Cow genome map
| Conread name: | rspl40_a19.y1 |
| Conread position: | 1-131 |
| Cow position: | chr17:5787805-5787934 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 1-205 |
| Cow position: | chr17:3270338-3270152 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-213 |
| Cow position: | chr17:34207790-34207998 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 102, 23 |
| Conread position: | 1-229 |
| Cow position: | chr17:3945170-3945394 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-256 |
| Cow position: | chr17:3042505-3042258 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 129 |
| Conread position: | 1-256 |
| Cow position: | chr17:44861767-44862016 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 1-273 |
| Cow position: | chr17:25707988-25707719 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 66 |
| Conread position: | 1-275 |
| Cow position: | chr17:7132419-7132694 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 1-289 |
| Cow position: | chr17:20216196-20215917 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 98 |
| Conread position: | 1-343 |
| Cow position: | chr17:144147-144487 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 11, 121 |
| Conread position: | 2-255 |
| Cow position: | chr17:12289385-12289635 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 3-229 |
| Cow position: | chr17:32950301-32950078 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 3-240 |
| Cow position: | chr17:27429604-27429373 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 3-251 |
| Cow position: | chr17:33271655-33271895 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 133 |
| Conread position: | 3-277 |
| Cow position: | chr17:16446411-16446671 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 204, 16 |
| Conread position: | 3-290 |
| Cow position: | chr17:42347199-42347477 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 255, 39 |
| Conread position: | 4-224 |
| Cow position: | chr17:28847640-28847858 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 212, 85 |
| Conread position: | 4-228 |
| Cow position: | chr17:37138786-37138578 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 4-229 |
| Cow position: | chr17:26881307-26881531 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 4-236 |
| Cow position: | chr17:21312785-21313006 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 4-240 |
| Cow position: | chr17:1035573-1035809 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 4-240 |
| Cow position: | chr17:20993013-20993244 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 89 |
| Conread position: | 4-247 |
| Cow position: | chr17:3466854-3466624 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 17, 66 |
| Conread position: | 4-252 |
| Cow position: | chr17:18246104-18245858 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 4-254 |
| Cow position: | chr17:1526327-1526572 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 14, 68 |
| Conread position: | 4-256 |
| Cow position: | chr17:11305058-11304815 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 4-256 |
| Cow position: | chr17:18860697-18860940 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 4-256 |
| Cow position: | chr17:24550201-24549951 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 4-256 |
| Cow position: | chr17:25181118-25181370 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 19 |
| Conread position: | 4-257 |
| Cow position: | chr17:26230978-26230718 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 4-270 |
| Cow position: | chr17:16371280-16371015 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 4-270 |
| Cow position: | chr17:26183252-26182987 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 4-270 |
| Cow position: | chr17:27795672-27795413 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 5-122 |
| Cow position: | chr17:20608572-20608452 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-153 |
| Cow position: | chr17:35212393-35212244 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 5-168 |
| Cow position: | chr17:7614356-7614515 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 5-198 |
| Cow position: | chr17:28359866-28359680 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 49 |
| Conread position: | 5-199 |
| Cow position: | chr17:37776143-37775957 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 130, 27 |
| Conread position: | 5-199 |
| Cow position: | chr17:37778595-37778781 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 130, 27 |
| Conread position: | 5-225 |
| Cow position: | chr17:36217156-36217373 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 116, 65 |
| Conread position: | 5-238 |
| Cow position: | chr17:42435619-42435833 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 195, 48 |
| Conread position: | 5-240 |
| Cow position: | chr17:36533394-36533169 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 5-256 |
| Cow position: | chr17:23879801-23880049 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 5-256 |
| Cow position: | chr17:25590210-25590457 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 13 |
| Conread position: | 5-256 |
| Cow position: | chr17:29292342-29292590 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 7, 22 |
| Conread position: | 5-256 |
| Cow position: | chr17:30204682-30204434 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 211, 150 |
| Conread position: | 5-257 |
| Cow position: | chr17:9293778-9293526 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 5-265 |
| Cow position: | chr17:20234253-20233998 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 78, 14 |
| Conread position: | 5-285 |
