Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-121
Cow position: chr11:37372280-37372160 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 79

Conread position: 1-246
Cow position: chr11:76395748-76395508 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 41

Conread position: 1-247
Cow position: chr11:11752547-11752790 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 148, 0

Conread position: 1-250
Cow position: chr11:46001701-46001956 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 151

Conread position: 2-216
Cow position: chr11:28691789-28691997 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 0

Conread position: 2-252
Cow position: chr11:67745292-67745051 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 3-268
Cow position: chr11:11125630-11125368 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 23

Conread position: 4-161
Cow position: chr11:55821737-55821895 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 102, 0

Conread position: 4-167
Cow position: chr11:13592701-13592542 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 19

Conread position: 4-240
Cow position: chr11:16262059-16262296 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 76

Conread position: 4-251
Cow position: chr11:377676-377926 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 79, 100

Conread position: 4-251
Cow position: chr11:30110928-30110696 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 4-251
Cow position: chr11:56892786-56892544 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 57

Conread position: 4-254
Cow position: chr11:43644135-43644377 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 61

Conread position: 4-256
Cow position: chr11:10076734-10076494 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 15

Conread position: 4-256
Cow position: chr11:24585147-24584899 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 79

Conread position: 4-256
Cow position: chr11:34963033-34962782 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 11, 161

Conread position: 4-256
Cow position: chr11:53262745-53262490 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 53, 100

Conread position: 4-256
Cow position: chr11:65857826-65857577 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 177
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 28

Conread position: 4-256
Cow position: chr11:87155486-87155232 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 79, 28

Conread position: 4-262
Cow position: chr11:15125012-15125267 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 52

Conread position: 4-277
Cow position: chr11:8827745-8827479 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 89

Conread position: 4-289
Cow position: chr11:48474669-48474394 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 253, 14

Conread position: 4-320
Cow position: chr11:41272104-41271794 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 79

Conread position: 5-113
Cow position: chr11:51745323-51745214 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 5-142
Cow position: chr11:31894242-31894107 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 45

Conread position: 5-164
Cow position: chr11:69402283-69402439 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 94

Conread position: 5-187
Cow position: chr11:9083443-9083260 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 88

Conread position: 5-218
Cow position: chr11:67236367-67236165 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 5-233
Cow position: chr11:45872352-45872576 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 78, 19

Conread position: 5-243
Cow position: chr11:27681466-27681232 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 5-245
Cow position: chr11:18144851-18145074 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 171
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 55

Conread position: 5-251
Cow position: chr11:8828663-8828904 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 5-253
Cow position: chr11:20491538-20491296 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 5-255
Cow position: chr11:47565972-47566233 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 5-256
Cow position: chr11:19238190-19238437 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 30

Conread position: 5-256
Cow position: chr11:42232573-42232335 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 123

Conread position: 5-256
Cow position: chr11:53452380-53452626 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 145

Conread position: 5-256
Cow position: chr11:78990014-78990254 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 5-257
Cow position: chr11:38845296-38845544 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 210, 66

Conread position: 5-267
Cow position: chr11:46399091-46398835 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 18

Conread position: 5-274
Cow position: chr11:8232602-8232862 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 48

Conread position: 5-287
Cow position: chr11:48983091-48982801 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 13, 45

Conread position: 5-313
Cow position: chr11:39808958-39808651 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 75

Conread position: 6-113
Cow position: chr11:23047780-23047882 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 6-193
Cow position: chr11:877066-876882 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 156
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 99

Conread position: 6-254
Cow position: chr11:74929753-74929502 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 80

Conread position: 7-251
Cow position: chr11:14308601-14308363 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 79, 0

Conread position: 7-256
Cow position: chr11:40818673-40818925 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 82

Conread position: 7-275
Cow position: chr11:37160751-37160488 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 72

Conread position: 8-162
Cow position: chr11:48011998-48012145 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 8-210
Cow position: chr11:35668750-35668953 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 8-238
Cow position: chr11:83587994-83587779 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 8-247
Cow position: chr11:16000891-16000657 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 0

Conread position: 8-249
Cow position: chr11:66265563-66265333 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 131, 0

Conread position: 8-250
Cow position: chr11:62739184-62738941 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 65

Conread position: 8-254
Cow position: chr11:46473716-46473964 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 8-274
Cow position: chr11:9253054-9253320 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 67, 132

Conread position: 8-278
Cow position: chr11:34113227-34112972 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 97, 74

Conread position: 8-301
Cow position: chr11:48650759-48650470 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 9-138
Cow position: chr11:9874282-9874154 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 32

Conread position: 9-226
Cow position: chr11:64904960-64904745 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 80, 73

Conread position: 9-228
Cow position: chr11:35153863-35154080 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 9-238
Cow position: chr11:62574042-62574261 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 63

Conread position: 9-240
Cow position: chr11:11460457-11460233 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 9, 135

Conread position: 9-240
Cow position: chr11:32438990-32439213 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 35

Conread position: 9-246
Cow position: chr11:30952552-30952789 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 61

Conread position: 9-251
Cow position: chr11:45646632-45646866 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 73

Conread position: 9-255
Cow position: chr11:70382729-70382974 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 72, 92

Conread position: 9-263
Cow position: chr11:56796779-56797025 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 217, 95

Conread position: 9-272
Cow position: chr11:7333759-7334017 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 9-275
Cow position: chr11:65988193-65987930 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 147

Conread position: 9-289
Cow position: chr11:34121727-34121442 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 274

Conread position: 9-289
Cow position: chr11:43526165-43526439 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 171, 112

Conread position: 9-304
Cow position: chr11:69491371-69491067 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 156

Conread position: 10-182
Cow position: chr11:75242607-75242439 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 94, 22

