Cow genome map

Conread name: rspl37_l12.y1

Conread position: 1-266
Cow position: chr25:34769473-34769208 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-278
Cow position: chr25:22236060-22236337 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-278
Cow position: chr25:36801690-36801967 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 177
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 248, 240

Conread position: 1-283
Cow position: chr25:326986-327268 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 187
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 149, 159

Conread position: 1-284
Cow position: chr25:34732041-34731757 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 181
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 51, 81

Conread position: 1-310
Cow position: chr25:33157074-33156765 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 147, 155

Conread position: 1-312
Cow position: chr25:36801606-36801917 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 211
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 130, 124

Conread position: 1-317
Cow position: chr25:346511-346827 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 58

Conread position: 1-324
Cow position: chr25:22235976-22236299 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 212
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 166, 146

Conread position: 1-324
Cow position: chr25:33157158-33156835 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 79, 85

Conread position: 1-326
Cow position: chr25:34763393-34763715 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 0

Conread position: 1-335
Cow position: chr25:33299550-33299881 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 217, 232

Conread position: 1-355
Cow position: chr25:34714181-34714535 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 159

Conread position: 1-360
Cow position: chr25:33145077-33145436 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 328, 335

Conread position: 1-390
Cow position: chr25:36800946-36801335 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 143, 167

Conread position: 1-413
Cow position: chr25:33305256-33304849 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 260
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 212, 139

Conread position: 1-413
Cow position: chr25:34763309-34763718 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 251
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 325, 147

Conread position: 1-414
Cow position: chr25:23420446-23420859 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 260
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 85, 75

Conread position: 1-444
Cow position: chr25:33127781-33128224 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 161

Conread position: 1-446
Cow position: chr25:33299382-33299827 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 277
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 334, 329

Conread position: 1-450
Cow position: chr25:34447421-34447861 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 292
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 150, 159

Conread position: 1-469
Cow position: chr25:33305571-33305124 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 292
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 70

Conread position: 1-470
Cow position: chr25:34732461-34731992 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 297
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 85

Conread position: 1-471
Cow position: chr25:326392-326862 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 285
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 88, 75

Conread position: 1-474
Cow position: chr25:33305901-33305433 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 280
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 169, 81

Conread position: 1-475
Cow position: chr25:34447085-34447559 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 420

Conread position: 1-479
Cow position: chr25:33157326-33156848 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 159

Conread position: 1-480
Cow position: chr25:33144912-33145388 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 300
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 60, 53

Conread position: 1-480
Cow position: chr25:33298710-33299189 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 61, 72

Conread position: 1-481
Cow position: chr25:36800778-36801258 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 292
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 85

Conread position: 1-484
Cow position: chr25:33298626-33299109 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 307
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 76

Conread position: 1-491
Cow position: chr25:25652251-25652741 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 306
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 85

Conread position: 1-491
Cow position: chr25:33298878-33299368 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 324

Conread position: 1-491
Cow position: chr25:34769809-34769319 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 148

Conread position: 1-492
Cow position: chr25:33299214-33299705 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 310
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 70

Conread position: 1-492
Cow position: chr25:34447169-34447660 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 155

Conread position: 1-492
Cow position: chr25:34769725-34769234 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 78

Conread position: 1-492
Cow position: chr25:34770061-34769570 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 246

Conread position: 1-493
Cow position: chr25:33157494-33157002 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-493
Cow position: chr25:34447001-34447493 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 156

Conread position: 1-493
Cow position: chr25:34763225-34763714 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 312
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 149, 154

Conread position: 1-498
Cow position: chr25:326560-327062 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 316
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 156, 172

Conread position: 1-498
Cow position: chr25:33157410-33156913 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-498
Cow position: chr25:34447337-34447826 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 321
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 78, 85

Conread position: 1-498
Cow position: chr25:34770145-34769648 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 337

Conread position: 1-500
Cow position: chr25:34732545-34732047 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 311
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 147, 159

Conread position: 1-501
Cow position: chr25:34762892-34763388 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 316
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 149, 154

Conread position: 1-507
Cow position: chr25:36800694-36801200 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 311
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 168, 155

Conread position: 1-509
Cow position: chr25:33298962-33299470 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 232

Conread position: 1-510
Cow position: chr25:326728-327243 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 319
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 115, 101

