Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-279 |
| Cow position: | chr7:3180600-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 149, 154 |
| Conread position: | 1-311 |
| Cow position: | chr7:1438396-1438706 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 82 |
| Conread position: | 1-389 |
| Cow position: | chr7:1439870-1440257 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 169, 105 |
| Conread position: | 1-399 |
| Cow position: | chr7:8243701-8244096 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 160, 146 |
| Conread position: | 1-414 |
| Cow position: | chr7:11601040-11600627 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-439 |
| Cow position: | chr7:42878709-42878271 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 319 |
| Conread position: | 1-455 |
| Cow position: | chr7:1015002-1015456 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 84 |
| Conread position: | 1-457 |
| Cow position: | chr7:3180348-3180802 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 1-470 |
| Cow position: | chr7:8277323-8277792 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 146, 154 |
| Conread position: | 1-470 |
| Cow position: | chr7:11600956-11600487 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 148, 170 |
| Conread position: | 1-470 |
| Cow position: | chr7:28846570-28847039 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 279 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 260, 246 |
| Conread position: | 1-471 |
| Cow position: | chr7:1014750-1015220 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 314 |
| Conread position: | 1-479 |
| Cow position: | chr7:8243617-8244092 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 286 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 241, 230 |
| Conread position: | 1-480 |
| Cow position: | chr7:8324964-8325443 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 67 |
| Conread position: | 1-481 |
| Cow position: | chr7:8242946-8243425 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 224, 244 |
| Conread position: | 1-481 |
| Cow position: | chr7:8243030-8243509 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 301 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 1-481 |
| Cow position: | chr7:8325384-8325864 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 307 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 247, 232 |
| Conread position: | 1-481 |
| Cow position: | chr7:8325636-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 232 |
| Conread position: | 1-481 |
| Cow position: | chr7:42879213-42878733 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-483 |
| Cow position: | chr7:8243449-8243931 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 145, 161 |
| Conread position: | 1-485 |
| Cow position: | chr7:8277743-8278227 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 299 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 242, 232 |
| Conread position: | 1-488 |
| Cow position: | chr7:18390309-18390796 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 308 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 149, 173 |
| Conread position: | 1-491 |
| Cow position: | chr7:18390225-18390715 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 257 |
| Conread position: | 1-492 |
| Cow position: | chr7:1439704-1440192 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 306 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 1-492 |
| Cow position: | chr7:42878877-42878386 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 334, 329 |
| Conread position: | 1-493 |
| Cow position: | chr7:42879045-42878553 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 312 |
| Conread position: | 1-497 |
| Cow position: | chr7:3180096-3180592 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 431, 425 |
| Conread position: | 1-498 |
| Cow position: | chr7:1014834-1015331 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 246 |
| Conread position: | 1-501 |
| Cow position: | chr7:1439616-1440116 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 1-506 |
| Cow position: | chr7:3179928-3180433 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 335 |
| Conread position: | 1-507 |
| Cow position: | chr7:1014918-1015424 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-507 |
| Cow position: | chr7:3180180-3180686 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 330 |
| Conread position: | 1-508 |
| Cow position: | chr7:1014420-1014921 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 316 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 324, 231 |
| Conread position: | 1-508 |
| Cow position: | chr7:3180012-3180519 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 84 |
| Conread position: | 1-510 |
| Cow position: | chr7:3179760-3180269 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 337 |
| Conread position: | 1-510 |
| Cow position: | chr7:3180264-3180773 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-510 |
| Cow position: | chr7:42878793-42878284 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-510 |
| Cow position: | chr7:42878961-42878452 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 160 |
| Conread position: | 1-510 |
| Cow position: | chr7:42879129-42878620 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 329 |
| Conread position: | 2-401 |
| Cow position: | chr7:11434668-11434276 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 79, 67 |
| Conread position: | 3-470 |
| Cow position: | chr7:1439451-1439919 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 63, 83 |
| Conread position: | 3-471 |
| Cow position: | chr7:1014668-1015136 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 322 |
| Conread position: | 5-492 |
| Cow position: | chr7:11601204-11600717 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 74 |
| Conread position: | 7-418 |
| Cow position: | chr7:3180438-3180849 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 150 |
| Conread position: | 7-481 |
| Cow position: | chr7:11601118-11600644 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 72 |
| Conread position: | 7-491 |
| Cow position: | chr7:18390147-18390631 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 152 |
| Conread position: | 13-314 |
| Cow position: | chr7:8278091-8278392 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 148, 137 |
| Conread position: | 13-324 |
| Cow position: | chr7:11600776-11600465 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 68, 73 |
| Conread position: | 13-471 |
| Cow position: | chr7:8325228-8325686 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 55 |
| Conread position: | 13-479 |
| Cow position: | chr7:1014516-1014976 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 210, 123 |
| Conread position: | 13-479 |
| Cow position: | chr7:8243294-8243759 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 150, 86 |
| Conread position: | 13-480 |
| Cow position: | chr7:8243545-8244010 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 248, 254 |
| Conread position: | 13-481 |
| Cow position: | chr7:8242874-8243342 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 310, 318 |
| Conread position: | 13-481 |
| Cow position: | chr7:8324892-8325360 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 58, 48 |
| Conread position: | 13-484 |
| Cow position: | chr7:8325564-8326035 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 55 |
| Conread position: | 13-485 |
| Cow position: | chr7:8277839-8278311 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 312 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 73, 56 |
| Conread position: | 16-481 |
| Cow position: | chr7:11434822-11434364 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 139 |
| Conread position: | 19-470 |
| Cow position: | chr7:8324730-8325181 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 284 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 140, 129 |
| Conread position: | 19-481 |
| Cow position: | chr7:8277257-8277719 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 277 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 243, 237 |
| Conread position: | 23-471 |
| Cow position: | chr7:8277597-8278045 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 27-471 |
| Cow position: | chr7:8242804-8243248 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 279 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 29-481 |
| Cow position: | chr7:8277519-8277971 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 141, 121 |
| Conread position: | 46-500 |
| Cow position: | chr7:42879252-42878799 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 287 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 104, 115 |
| Conread position: | 83-509 |
| Cow position: | chr7:42879299-42878873 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 242, 253 |
| Conread position: | 85-470 |
| Cow position: | chr7:1014168-1014553 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 231 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 232, 260 |
| Conread position: | 85-471 |
| Cow position: | chr7:1439870-1440255 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 168, 101 |
| Conread position: | 98-481 |
| Cow position: | chr7:11434824-11434448 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 150, 133 |
| Conread position: | 100-457 |
| Cow position: | chr7:1014267-1014624 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 216, 238 |
| Conread position: | 103-470 |
| Cow position: | chr7:8277257-8277624 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 169-470 |
| Cow position: | chr7:3179676-3179977 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 20 |
Show alignments to all cow chromosomes.