Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-314 |
| Cow position: | chr8:45201669-45201982 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 166, 158 |
| Conread position: | 1-324 |
| Cow position: | chr8:55581389-55581712 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-389 |
| Cow position: | chr8:45201585-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-397 |
| Cow position: | chr8:55581305-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 256 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 1-429 |
| Cow position: | chr8:55581221-55581649 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 275 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 252, 245 |
| Conread position: | 1-434 |
| Cow position: | chr8:45201501-45201934 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 78 |
| Conread position: | 1-434 |
| Cow position: | chr8:48406727-48406294 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 85 |
| Conread position: | 1-471 |
| Cow position: | chr8:55580885-55581355 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 247 |
| Conread position: | 1-479 |
| Cow position: | chr8:48406895-48406417 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 299 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-479 |
| Cow position: | chr8:48407567-48407089 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-480 |
| Cow position: | chr8:46816780-46817259 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 1-485 |
| Cow position: | chr8:48406979-48406495 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 1-491 |
| Cow position: | chr8:48407063-48406573 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 253, 247 |
| Conread position: | 1-492 |
| Cow position: | chr8:46816360-46816851 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-492 |
| Cow position: | chr8:48407483-48406992 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 330 |
| Conread position: | 1-492 |
| Cow position: | chr8:55581053-55581544 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 1-492 |
| Cow position: | chr8:55581137-55581628 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-493 |
| Cow position: | chr8:46816192-46816684 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 335, 326 |
| Conread position: | 1-497 |
| Cow position: | chr8:46816108-46816604 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 335 |
| Conread position: | 1-498 |
| Cow position: | chr8:48407315-48406818 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 337 |
| Conread position: | 1-509 |
| Cow position: | chr8:45201081-45201589 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 139 |
| Conread position: | 1-509 |
| Cow position: | chr8:46816528-46817036 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 135 |
| Conread position: | 1-510 |
| Cow position: | chr8:45201165-45201674 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 333, 327 |
| Conread position: | 1-510 |
| Cow position: | chr8:45201249-45201758 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 1-510 |
| Cow position: | chr8:45201333-45201842 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-510 |
| Cow position: | chr8:45201417-45201926 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 324, 336 |
| Conread position: | 1-510 |
| Cow position: | chr8:46816444-46816953 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-510 |
| Cow position: | chr8:46816864-46817373 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 502, 494 |
| Conread position: | 3-502 |
| Cow position: | chr8:45200999-45201497 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 333 |
| Conread position: | 4-492 |
| Cow position: | chr8:46815940-46816431 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 306 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 13-510 |
| Cow position: | chr8:46816036-46816533 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 317 |
| Conread position: | 16-498 |
| Cow position: | chr8:55580816-55581298 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 133 |
| Conread position: | 19-483 |
| Cow position: | chr8:55580987-55581451 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 130 |
| Conread position: | 24-509 |
| Cow position: | chr8:45200936-45201421 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 301 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 82-510 |
| Cow position: | chr8:48406730-48406302 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 274 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 406, 413 |
| Conread position: | 97-510 |
| Cow position: | chr8:46815865-46816281 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 127-502 |
| Cow position: | chr8:6958059-6957686 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 232 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 190-510 |
| Cow position: | chr8:48407628-48407310 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 269-510 |
| Cow position: | chr8:48407635-48407394 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 69, 61 |
Show alignments to all cow chromosomes.