Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-218
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 31

Conread position: 1-229
Cow position:
Alignm length: 236
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 90

Conread position: 1-232
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 75, 205

Conread position: 1-247
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 27, 141

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 54

Conread position: 1-256
Cow position:
Alignm length: 258
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 67

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 2-256
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 40

Conread position: 4-158
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 0

Conread position: 4-161
Cow position:
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 4-213
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 62

Conread position: 4-229
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 4-234
Cow position:
Alignm length: 232
Alignm identity: 164
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 14, 58

Conread position: 4-236
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 11, 79

Conread position: 4-246
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 42, 38

Conread position: 4-251
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 30, 103

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 155, 66

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 4-256
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 152

Conread position: 4-256
Cow position:
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 136

Conread position: 4-268
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 24, 79

Conread position: 4-273
Cow position:
Alignm length: 272
Alignm identity: 202
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 97, 74

Conread position: 4-274
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 212

Conread position: 5-161
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 14

Conread position: 5-178
Cow position:
Alignm length: 174
Alignm identity: 140
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 5-206
Cow position:
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 66

Conread position: 5-210
Cow position:
Alignm length: 209
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 95

Conread position: 5-216
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 0

Conread position: 5-247
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 18

Conread position: 5-251
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 159

Conread position: 5-251
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 5-254
Cow position:
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 163

Conread position: 5-255
Cow position:
Alignm length: 252
Alignm identity: 183
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 221, 92

Conread position: 5-261
Cow position:
Alignm length: 258
Alignm identity: 201
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 16, 47

Conread position: 5-274
Cow position:
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 136

Conread position: 5-274
Cow position:
Alignm length: 274
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 93

Conread position: 5-284
Cow position:
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 149

Conread position: 5-299
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 11, 101

Conread position: 6-205
Cow position:
Alignm length: 200
Alignm identity: 150
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 7-228
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 88

Conread position: 7-254
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 19

Conread position: 7-256
Cow position:
Alignm length: 251
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 16

Conread position: 8-163
Cow position:
Alignm length: 156
Alignm identity: 126
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 8-178
Cow position:
Alignm length: 173
Alignm identity: 142
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 102, 46

Conread position: 8-183
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 154

Conread position: 8-198
Cow position:
Alignm length: 192
Alignm identity: 155
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 116, 52

Conread position: 8-247
Cow position:
Alignm length: 241
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 8-250
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 134

Conread position: 8-255
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 44, 0

Conread position: 8-269
Cow position:
Alignm length: 268
Alignm identity: 200
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 38

Conread position: 8-275
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 71

Conread position: 9-113
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-196
Cow position:
Alignm length: 188
Alignm identity: 154
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 9-240
Cow position:
Alignm length: 233
Alignm identity: 171
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 94, 23

Conread position: 9-250
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 9, 124

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 75

Conread position: 9-256
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 23

Conread position: 9-256
Cow position:
Alignm length: 258
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 162

Conread position: 9-263
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 94, 16

Conread position: 9-285
Cow position:
Alignm length: 281
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 18, 74

Conread position: 9-301
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 14, 79

Conread position: 9-305
Cow position:
Alignm length: 308
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 91

Conread position: 9-305
Cow position:
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 272

Conread position: 10-178
Cow position:
Alignm length: 169
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 10-245
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 127, 152

Conread position: 10-247
Cow position:
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 8, 87

Conread position: 10-251
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 61, 44

Conread position: 10-251
Cow position:
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 54

Conread position: 10-254
Cow position:
Alignm length: 245
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 10-266
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 0

Conread position: 10-274
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 136

Conread position: 11-251
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 96, 8

Conread position: 11-251
Cow position:
Alignm length: 241
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 11-261
Cow position:
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 14

Conread position: 12-256
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 11

Conread position: 12-256
Cow position:
Alignm length: 247
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 70

Conread position: 12-257
Cow position:
Alignm length: 256
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 63

Conread position: 12-274
Cow position:
Alignm length: 264
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 246, 13

Conread position: 12-289
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 9, 21

Conread position: 13-152
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 92

Conread position: 13-175
Cow position:
Alignm length: 168
Alignm identity: 138
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 13-177
Cow position:
Alignm length: 165
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 42, 0

Conread position: 13-212
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 92, 17

Conread position: 13-213
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 86, 19

Conread position: 13-256
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 157, 11

Conread position: 14-178
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 139, 0

Conread position: 14-218
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 14-240
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 71

Conread position: 14-245
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 86

Conread position: 14-251
Cow position:
Alignm length: 240
Alignm identity: 180
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 12, 78

Conread position: 14-265
Cow position:
Alignm length: 255
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 61

Conread position: 14-275
Cow position:
Alignm length: 263
Alignm identity: 198
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 39

Conread position: 15-237
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 87, 67

Conread position: 15-245
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 155, 39

Conread position: 15-261
Cow position:
Alignm length: 253
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 93

Conread position: 15-272
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 11, 0

Conread position: 16-240
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 95, 16

Conread position: 16-247
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 67, 77

Conread position: 16-264
Cow position:
Alignm length: 251
Alignm identity: 179
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 14, 67

Conread position: 17-183
Cow position:
Alignm length: 170
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 9

Conread position: 17-240
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 17-251
Cow position:
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 96

Conread position: 17-267
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 59, 71

Conread position: 19-204
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 6

Conread position: 19-218
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 47

Conread position: 19-247
Cow position:
Alignm length: 233
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 134

Conread position: 19-274
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 232, 60

Conread position: 19-330
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 10, 36

Conread position: 20-135
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 20-263
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 21-228
Cow position:
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 58

Conread position: 21-240
Cow position:
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 64

Conread position: 21-254
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 61

Conread position: 21-256
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 57, 0

Conread position: 22-232
Cow position:
Alignm length: 214
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 82

Conread position: 23-240
Cow position:
Alignm length: 218
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 24-246
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 137, 0

Conread position: 24-275
Cow position:
Alignm length: 256
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 97

Conread position: 25-213
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 26-247
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 27-251
Cow position:
Alignm length: 225
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 29-246
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 112

Conread position: 30-229
Cow position:
Alignm length: 204
Alignm identity: 165
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 37-218
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 38, 66

Conread position: 37-258
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 33

Conread position: 38-177
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.