641162 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-493 |
| Cow position: | chr22:12475905-12475413 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 1-497 |
| Cow position: | chr22:12385688-12385190 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 1-497 |
| Cow position: | chr22:12499354-12499850 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 78 |
| Conread position: | 1-498 |
| Cow position: | chr22:12458292-12457795 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-500 |
| Cow position: | chr22:12431088-12430589 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 153 |
| Conread position: | 1-500 |
| Cow position: | chr22:46654161-46654660 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 319 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 91, 87 |
| Conread position: | 1-508 |
| Cow position: | chr22:12431844-12431337 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 1-509 |
| Cow position: | chr22:12431424-12430916 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-510 |
| Cow position: | chr22:11640754-11641263 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-510 |
| Cow position: | chr22:12385436-12384925 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 28, 248 |
| Conread position: | 1-510 |
| Cow position: | chr22:12399696-12399187 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-510 |
| Cow position: | chr22:12499186-12499695 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 69 |
| Conread position: | 1-510 |
| Cow position: | chr22:12499270-12499779 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 349 |
| Conread position: | 1-510 |
| Cow position: | chr22:46654077-46654586 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 159 |
| Conread position: | 2-471 |
| Cow position: | chr22:12458627-12458158 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 2-500 |
| Cow position: | chr22:12419315-12418801 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 298 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 285, 340 |
| Conread position: | 4-492 |
| Cow position: | chr22:11640589-11641077 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 99 |
| Conread position: | 6-481 |
| Cow position: | chr22:14430387-14430862 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 77, 61 |
| Conread position: | 6-481 |
| Cow position: | chr22:14468044-14468519 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 305 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 140, 130 |
| Conread position: | 7-510 |
| Cow position: | chr22:12476235-12475732 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 79 |
| Conread position: | 7-510 |
| Cow position: | chr22:12499024-12499527 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 8-469 |
| Cow position: | chr22:14468130-14468591 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 13-480 |
| Cow position: | chr22:14430142-14430609 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 13-491 |
| Cow position: | chr22:46654005-46654483 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 236, 249 |
| Conread position: | 16-479 |
| Cow position: | chr22:14429641-14430104 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 287 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-487 |
| Cow position: | chr22:12432499-12432030 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 316 |
| Conread position: | 19-398 |
| Cow position: | chr22:14468225-14468604 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 21-459 |
| Cow position: | chr22:14430486-14430924 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 25-470 |
| Cow position: | chr22:12399918-12399479 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 288 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 27-471 |
| Cow position: | chr22:12399838-12399394 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 211 |
| Conread position: | 31-487 |
| Cow position: | chr22:11701111-11701567 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 140 |
| Conread position: | 35-510 |
| Cow position: | chr22:12419013-12418538 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 125 |
| Conread position: | 46-510 |
| Cow position: | chr22:12476446-12475984 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 288, 11 |
| Conread position: | 69-510 |
| Cow position: | chr22:12498834-12499275 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 265, 259 |
| Conread position: | 85-498 |
| Cow position: | chr22:12385688-12385273 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 86-492 |
| Cow position: | chr22:12458627-12458221 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 262 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 335, 323 |
| Conread position: | 95-500 |
| Cow position: | chr22:12399930-12399534 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 269 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 75, 10 |
| Conread position: | 95-508 |
| Cow position: | chr22:12432589-12432177 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 69, 6 |
| Conread position: | 108-510 |
| Cow position: | chr22:12419024-12418622 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 114-479 |
| Cow position: | chr22:11701110-11701475 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 114-493 |
| Cow position: | chr22:11666456-11666836 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 161-479 |
| Cow position: | chr22:14467947-14468264 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 169-491 |
| Cow position: | chr22:12498850-12499172 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 178-488 |
| Cow position: | chr22:46654002-46654312 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 129 |
| Conread position: | 205-498 |
| Cow position: | chr22:11640622-11640915 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 133 |
| Conread position: | 270-510 |
| Cow position: | chr22:12432499-12432259 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.