| Cow position: | chr17:8279682-8279961 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 151 |
| Conread position: | 6-240 |
| Cow position: | chr17:5997075-5997300 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 183, 25 |
| Conread position: | 6-256 |
| Cow position: | chr17:12929513-12929764 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 7-239 |
| Cow position: | chr17:34864595-34864366 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 95, 16 |
| Conread position: | 8-117 |
| Cow position: | chr17:27257207-27257318 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 8-192 |
| Cow position: | chr17:41811834-41811660 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 8-247 |
| Cow position: | chr17:25755815-25755572 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 8-250 |
| Cow position: | chr17:20592253-20592015 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 145 |
| Conread position: | 8-251 |
| Cow position: | chr17:27697680-27697908 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 8-255 |
| Cow position: | chr17:10424101-10423851 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 136, 46 |
| Conread position: | 8-255 |
| Cow position: | chr17:23246227-23245993 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 8-256 |
| Cow position: | chr17:23803480-23803247 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 8-268 |
| Cow position: | chr17:27819326-27819068 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 8-289 |
| Cow position: | chr17:2079784-2079508 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 72 |
| Conread position: | 8-306 |
| Cow position: | chr17:8861160-8861453 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 57 |
| Conread position: | 9-199 |
| Cow position: | chr17:21259926-21260115 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 17 |
| Conread position: | 9-213 |
| Cow position: | chr17:4436212-4436409 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 82, 15 |
| Conread position: | 9-217 |
| Cow position: | chr17:10271515-10271309 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 165 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 9-231 |
| Cow position: | chr17:11278009-11278228 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 163 |
| Conread position: | 9-250 |
| Cow position: | chr17:11215869-11216098 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 76 |
| Conread position: | 9-255 |
| Cow position: | chr17:37414873-37415120 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-256 |
| Cow position: | chr17:32027434-32027683 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 9-256 |
| Cow position: | chr17:34628458-34628702 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 147 |
| Conread position: | 9-262 |
| Cow position: | chr17:38614979-38614728 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 9-270 |
| Cow position: | chr17:32457546-32457815 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 157 |
| Conread position: | 9-274 |
| Cow position: | chr17:1410220-1410479 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 9-289 |
| Cow position: | chr17:33926104-33926374 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 10-130 |
| Cow position: | chr17:14683805-14683685 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-152 |
| Cow position: | chr17:26162406-26162547 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 10-201 |
| Cow position: | chr17:10510639-10510828 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 10-210 |
| Cow position: | chr17:10458918-10459111 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-247 |
| Cow position: | chr17:19237208-19236987 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 10-251 |
| Cow position: | chr17:21738855-21739100 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 10-256 |
| Cow position: | chr17:11618606-11618359 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 10-262 |
| Cow position: | chr17:11171812-11171570 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 10-262 |
| Cow position: | chr17:25145300-25145538 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 210, 69 |
| Conread position: | 11-235 |
| Cow position: | chr17:18824812-18824589 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 146 |
| Conread position: | 12-157 |
| Cow position: | chr17:21373696-21373555 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 12-229 |
| Cow position: | chr17:35311445-35311227 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 84, 70 |
| Conread position: | 12-251 |
| Cow position: | chr17:20780529-20780296 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-251 |
| Cow position: | chr17:39012743-39012502 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 12-255 |
| Cow position: | chr17:10308009-10308232 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 130 |
| Conread position: | 12-256 |
| Cow position: | chr17:21003810-21004052 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 93 |
| Conread position: | 12-256 |
| Cow position: | chr17:27048176-27047942 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 72 |
| Conread position: | 12-256 |
| Cow position: | chr17:30665292-30665053 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 12-287 |
| Cow position: | chr17:11101783-11102046 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 91, 13 |
| Conread position: | 12-290 |
| Cow position: | chr17:33999030-33999300 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 79 |
| Conread position: | 13-143 |
| Cow position: | chr17:25340133-25340266 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 53 |
| Conread position: | 13-213 |
