Cow genome map
| Conread name: | rspl40_a19.y1 |
| Conread position: | 1-145 |
| Cow position: | chr10:51221098-51221246 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-203 |
| Cow position: | chr10:41794743-41794945 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 5, 185 |
| Conread position: | 1-218 |
| Cow position: | chr10:25354233-25354031 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-238 |
| Cow position: | chr10:19590799-19591032 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 15, 87 |
| Conread position: | 1-244 |
| Cow position: | chr10:64596393-64596156 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 1-262 |
| Cow position: | chr10:66753203-66752928 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 49, 245 |
| Conread position: | 1-305 |
| Cow position: | chr10:58399317-58399609 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 123 |
| Conread position: | 2-250 |
| Cow position: | chr10:50776671-50776424 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 192 |
| Conread position: | 3-229 |
| Cow position: | chr10:37822761-37822986 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 79, 49 |
| Conread position: | 3-251 |
| Cow position: | chr10:25971085-25970853 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 78, 130 |
| Conread position: | 3-261 |
| Cow position: | chr10:40906279-40906021 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 3-274 |
| Cow position: | chr10:48388310-48388574 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 212, 16 |
| Conread position: | 4-213 |
| Cow position: | chr10:30497589-30497397 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 4-229 |
| Cow position: | chr10:30450104-30450318 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 22, 14 |
| Conread position: | 4-240 |
| Cow position: | chr10:52589729-52589963 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 152 |
| Conread position: | 4-247 |
| Cow position: | chr10:1976354-1976597 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 65, 163 |
| Conread position: | 4-248 |
| Cow position: | chr10:6986407-6986174 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 4-251 |
| Cow position: | chr10:2407169-2407389 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 4-255 |
| Cow position: | chr10:11032532-11032782 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 152 |
| Conread position: | 4-255 |
| Cow position: | chr10:29279403-29279161 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 4-257 |
| Cow position: | chr10:17175995-17175746 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 106, 15 |
| Conread position: | 4-259 |
| Cow position: | chr10:15868211-15867947 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 4-264 |
| Cow position: | chr10:65130700-65130955 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 4-268 |
| Cow position: | chr10:39081358-39081095 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 4-270 |
| Cow position: | chr10:62286516-62286252 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 4-274 |
| Cow position: | chr10:25479064-25478803 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 160 |
| Conread position: | 4-274 |
| Cow position: | chr10:29339428-29339697 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 4-288 |
| Cow position: | chr10:6568196-6567919 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 62 |
| Conread position: | 4-288 |
| Cow position: | chr10:10124304-10124024 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 21 |
| Conread position: | 5-137 |
| Cow position: | chr10:19126944-19127079 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-143 |
| Cow position: | chr10:25978316-25978454 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 117 |
| Conread position: | 5-164 |
| Cow position: | chr10:17699054-17699213 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 136 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 107, 51 |
| Conread position: | 5-175 |
| Cow position: | chr10:24292237-24292407 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 5-189 |
| Cow position: | chr10:9568665-9568845 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 5-210 |
| Cow position: | chr10:6038375-6038575 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 5-227 |
| Cow position: | chr10:11060159-11059944 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 5-233 |
| Cow position: | chr10:59153691-59153902 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 5-236 |
| Cow position: | chr10:31855292-31855063 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 5-236 |
| Cow position: | chr10:69558884-69558661 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 5-247 |
| Cow position: | chr10:20109982-20110208 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-262 |
| Cow position: | chr10:60358685-60358443 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 14, 83 |
| Conread position: | 5-274 |
| Cow position: | chr10:41984928-41985191 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 86 |
| Conread position: | 5-274 |
| Cow position: | chr10:56705626-56705886 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 5-275 |
| Cow position: | chr10:23056121-23056386 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 71, 25 |
| Conread position: | 6-264 |
| Cow position: | chr10:49038540-49038267 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 16, 267 |
| Conread position: | 7-148 |
| Cow position: | chr10:50044690-50044831 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 7-251 |
| Cow position: | chr10:16432342-16432588 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 7-292 |
| Cow position: | chr10:55012099-55011819 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 8-253 |
| Cow position: | chr10:3180665-3180902 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 40 |
| Conread position: | 8-255 |
| Cow position: | chr10:9341774-9342023 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 97 |
| Conread position: | 8-255 |
