Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-195 |
| Cow position: | chr28:9290481-9290675 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-281 |
| Cow position: | chr28:33210375-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 51, 67 |
| Conread position: | 1-283 |
| Cow position: | chr28:9299284-9299566 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 153, 135 |
| Conread position: | 1-375 |
| Cow position: | chr28:7810570-7810944 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 228 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 8 |
| Conread position: | 1-389 |
| Cow position: | chr28:9298797-9299182 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-413 |
| Cow position: | chr28:7757899-7758311 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 147, 155 |
| Conread position: | 1-414 |
| Cow position: | chr28:9290233-9290642 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-436 |
| Cow position: | chr28:11333906-11333471 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 249, 240 |
| Conread position: | 1-443 |
| Cow position: | chr28:34696143-34696585 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 154 |
| Conread position: | 1-450 |
| Cow position: | chr28:7758387-7758835 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 1-450 |
| Cow position: | chr28:9253166-9253615 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 1-452 |
| Cow position: | chr28:7810327-7810769 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 158 |
| Conread position: | 1-460 |
| Cow position: | chr28:9298713-9299169 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 1-470 |
| Cow position: | chr28:7757731-7758200 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 302 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 83, 78 |
| Conread position: | 1-470 |
| Cow position: | chr28:9252913-9253383 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 28, 153 |
| Conread position: | 1-471 |
| Cow position: | chr28:7757563-7758033 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 1-479 |
| Cow position: | chr28:9299046-9299510 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 252, 140 |
| Conread position: | 1-488 |
| Cow position: | chr28:34673418-34673905 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-493 |
| Cow position: | chr28:7757815-7758307 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 53 |
| Conread position: | 1-498 |
| Cow position: | chr28:9290151-9290642 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 403, 56 |
| Conread position: | 1-506 |
| Cow position: | chr28:34695891-34696396 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 502, 493 |
| Conread position: | 1-510 |
| Cow position: | chr28:7757479-7757988 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 147 |
| Conread position: | 1-510 |
| Cow position: | chr28:9253082-9253591 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 324 |
| Conread position: | 1-510 |
| Cow position: | chr28:34696059-34696568 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-492 |
| Cow position: | chr28:11334073-11333583 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 59 |
| Conread position: | 2-510 |
| Cow position: | chr28:34695724-34696232 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-510 |
| Cow position: | chr28:7757397-7757904 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 322 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 5-500 |
| Cow position: | chr28:11334154-11333660 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 82, 74 |
| Conread position: | 9-510 |
| Cow position: | chr28:34695983-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 151 |
| Conread position: | 12-459 |
| Cow position: | chr28:7810497-7810944 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 74, 67 |
| Conread position: | 16-470 |
| Cow position: | chr28:9298561-9299012 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 287 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 19-510 |
| Cow position: | chr28:9299218-9299706 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 22-413 |
| Cow position: | chr28:33210228-33210620 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 137 |
| Conread position: | 23-506 |
| Cow position: | chr28:34695829-34696312 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-492 |
| Cow position: | chr28:7810327-7810725 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 100-497 |
| Cow position: | chr28:9298561-9298956 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 243 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 67, 106 |
| Conread position: | 105-510 |
| Cow position: | chr28:7758323-7758728 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 220, 229 |
| Conread position: | 106-501 |
| Cow position: | chr28:33210228-33210623 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 113-487 |
| Cow position: | chr28:34673362-34673736 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 317, 311 |
| Conread position: | 189-500 |
| Cow position: | chr28:33210227-33210537 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 70, 75 |
Show alignments to all cow chromosomes.