Conread position: 1-510
Cow position: chr25:33299298-33299807 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 312
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 333, 327

Conread position: 1-510
Cow position: chr25:33306156-33305650 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 322
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 61, 107

Conread position: 3-489
Cow position: chr25:23420364-23420850 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 82

Conread position: 3-509
Cow position: chr25:34713763-34714269 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 293
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 19

Conread position: 4-481
Cow position: chr25:33157575-33157098 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 54

Conread position: 5-222
Cow position: chr25:34433003-34433220 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 164, 159

Conread position: 7-488
Cow position: chr25:34763145-34763625 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 299
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 14, 150

Conread position: 8-446
Cow position: chr25:36801530-36801967 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 287
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 303, 6

Conread position: 10-498
Cow position: chr25:34446926-34447414 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 21

Conread position: 12-510
Cow position: chr25:33298469-33298967 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 298
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 145, 150

Conread position: 13-474
Cow position: chr25:36800874-36801335 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 302
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 211, 220

Conread position: 13-492
Cow position: chr25:36801366-36801845 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 300
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 157, 136

Conread position: 13-510
Cow position: chr25:25652515-25653012 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 310
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 157

Conread position: 14-510
Cow position: chr25:33306055-33305566 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 300
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 69, 78

Conread position: 16-306
Cow position: chr25:33305724-33305433 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 52

Conread position: 16-402
Cow position: chr25:34732614-34732228 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 248
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 16-510
Cow position: chr25:36801453-36801947 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 311
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 46

Conread position: 17-491
Cow position: chr25:22235823-22236298 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 131

Conread position: 18-509
Cow position: chr25:36801215-36801694 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 302
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 58

Conread position: 19-491
Cow position: chr25:33144846-33145315 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 299
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 120

Conread position: 20-313
Cow position: chr25:414698-414407 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 130, 138

Conread position: 21-319
Cow position: chr25:34732105-34731807 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 189
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 59, 65

Conread position: 22-480
Cow position: chr25:25652860-25653318 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 278
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 127, 146

Conread position: 23-267
Cow position: chr25:427330-427574 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 23-364
Cow position: chr25:326924-327265 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 212
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 147

Conread position: 24-471
Cow position: chr25:36800633-36801080 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 276
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 158, 150

Conread position: 24-480
Cow position: chr25:33298565-33299021 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 288
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 126, 134

Conread position: 24-481
Cow position: chr25:34473509-34473963 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 272
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 77

Conread position: 25-510
Cow position: chr25:34714037-34714522 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 293
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 61

Conread position: 32-398
Cow position: chr25:34733999-34733633 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 230
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 138, 118

Conread position: 32-509
Cow position: chr25:33127728-33128205 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 214

Conread position: 35-492
Cow position: chr25:33127646-33128104 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 291

Conread position: 43-498
Cow position: chr25:23420320-23420775 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 36

Conread position: 44-444
Cow position: chr25:33145036-33145436 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 125, 116

Conread position: 45-507
Cow position: chr25:326352-326814 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 287
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 113, 137

Conread position: 70-402
Cow position: chr25:18642207-18641872 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 9

Conread position: 81-311
Cow position: chr25:427304-427534 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 73

Conread position: 83-434
Cow position: chr25:366702-367053 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 215
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 209, 215

Conread position: 84-481
Cow position: chr25:34763140-34763534 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 251
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 84

Conread position: 85-510
Cow position: chr25:34770145-34769720 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 277
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 85, 63

Conread position: 96-499
Cow position: chr25:22235819-22236222 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 263
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 23, 5

Conread position: 99-486
Cow position: chr25:34732615-34732228 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 241
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 57

Conread position: 101-510
Cow position: chr25:346443-346852 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 244
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 57

Conread position: 104-448
Cow position: chr25:326920-327265 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 6, 70

Conread position: 104-497
Cow position: chr25:34433522-34433911 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 252
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 44, 50

Conread position: 169-509
Cow position: chr25:34433503-34433840 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 79

Conread position: 190-498
Cow position: chr25:366725-367033 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 190-510
Cow position: chr25:34446938-34447258 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 203
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 58

Conread position: 214-481
Cow position: chr25:414751-414489 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 121, 54

Conread position: 214-490
Cow position: chr25:346472-346748 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 162, 168

Conread position: 235-492
Cow position: chr25:34770163-34769906 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.