Conread position: 10-229
Cow position: chr11:63156947-63157166 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 70

Conread position: 11-235
Cow position: chr11:45889924-45889694 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 8

Conread position: 11-251
Cow position: chr11:17963992-17964229 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 109

Conread position: 11-251
Cow position: chr11:67747244-67747002 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 12

Conread position: 11-256
Cow position: chr11:65970421-65970174 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 11-270
Cow position: chr11:31901007-31900754 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 94

Conread position: 12-218
Cow position: chr11:57724863-57725071 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 94

Conread position: 12-247
Cow position: chr11:42519699-42519473 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 12-251
Cow position: chr11:55761830-55761604 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 12-255
Cow position: chr11:36301116-36301358 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 86

Conread position: 12-256
Cow position: chr11:59872892-59872646 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 82

Conread position: 12-256
Cow position: chr11:81066625-81066862 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 70

Conread position: 12-262
Cow position: chr11:48932625-48932870 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 246, 70

Conread position: 12-310
Cow position: chr11:42002985-42003288 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 71, 13

Conread position: 12-319
Cow position: chr11:10877202-10876886 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 16, 152

Conread position: 13-235
Cow position: chr11:24008034-24007828 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 213, 58

Conread position: 13-254
Cow position: chr11:29004389-29004160 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 13-255
Cow position: chr11:50951512-50951271 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 14-106
Cow position: chr11:12031948-12032040 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 14-175
Cow position: chr11:75232290-75232134 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 14-222
Cow position: chr11:4609875-4610081 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 145, 0

Conread position: 14-230
Cow position: chr11:2394105-2394304 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 10

Conread position: 14-238
Cow position: chr11:38794507-38794293 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 80

Conread position: 14-246
Cow position: chr11:68423030-68422810 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 14-251
Cow position: chr11:51043973-51044212 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 68

Conread position: 14-267
Cow position: chr11:30192136-30191877 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 12, 0

Conread position: 15-153
Cow position: chr11:78543892-78543754 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 15-208
Cow position: chr11:33348225-33348417 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 80

Conread position: 15-240
Cow position: chr11:34032245-34032460 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 67

Conread position: 15-247
Cow position: chr11:55744428-55744202 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 15-251
Cow position: chr11:1668633-1668399 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 76

Conread position: 15-256
Cow position: chr11:17860195-17860434 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 14, 75

Conread position: 15-289
Cow position: chr11:44855883-44856138 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 242, 58

Conread position: 16-229
Cow position: chr11:65955804-65956020 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 59, 146

Conread position: 16-247
Cow position: chr11:77208002-77207777 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 16-251
Cow position: chr11:40396278-40396052 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 0

Conread position: 16-266
Cow position: chr11:32609958-32609700 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 140, 66

Conread position: 16-268
Cow position: chr11:77683123-77682888 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 71, 86

Conread position: 17-218
Cow position: chr11:46413528-46413334 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 163
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 11, 33

Conread position: 17-251
Cow position: chr11:25331785-25332004 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 138, 0

Conread position: 17-254
Cow position: chr11:63508381-63508162 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 17-256
Cow position: chr11:8988269-8988510 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 9, 70

Conread position: 17-256
Cow position: chr11:65693883-65694117 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 18-296
Cow position: chr11:57111353-57111625 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 64

Conread position: 18-304
Cow position: chr11:64845602-64845317 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 8

Conread position: 19-223
Cow position: chr11:62808696-62808896 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 72, 63

Conread position: 19-304
Cow position: chr11:70399813-70399533 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 60

Conread position: 20-238
Cow position: chr11:32800288-32800072 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 91

Conread position: 20-238
Cow position: chr11:87169659-87169873 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 164
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 67, 24

Conread position: 20-254
Cow position: chr11:46770505-46770733 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 85, 52

Conread position: 20-255
Cow position: chr11:57047019-57047242 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 170, 5

Conread position: 20-256
Cow position: chr11:67951011-67951241 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 13, 61

Conread position: 20-262
Cow position: chr11:13039192-13039416 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 20-264
Cow position: chr11:67940648-67940419 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 21-240
Cow position: chr11:36799350-36799560 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 116

Conread position: 21-254
Cow position: chr11:48901130-48901356 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 21-256
Cow position: chr11:47169054-47169282 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 179, 126

Conread position: 21-268
Cow position: chr11:65826791-65827023 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 21-274
Cow position: chr11:53130762-53130514 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 58

Conread position: 21-302
Cow position: chr11:84924144-84924419 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 78, 22

Conread position: 21-304
Cow position: chr11:41577063-41577334 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 73

Conread position: 22-163
Cow position: chr11:70097234-70097096 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 78

Conread position: 22-256
Cow position: chr11:43914163-43913942 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 82

Conread position: 22-256
Cow position: chr11:53719893-53719665 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 22-256
Cow position: chr11:65495376-65495608 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 151

Conread position: 23-247
Cow position: chr11:17192333-17192553 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 132, 0

Conread position: 24-193
Cow position: chr11:47903801-47903633 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 51, 100

Conread position: 25-256
Cow position: chr11:68570719-68570952 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 57, 137

Conread position: 26-240
Cow position: chr11:38009869-38010076 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 26-256
Cow position: chr11:10095291-10095062 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 171, 56

Conread position: 28-244
Cow position: chr11:30165455-30165242 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 54

Conread position: 32-250
Cow position: chr11:63847788-63847577 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 38-247
Cow position: chr11:19269140-19269342 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 187, 111

Conread position: 41-249
Cow position: chr11:73473839-73474047 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 170

Conread position: 42-285
Cow position: chr11:65159519-65159753 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 58-255
Cow position: chr11:13690383-13690568 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.