Cow genome map

Conread name: rspl37_l12.y1

Conread position: 1-279
Cow position:
Alignm length: 281
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 149, 154

Conread position: 1-311
Cow position:
Alignm length: 313
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 82

Conread position: 1-389
Cow position:
Alignm length: 391
Alignm identity: 248
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 169, 105

Conread position: 1-399
Cow position:
Alignm length: 402
Alignm identity: 248
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 146

Conread position: 1-414
Cow position:
Alignm length: 417
Alignm identity: 264
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 85, 78

Conread position: 1-439
Cow position:
Alignm length: 440
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 319

Conread position: 1-455
Cow position:
Alignm length: 457
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 84

Conread position: 1-457
Cow position:
Alignm length: 461
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 246

Conread position: 1-470
Cow position:
Alignm length: 475
Alignm identity: 295
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 146, 154

Conread position: 1-470
Cow position:
Alignm length: 473
Alignm identity: 286
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 170

Conread position: 1-470
Cow position:
Alignm length: 472
Alignm identity: 279
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 260, 246

Conread position: 1-471
Cow position:
Alignm length: 472
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 314

Conread position: 1-479
Cow position:
Alignm length: 484
Alignm identity: 286
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 241, 230

Conread position: 1-480
Cow position:
Alignm length: 486
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 82, 67

Conread position: 1-481
Cow position:
Alignm length: 486
Alignm identity: 296
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 224, 244

Conread position: 1-481
Cow position:
Alignm length: 486
Alignm identity: 301
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 78, 96

Conread position: 1-481
Cow position:
Alignm length: 487
Alignm identity: 307
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 247, 232

Conread position: 1-481
Cow position:
Alignm length: 485
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 232

Conread position: 1-481
Cow position:
Alignm length: 481
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-483
Cow position:
Alignm length: 489
Alignm identity: 298
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 145, 161

Conread position: 1-485
Cow position:
Alignm length: 488
Alignm identity: 299
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 242, 232

Conread position: 1-488
Cow position:
Alignm length: 491
Alignm identity: 308
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 149, 173

Conread position: 1-491
Cow position:
Alignm length: 495
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 257

Conread position: 1-492
Cow position:
Alignm length: 496
Alignm identity: 306
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 152, 56

Conread position: 1-492
Cow position:
Alignm length: 493
Alignm identity: 304
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 334, 329

Conread position: 1-493
Cow position:
Alignm length: 495
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 312

Conread position: 1-497
Cow position:
Alignm length: 498
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 425

Conread position: 1-498
Cow position:
Alignm length: 501
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 246

Conread position: 1-501
Cow position:
Alignm length: 510
Alignm identity: 314
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 17

Conread position: 1-506
Cow position:
Alignm length: 508
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 335

Conread position: 1-507
Cow position:
Alignm length: 512
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 162

Conread position: 1-507
Cow position:
Alignm length: 508
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 330

Conread position: 1-508
Cow position:
Alignm length: 509
Alignm identity: 316
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 324, 231

Conread position: 1-508
Cow position:
Alignm length: 510
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 84

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 337

Conread position: 1-510
Cow position:
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 1-510
Cow position:
Alignm length: 510
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-510
Cow position:
Alignm length: 513
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 160

Conread position: 1-510
Cow position:
Alignm length: 512
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 329

Conread position: 2-401
Cow position:
Alignm length: 401
Alignm identity: 246
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 67

Conread position: 3-470
Cow position:
Alignm length: 478
Alignm identity: 291
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 83

Conread position: 3-471
Cow position:
Alignm length: 470
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 322

Conread position: 5-492
Cow position:
Alignm length: 492
Alignm identity: 291
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 74

Conread position: 7-418
Cow position:
Alignm length: 416
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 150

Conread position: 7-481
Cow position:
Alignm length: 480
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 72

Conread position: 7-491
Cow position:
Alignm length: 491
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 152

Conread position: 13-314
Cow position:
Alignm length: 306
Alignm identity: 194
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 148, 137

Conread position: 13-324
Cow position:
Alignm length: 314
Alignm identity: 203
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 68, 73

Conread position: 13-471
Cow position:
Alignm length: 462
Alignm identity: 291
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 78, 55

Conread position: 13-479
Cow position:
Alignm length: 472
Alignm identity: 298
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 210, 123

Conread position: 13-479
Cow position:
Alignm length: 469
Alignm identity: 282
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 86

Conread position: 13-480
Cow position:
Alignm length: 472
Alignm identity: 292
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 248, 254

Conread position: 13-481
Cow position:
Alignm length: 470
Alignm identity: 286
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 310, 318

Conread position: 13-481
Cow position:
Alignm length: 477
Alignm identity: 294
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 48

Conread position: 13-484
Cow position:
Alignm length: 476
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 55

Conread position: 13-485
Cow position:
Alignm length: 481
Alignm identity: 312
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 73, 56

Conread position: 16-481
Cow position:
Alignm length: 469
Alignm identity: 283
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 148, 139

Conread position: 19-470
Cow position:
Alignm length: 454
Alignm identity: 284
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 140, 129

Conread position: 19-481
Cow position:
Alignm length: 466
Alignm identity: 277
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 243, 237

Conread position: 23-471
Cow position:
Alignm length: 452
Alignm identity: 279
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 47

Conread position: 27-471
Cow position:
Alignm length: 451
Alignm identity: 279
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 54, 43

Conread position: 29-481
Cow position:
Alignm length: 457
Alignm identity: 284
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 141, 121

Conread position: 46-500
Cow position:
Alignm length: 457
Alignm identity: 287
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 115

Conread position: 83-509
Cow position:
Alignm length: 429
Alignm identity: 267
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 242, 253

Conread position: 85-470
Cow position:
Alignm length: 389
Alignm identity: 231
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 232, 260

Conread position: 85-471
Cow position:
Alignm length: 389
Alignm identity: 254
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 168, 101

Conread position: 98-481
Cow position:
Alignm length: 386
Alignm identity: 236
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 150, 133

Conread position: 100-457
Cow position:
Alignm length: 362
Alignm identity: 227
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 216, 238

Conread position: 103-470
Cow position:
Alignm length: 370
Alignm identity: 238
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 61, 43

Conread position: 169-470
Cow position:
Alignm length: 305
Alignm identity: 194
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 20

Show alignments to all cow chromosomes.