| Cow position: | chr17:12108822-12108625 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 13-262 |
| Cow position: | chr17:16895287-16895522 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 245, 71 |
| Conread position: | 13-305 |
| Cow position: | chr17:13672052-13672350 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 13-306 |
| Cow position: | chr17:9697682-9697979 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 14-247 |
| Cow position: | chr17:25740970-25740738 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 148 |
| Conread position: | 14-247 |
| Cow position: | chr17:38276702-38276480 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-250 |
| Cow position: | chr17:22781708-22781477 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 14-251 |
| Cow position: | chr17:25097481-25097247 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 58 |
| Conread position: | 14-255 |
| Cow position: | chr17:24883551-24883784 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 14-256 |
| Cow position: | chr17:9565324-9565088 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 81, 47 |
| Conread position: | 14-256 |
| Cow position: | chr17:18494499-18494736 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 141 |
| Conread position: | 15-246 |
| Cow position: | chr17:9854003-9853775 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 16-198 |
| Cow position: | chr17:37342468-37342649 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 16-229 |
| Cow position: | chr17:21697753-21697538 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 33 |
| Conread position: | 16-252 |
| Cow position: | chr17:15450372-15450139 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 16-256 |
| Cow position: | chr17:26085051-26084814 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 141 |
| Conread position: | 16-257 |
| Cow position: | chr17:9117662-9117421 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 11, 78 |
| Conread position: | 16-289 |
| Cow position: | chr17:16307393-16307124 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 131 |
| Conread position: | 17-241 |
| Cow position: | chr17:41892052-41892277 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 203, 65 |
| Conread position: | 17-254 |
| Cow position: | chr17:5380983-5380747 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 18-246 |
| Cow position: | chr17:7890160-7890390 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 143 |
| Conread position: | 18-247 |
| Cow position: | chr17:19755888-19756112 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 172, 30 |
| Conread position: | 19-175 |
| Cow position: | chr17:1094504-1094660 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 19-229 |
| Cow position: | chr17:35991109-35990902 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 167, 134 |
| Conread position: | 19-247 |
| Cow position: | chr17:20652890-20653107 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 60 |
| Conread position: | 19-256 |
| Cow position: | chr17:10790327-10790091 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 19-261 |
| Cow position: | chr17:21620730-21620487 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 239, 0 |
| Conread position: | 20-256 |
| Cow position: | chr17:5041671-5041897 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 206, 62 |
| Conread position: | 20-256 |
| Cow position: | chr17:10634050-10634277 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 20-266 |
| Cow position: | chr17:31481026-31481277 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 20-286 |
| Cow position: | chr17:15363551-15363808 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 254, 111 |
| Conread position: | 21-210 |
| Cow position: | chr17:7595175-7594985 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 21-247 |
| Cow position: | chr17:30236217-30236016 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 21-256 |
| Cow position: | chr17:8926206-8926441 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-256 |
| Cow position: | chr17:19455302-19455524 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 23-251 |
| Cow position: | chr17:9778255-9778035 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 23-251 |
| Cow position: | chr17:25189295-25189064 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 212 |
| Conread position: | 24-282 |
| Cow position: | chr17:21017803-21017544 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 234, 55 |
| Conread position: | 25-251 |
| Cow position: | chr17:20126618-20126405 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 28-273 |
| Cow position: | chr17:20815375-20815136 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 50 |
| Conread position: | 28-274 |
| Cow position: | chr17:11837423-11837180 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 27 |
| Conread position: | 30-251 |
| Cow position: | chr17:17452604-17452818 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 30-268 |
| Cow position: | chr17:21419437-21419198 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 126 |
| Conread position: | 36-304 |
| Cow position: | chr17:36817936-36817676 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 37-251 |
| Cow position: | chr17:10220469-10220265 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 39-256 |
| Cow position: | chr17:16463113-16463335 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 30, 161 |
| Conread position: | 44-247 |
| Cow position: | chr17:1327984-1328182 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 54-161 |
| Cow position: | chr17:7861863-7861971 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.