Cow genome map
| Conread name: | rspl40_a19.y1 |
| Conread position: | 1-116 |
| Cow position: | chr16:37719146-37719031 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 1-143 |
| Cow position: | chr16:52222337-52222481 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1-175 |
| Cow position: | chr16:38620945-38620777 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-184 |
| Cow position: | chr16:54426153-54425970 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 120 |
| Conread position: | 1-216 |
| Cow position: | chr16:26156148-26156357 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 1-247 |
| Cow position: | chr16:4979790-4979563 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 1-247 |
| Cow position: | chr16:11522914-11523179 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 71, 237 |
| Conread position: | 1-251 |
| Cow position: | chr16:30572612-30572868 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 199 |
| Conread position: | 1-255 |
| Cow position: | chr16:23066651-23066407 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 5, 88 |
| Conread position: | 1-271 |
| Cow position: | chr16:5243959-5243687 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 159 |
| Conread position: | 2-234 |
| Cow position: | chr16:23025332-23025102 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 2-245 |
| Cow position: | chr16:2308674-2308433 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 128 |
| Conread position: | 2-252 |
| Cow position: | chr16:42257437-42257197 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 2-256 |
| Cow position: | chr16:37442131-37442390 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 13, 137 |
| Conread position: | 3-239 |
| Cow position: | chr16:3634097-3633870 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 3-256 |
| Cow position: | chr16:3614732-3614486 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 4-163 |
| Cow position: | chr16:13792674-13792829 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 4-218 |
| Cow position: | chr16:13683774-13683994 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 4-220 |
| Cow position: | chr16:8322998-8323212 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 4-251 |
| Cow position: | chr16:25965488-25965249 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 101, 67 |
| Conread position: | 4-251 |
| Cow position: | chr16:37452630-37452873 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 79, 102 |
| Conread position: | 4-255 |
| Cow position: | chr16:11008329-11008083 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 211, 78 |
| Conread position: | 4-255 |
| Cow position: | chr16:30639321-30639080 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 45 |
| Conread position: | 4-256 |
| Cow position: | chr16:15808960-15808712 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 144, 78 |
| Conread position: | 4-256 |
| Cow position: | chr16:18141342-18141591 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 4-256 |
| Cow position: | chr16:51112894-51113138 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 17 |
| Conread position: | 4-256 |
| Cow position: | chr16:51869623-51869376 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 4-257 |
| Cow position: | chr16:24672373-24672622 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 4-263 |
| Cow position: | chr16:7639976-7639725 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 4-266 |
| Cow position: | chr16:53267709-53267457 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 4-291 |
| Cow position: | chr16:27005190-27004902 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 159 |
| Conread position: | 5-119 |
| Cow position: | chr16:46680817-46680702 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-122 |
| Cow position: | chr16:12072625-12072508 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-134 |
| Cow position: | chr16:26134385-26134512 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 5-150 |
| Cow position: | chr16:22872384-22872527 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 5-160 |
| Cow position: | chr16:51994987-51994835 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 96 |
| Conread position: | 5-178 |
| Cow position: | chr16:25803418-25803589 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 140, 19 |
| Conread position: | 5-180 |
| Cow position: | chr16:45693132-45692955 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-201 |
| Cow position: | chr16:10303762-10303960 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 154 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-240 |
| Cow position: | chr16:31419430-31419199 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 118 |
| Conread position: | 5-240 |
| Cow position: | chr16:52577441-52577213 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 5-247 |
| Cow position: | chr16:18557281-18557519 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 222, 14 |
| Conread position: | 5-253 |
| Cow position: | chr16:50113947-50113711 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 5-254 |
| Cow position: | chr16:51069933-51070189 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 171 |
| Conread position: | 5-255 |
| Cow position: | chr16:34210423-34210674 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 135 |
| Conread position: | 5-256 |
| Cow position: | chr16:23990497-23990749 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 5-256 |
| Cow position: | chr16:27013879-27013638 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 5-264 |
| Cow position: | chr16:3628797-3628549 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 5-275 |
| Cow position: | chr16:11643334-11643080 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 5-286 |
| Cow position: | chr16:22786063-22786337 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 98, 151 |
| Conread position: | 6-218 |
| Cow position: | chr16:12360995-12361196 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 16 |
| Conread position: | 6-254 |
| Cow position: | chr16:16424620-16424864 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 6-256 |
| Cow position: | chr16:28833819-28833580 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-256 |
| Cow position: | chr16:48494574-48494818 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 6-256 |
| Cow position: | chr16:49126207-49126445 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 6-265 |
| Cow position: | chr16:39385390-39385131 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 7-228 |
| Cow position: | chr16:13601098-13601305 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 7-246 |
| Cow position: | chr16:31558876-31558640 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 19 |
| Conread position: | 8-247 |
| Cow position: | chr16:18427168-18426932 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 8-251 |
| Cow position: | chr16:46253706-46253946 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 67, 156 |
| Conread position: | 8-256 |
| Cow position: | chr16:28111937-28112178 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 149 |
| Conread position: | 8-262 |
| Cow position: | chr16:36930336-36930588 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 149 |
| Conread position: | 9-206 |
| Cow position: | chr16:12060396-12060201 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 9-213 |
| Cow position: | chr16:25463757-25463554 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 9, 165 |
| Conread position: | 9-218 |
| Cow position: | chr16:32781345-32781138 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 9-234 |
| Cow position: | chr16:10148261-10148041 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 74, 149 |
| Conread position: | 9-256 |
| Cow position: | chr16:28922764-28922527 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 96, 22 |
| Conread position: | 9-257 |
| Cow position: | chr16:47820547-47820308 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 155, 66 |
| Conread position: | 9-267 |
| Cow position: | chr16:13791496-13791239 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 9-270 |
