Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-231 |
| Cow position: | chr6:49396776-49397006 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-303 |
| Cow position: | chr6:49362642-49362948 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 1-310 |
| Cow position: | chr6:49396692-49397001 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-415 |
| Cow position: | chr6:49341055-49341467 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 268 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 327, 333 |
| Conread position: | 1-437 |
| Cow position: | chr6:49362402-49362826 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 135 |
| Conread position: | 1-452 |
| Cow position: | chr6:49340971-49341422 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 147 |
| Conread position: | 1-476 |
| Cow position: | chr6:49396524-49396999 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-481 |
| Cow position: | chr6:49428795-49429275 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 159 |
| Conread position: | 1-490 |
| Cow position: | chr6:49340635-49341124 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 1-498 |
| Cow position: | chr6:49340467-49340964 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-498 |
| Cow position: | chr6:49340719-49341216 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 135 |
| Conread position: | 1-500 |
| Cow position: | chr6:49429047-49429544 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 246 |
| Conread position: | 1-509 |
| Cow position: | chr6:49396272-49396780 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-509 |
| Cow position: | chr6:49396440-49396948 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 154 |
| Conread position: | 1-510 |
| Cow position: | chr6:49340887-49341396 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 337 |
| Conread position: | 1-510 |
| Cow position: | chr6:49395942-49396445 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 0 |
| Conread position: | 1-510 |
| Cow position: | chr6:49396194-49396697 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 1-510 |
| Cow position: | chr6:49396356-49396865 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-510 |
| Cow position: | chr6:49428291-49428800 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 179 |
| Conread position: | 1-510 |
| Cow position: | chr6:49428627-49429136 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 154 |
| Conread position: | 1-510 |
| Cow position: | chr6:49428879-49429388 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 159 |
| Conread position: | 6-490 |
| Cow position: | chr6:49340388-49340872 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 329 |
| Conread position: | 7-481 |
| Cow position: | chr6:49428465-49428939 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 154 |
| Conread position: | 10-510 |
| Cow position: | chr6:49362327-49362815 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 278, 0 |
| Conread position: | 11-510 |
| Cow position: | chr6:49428385-49428884 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 149 |
| Conread position: | 11-510 |
| Cow position: | chr6:49428553-49429052 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 149 |
| Conread position: | 12-493 |
| Cow position: | chr6:49362005-49362474 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 211, 229 |
| Conread position: | 13-510 |
| Cow position: | chr6:49395872-49396361 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 302 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 18-510 |
| Cow position: | chr6:49395791-49396277 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 482, 440 |
| Conread position: | 105-509 |
| Cow position: | chr6:49340403-49340807 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-510 |
| Cow position: | chr6:49428231-49428632 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 210-501 |
| Cow position: | chr6:49428248-49428539 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-488 |
| Cow position: | chr6:49340364-49340618 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 17 |
Show alignments to all cow chromosomes.