| Cow position: | chr10:10468939-10468694 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 8-273 |
| Cow position: | chr10:8077188-8077455 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 251 |
| Conread position: | 8-274 |
| Cow position: | chr10:1055949-1056215 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 8-274 |
| Cow position: | chr10:27576426-27576175 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 206 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 23, 118 |
| Conread position: | 9-227 |
| Cow position: | chr10:22341526-22341308 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 9-234 |
| Cow position: | chr10:6490808-6491036 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 8, 125 |
| Conread position: | 9-239 |
| Cow position: | chr10:63276348-63276122 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 9-240 |
| Cow position: | chr10:8413095-8413320 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 9 |
| Conread position: | 9-254 |
| Cow position: | chr10:6012079-6012317 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 9-255 |
| Cow position: | chr10:36231930-36231702 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 9-256 |
| Cow position: | chr10:16649954-16650204 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 75, 156 |
| Conread position: | 9-256 |
| Cow position: | chr10:24548213-24547973 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 9-256 |
| Cow position: | chr10:34655156-34655397 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 9-256 |
| Cow position: | chr10:37818599-37818845 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 9-256 |
| Cow position: | chr10:52046820-52046580 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 95 |
| Conread position: | 9-262 |
| Cow position: | chr10:40646482-40646248 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 54, 67 |
| Conread position: | 9-262 |
| Cow position: | chr10:42454085-42453847 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 22 |
| Conread position: | 9-274 |
| Cow position: | chr10:64876474-64876214 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 76, 22 |
| Conread position: | 9-315 |
| Cow position: | chr10:58746290-58746580 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 238, 40 |
| Conread position: | 10-201 |
| Cow position: | chr10:38739502-38739321 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 178, 61 |
| Conread position: | 10-236 |
| Cow position: | chr10:3998860-3998639 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 10-236 |
| Cow position: | chr10:52113715-52113931 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 10-238 |
| Cow position: | chr10:23506534-23506753 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 75 |
| Conread position: | 10-240 |
| Cow position: | chr10:36896356-36896130 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 70 |
| Conread position: | 10-247 |
| Cow position: | chr10:22652656-22652417 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 10-248 |
| Cow position: | chr10:2449303-2449074 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 223, 70 |
| Conread position: | 10-256 |
| Cow position: | chr10:19104217-19104468 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 10-256 |
| Cow position: | chr10:30455894-30456141 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 75, 131 |
| Conread position: | 10-256 |
| Cow position: | chr10:37528650-37528891 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 10-267 |
| Cow position: | chr10:23948966-23949219 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 106, 54 |
| Conread position: | 10-271 |
| Cow position: | chr10:10720718-10720976 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 10-274 |
| Cow position: | chr10:62516836-62516571 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 261 |
| Conread position: | 10-289 |
| Cow position: | chr10:21424721-21425001 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 156 |
| Conread position: | 11-210 |
| Cow position: | chr10:64042039-64041842 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 82 |
| Conread position: | 11-247 |
| Cow position: | chr10:51779083-51779306 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 11-251 |
| Cow position: | chr10:24755470-24755706 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 11-256 |
| Cow position: | chr10:35975505-35975274 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 11-274 |
| Cow position: | chr10:20478853-20478583 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 12 |
| Conread position: | 11-274 |
| Cow position: | chr10:64878035-64878299 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 149 |
| Conread position: | 11-279 |
| Cow position: | chr10:13311685-13311424 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 12-229 |
| Cow position: | chr10:69544383-69544590 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 12-248 |
| Cow position: | chr10:805150-804917 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 39, 45 |
| Conread position: | 12-262 |
| Cow position: | chr10:24745080-24744835 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 246, 63 |
| Conread position: | 12-274 |
| Cow position: | chr10:888880-888623 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 13-251 |
| Cow position: | chr10:9083250-9083018 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 89, 66 |
| Conread position: | 13-253 |
| Cow position: | chr10:48255271-48255506 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 13-274 |
| Cow position: | chr10:67144542-67144291 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 13-288 |
| Cow position: | chr10:24786058-24785788 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 14-247 |
| Cow position: | chr10:38449344-38449575 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 136, 80 |
| Conread position: | 14-256 |
| Cow position: | chr10:48462385-48462628 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 80 |
| Conread position: | 14-259 |
| Cow position: | chr10:50200666-50200417 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 158 |