| Cow position: | chr16:4910546-4910804 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 150 |
| Conread position: | 9-274 |
| Cow position: | chr16:48398275-48398526 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 52 |
| Conread position: | 9-275 |
| Cow position: | chr16:17745815-17745551 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 9-275 |
| Cow position: | chr16:53613284-53613017 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 74, 81 |
| Conread position: | 9-304 |
| Cow position: | chr16:11153209-11153500 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 131 |
| Conread position: | 10-251 |
| Cow position: | chr16:9845729-9845970 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 10-256 |
| Cow position: | chr16:4763112-4762869 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 75 |
| Conread position: | 10-270 |
| Cow position: | chr16:4712879-4712625 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 10-274 |
| Cow position: | chr16:11105532-11105277 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 10-274 |
| Cow position: | chr16:20633898-20634149 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 73 |
| Conread position: | 11-241 |
| Cow position: | chr16:54515704-54515480 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 5, 76 |
| Conread position: | 11-275 |
| Cow position: | chr16:20025427-20025162 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 12-212 |
| Cow position: | chr16:21905143-21904944 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 12-256 |
| Cow position: | chr16:50906450-50906207 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 13-173 |
| Cow position: | chr16:47368736-47368575 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 130, 61 |
| Conread position: | 13-175 |
| Cow position: | chr16:43815886-43815732 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 13-247 |
| Cow position: | chr16:4875971-4875745 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 13-266 |
| Cow position: | chr16:44973472-44973221 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 91 |
| Conread position: | 13-271 |
| Cow position: | chr16:7665612-7665356 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 13-274 |
| Cow position: | chr16:16546049-16545788 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 41 |
| Conread position: | 14-128 |
| Cow position: | chr16:31490059-31489944 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 14-218 |
| Cow position: | chr16:51530992-51531197 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 93 |
| Conread position: | 14-234 |
| Cow position: | chr16:7152195-7152414 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 14-237 |
| Cow position: | chr16:23810889-23810679 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 14-238 |
| Cow position: | chr16:32837570-32837789 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 14-240 |
| Cow position: | chr16:50014504-50014286 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 90, 65 |
| Conread position: | 14-246 |
| Cow position: | chr16:17948207-17948434 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 14-247 |
| Cow position: | chr16:55586624-55586854 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 214, 125 |
| Conread position: | 14-256 |
| Cow position: | chr16:16402344-16402589 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 14-256 |
| Cow position: | chr16:25287712-25287952 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 14-258 |
| Cow position: | chr16:12169716-12169955 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 12 |
| Conread position: | 14-315 |
| Cow position: | chr16:19976951-19976642 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 15-240 |
| Cow position: | chr16:13969396-13969625 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 15-245 |
| Cow position: | chr16:38905255-38905477 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 90, 9 |
| Conread position: | 15-256 |
| Cow position: | chr16:10857649-10857886 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 15-262 |
| Cow position: | chr16:4987903-4987680 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 15-274 |
| Cow position: | chr16:17665612-17665355 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 127 |
| Conread position: | 15-274 |
| Cow position: | chr16:23564111-23563859 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 15-289 |
| Cow position: | chr16:52219056-52218793 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 242, 106 |
| Conread position: | 16-218 |
| Cow position: | chr16:49336203-49336003 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 16-251 |
| Cow position: | chr16:29510372-29510590 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 16-256 |
| Cow position: | chr16:31159598-31159835 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 66 |
| Conread position: | 16-287 |
| Cow position: | chr16:30209729-30209472 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 82, 66 |
| Conread position: | 17-181 |
| Cow position: | chr16:16524386-16524548 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 17-251 |
| Cow position: | chr16:17867501-17867732 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 159, 9 |
| Conread position: | 18-154 |
| Cow position: | chr16:52683371-52683233 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 19-250 |
| Cow position: | chr16:51399774-51400002 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 8, 81 |
| Conread position: | 19-251 |
| Cow position: | chr16:56613292-56613063 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 13, 61 |
| Conread position: | 20-256 |
| Cow position: | chr16:11102854-11103088 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 20-305 |
| Cow position: | chr16:4499405-4499129 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 135 |
| Conread position: | 21-178 |
| Cow position: | chr16:56905575-56905727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 32 |
| Conread position: | 21-197 |
| Cow position: | chr16:7785112-7784936 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-214 |
| Cow position: | chr16:43765274-43765086 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 21-236 |
| Cow position: | chr16:50189621-50189836 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 83 |
| Conread position: | 21-246 |
| Cow position: | chr16:53627459-53627675 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 21-247 |
| Cow position: | chr16:7426890-7427119 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 63, 129 |
| Conread position: | 21-256 |
| Cow position: | chr16:3918500-3918267 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 120 |
| Conread position: | 22-194 |
| Cow position: | chr16:18949579-18949402 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 24-229 |
| Cow position: | chr16:28816129-28816331 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 50 |
| Conread position: | 27-189 |
| Cow position: | chr16:40732180-40732023 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 28-251 |
| Cow position: | chr16:51880024-51880263 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 29-253 |
| Cow position: | chr16:21095527-21095745 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 127, 21 |
| Conread position: | 29-255 |
| Cow position: | chr16:18052057-18051829 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 154 |
| Conread position: | 31-304 |
| Cow position: | chr16:3752538-3752267 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 139, 182 |
| Conread position: | 35-254 |
| Cow position: | chr16:32384867-32385081 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 44 |
| Conread position: | 36-245 |
| Cow position: | chr16:47728976-47728772 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 119 |
| Conread position: | 58-253 |
| Cow position: | chr16:11449700-11449510 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 13, 98 |
| Conread position: | 58-304 |
| Cow position: | chr16:49171480-49171735 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 160, 83 |
Show alignments to all cow chromosomes.