Cow genome map
| Conread name: | rspl37_l12.y1 |
| Conread position: | 1-364 |
| Cow position: | chrX:25310205-25310568 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 1-373 |
| Cow position: | chrX:29045029-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 333, 324 |
| Conread position: | 1-448 |
| Cow position: | chrX:25324684-25324237 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 154, 135 |
| Conread position: | 1-450 |
| Cow position: | chrX:29045113-29044663 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 1-471 |
| Cow position: | chrX:25309785-25310255 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 302 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 168, 161 |
| Conread position: | 1-480 |
| Cow position: | chrX:25309953-25310432 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 321 |
| Conread position: | 1-481 |
| Cow position: | chrX:13826801-13826321 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-481 |
| Cow position: | chrX:25310037-25310517 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 72 |
| Conread position: | 1-481 |
| Cow position: | chrX:25325440-25324960 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 162 |
| Conread position: | 1-488 |
| Cow position: | chrX:25325524-25325037 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 155 |
| Conread position: | 1-491 |
| Cow position: | chrX:13826717-13826227 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 298 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 150, 161 |
| Conread position: | 1-492 |
| Cow position: | chrX:25325020-25324529 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 1-492 |
| Cow position: | chrX:29045197-29044706 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 1-492 |
| Cow position: | chrX:29045281-29044790 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 124 |
| Conread position: | 1-500 |
| Cow position: | chrX:25325188-25324690 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 239 |
| Conread position: | 1-509 |
| Cow position: | chrX:25325104-25324596 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 138 |
| Conread position: | 1-510 |
| Cow position: | chrX:25309869-25310378 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 313 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 315, 332 |
| Conread position: | 1-510 |
| Cow position: | chrX:25324768-25324259 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 335 |
| Conread position: | 1-510 |
| Cow position: | chrX:25324852-25324343 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 159 |
| Conread position: | 1-510 |
| Cow position: | chrX:25324936-25324427 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 162 |
| Conread position: | 1-510 |
| Cow position: | chrX:25325272-25324763 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 219 |
| Conread position: | 1-510 |
| Cow position: | chrX:25325692-25325183 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 78 |
| Conread position: | 1-510 |
| Cow position: | chrX:25325776-25325267 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 308 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 70 |
| Conread position: | 2-479 |
| Cow position: | chrX:12627586-12628062 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 8, 13 |
| Conread position: | 3-509 |
| Cow position: | chrX:25325606-25325100 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 7-317 |
| Cow position: | chrX:29045758-29045448 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-471 |
| Cow position: | chrX:25309713-25310171 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 240, 234 |
| Conread position: | 37-454 |
| Cow position: | chrX:13826933-13826516 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 262 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 109, 124 |
| Conread position: | 85-510 |
| Cow position: | chrX:14181327-14180902 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 263 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 102-492 |
| Cow position: | chrX:25325843-25325453 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 103-451 |
| Cow position: | chrX:29045746-29045400 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 235, 223 |
| Conread position: | 119-510 |
| Cow position: | chrX:29045331-29044940 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 120-498 |
| Cow position: | chrX:13826934-13826557 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 117, 130 |
| Conread position: | 178-469 |
| Cow position: | chrX:29045755-29045464 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 147, 154 |
| Conread position: | 204-510 |
| Cow position: | chrX:25309736-25310042 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 125, 111 |
| Conread position: | 252-470 |
| Cow position: | chrX:25309700-25309918 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 27, 38 |
Show alignments to all cow chromosomes.