Cow genome map


           Conread name:
           rspl40_a19.y1
        

               Conread position:
               1-127
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-131
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-184
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               1-196
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               15, 87
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 85
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 32
               

               Conread position:
               1-251
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               84, 157
               

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 152
               

               Conread position:
               1-263
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               1-275
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 80
               

               Conread position:
               1-303
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 301
               

               Conread position:
               2-143
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               2-274
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               224, 57
               

               Conread position:
               3-256
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               4-195
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 101
               

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               4-255
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 154
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               4-265
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               253, 14
               

               Conread position:
               4-291
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 19
               

               Conread position:
               5-175
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               141
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 70
               

               Conread position:
               5-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               5-247
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 146
               

               Conread position:
               5-250
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               215, 25
               

               Conread position:
               5-251
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               12, 214
               

               Conread position:
               5-262
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               236, 209
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               5-268
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 96
               

               Conread position:
               6-256
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               6-256
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               7-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               8-142
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               8-200
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               8-245
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               8-246
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               8-246
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               8-251
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               69, 63
               

               Conread position:
               8-252
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               8-256
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               8-256
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               8-256
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               15, 68
               

               Conread position:
               8-267
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               9-130
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               9-195
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               9-215
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               9-238
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               9-256
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 58
               

               Conread position:
               9-256
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               12, 74
               

               Conread position:
               9-256
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               9-266
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               9-274
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 44
               

               Conread position:
               9-289
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               9-305
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               10-251
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               10-254
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               24, 62
               

               Conread position:
               10-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               66, 22
               

               Conread position:
               10-268
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 9
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 76
               

               Conread position:
               11-201
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               11-256
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               12-200
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               158, 73
               

               Conread position:
               12-229
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               12-236
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 20
               

               Conread position:
               12-289
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               245, 91
               

               Conread position:
               13-168
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               13-201
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               13-254
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               13-273
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               14-240
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               14-247
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               14-256
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               15-213
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               15-247
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 65
               

               Conread position:
               15-256
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               15-256
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 91
               

               Conread position:
               16-256
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               94, 66
               

               Conread position:
               17-165
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               139, 82
               

               Conread position:
               17-228
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               17-256
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               17-348
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               203, 65
               

               Conread position:
               18-234
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               18-287
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               18-289
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               240, 57
               

               Conread position:
               19-239
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               19-247
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               19-289
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 23
               

               Conread position:
               20-181
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               20-262
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               238, 77
               

               Conread position:
               20-266
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 138
               

               Conread position:
               21-251
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               21-256
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               120, 10
               

               Conread position:
               21-256
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               21-256
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               21-274
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               22-251
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 134
               

               Conread position:
               24-275
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               25-255
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               178
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               32-261
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               37-256
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               46-256
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               37, 47
               

               Conread position:
               62-262
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 38
               
Show alignments to all cow chromosomes.