| Conread position: | 15-210 |
| Cow position: | chr10:53820965-53821153 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 15-250 |
| Cow position: | chr10:8760187-8760404 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 15-256 |
| Cow position: | chr10:35026429-35026194 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 78 |
| Conread position: | 15-256 |
| Cow position: | chr10:35862273-35862516 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 10, 68 |
| Conread position: | 15-256 |
| Cow position: | chr10:64182404-64182165 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 15-257 |
| Cow position: | chr10:24753101-24752871 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 15-288 |
| Cow position: | chr10:22049213-22048928 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 147 |
| Conread position: | 16-236 |
| Cow position: | chr10:9445064-9445279 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 67, 76 |
| Conread position: | 16-247 |
| Cow position: | chr10:58259568-58259792 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 16-256 |
| Cow position: | chr10:44783295-44783055 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 88 |
| Conread position: | 16-263 |
| Cow position: | chr10:65132909-65132667 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 115, 66 |
| Conread position: | 16-287 |
| Cow position: | chr10:41255934-41255673 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 213, 139 |
| Conread position: | 17-245 |
| Cow position: | chr10:32417302-32417091 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 17-261 |
| Cow position: | chr10:2394518-2394752 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 19-179 |
| Cow position: | chr10:17928088-17927932 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 19-218 |
| Cow position: | chr10:45606477-45606675 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 19-228 |
| Cow position: | chr10:30937055-30937254 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 19-268 |
| Cow position: | chr10:48377694-48377943 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 134, 63 |
| Conread position: | 19-272 |
| Cow position: | chr10:31266386-31266624 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 20-193 |
| Cow position: | chr10:38429601-38429771 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 120, 42 |
| Conread position: | 20-218 |
| Cow position: | chr10:20517214-20517015 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 20-251 |
| Cow position: | chr10:58608055-58607828 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 119 |
| Conread position: | 20-256 |
| Cow position: | chr10:19704569-19704789 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 231, 49 |
| Conread position: | 20-317 |
| Cow position: | chr10:68251518-68251229 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 220 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 81, 59 |
| Conread position: | 21-165 |
| Cow position: | chr10:23135271-23135134 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 21-175 |
| Cow position: | chr10:22977718-22977876 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 57, 105 |
| Conread position: | 21-247 |
| Cow position: | chr10:21447961-21448170 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 21-254 |
| Cow position: | chr10:20569083-20568852 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 5 |
| Conread position: | 21-256 |
| Cow position: | chr10:19678816-19678582 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 21-287 |
| Cow position: | chr10:20505484-20505226 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 21-309 |
| Cow position: | chr10:65791776-65791499 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 40 |
| Conread position: | 22-213 |
| Cow position: | chr10:25866090-25865896 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 105, 67 |
| Conread position: | 23-270 |
| Cow position: | chr10:10048625-10048388 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 25-274 |
| Cow position: | chr10:55122736-55122490 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 58, 190 |
| Conread position: | 25-274 |
| Cow position: | chr10:61588321-61588566 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 25-315 |
| Cow position: | chr10:57461295-57461019 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 245, 57 |
| Conread position: | 26-248 |
| Cow position: | chr10:28933684-28933464 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 27-256 |
| Cow position: | chr10:31910878-31910660 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 28-255 |
| Cow position: | chr10:46468748-46468978 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 175 |
| Conread position: | 28-256 |
| Cow position: | chr10:6915067-6915283 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 28-256 |
| Cow position: | chr10:51925359-51925134 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 127 |
| Conread position: | 29-255 |
| Cow position: | chr10:57458654-57458434 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 29-256 |
| Cow position: | chr10:46491102-46491315 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 32-229 |
| Cow position: | chr10:32066056-32065863 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 71, 52 |
| Conread position: | 38-268 |
| Cow position: | chr10:47493275-47493504 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 177 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 188, 117 |
| Conread position: | 40-247 |
| Cow position: | chr10:44855014-44854807 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 179, 29 |
| Conread position: | 41-203 |
| Cow position: | chr10:875214-875045 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 43-246 |
| Cow position: | chr10:41151733-41151541 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 6 |
| Conread position: | 56-257 |
| Cow position: | chr10:8206731-8206918 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 100 |
Show alignments to all cow chromosomes.