Cow genome map
Conread name: | rspl40_a19.y1 |
Conread position: | 1-185 |
Cow position: | chr19:15936814-15936635 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 145 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 5, 23 |
Conread position: | 1-234 |
Cow position: | chr19:36976934-36977167 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 161 |
Conread position: | 1-237 |
Cow position: | chr19:6880897-6881132 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 169, 122 |
Conread position: | 1-246 |
Cow position: | chr19:2342460-2342213 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 1-246 |
Cow position: | chr19:7029894-7029655 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 101, 50 |
Conread position: | 1-247 |
Cow position: | chr19:25637517-25637763 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 80 |
Conread position: | 1-251 |
Cow position: | chr19:33281335-33281103 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 5, 51 |
Conread position: | 1-256 |
Cow position: | chr19:19673393-19673146 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 156 |
Conread position: | 1-289 |
Cow position: | chr19:9703859-9704137 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 221 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 98 |
Conread position: | 2-277 |
Cow position: | chr19:31827074-31826817 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 4-244 |
Cow position: | chr19:18242452-18242682 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 13, 96 |
Conread position: | 4-247 |
Cow position: | chr19:19924626-19924860 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 4-251 |
Cow position: | chr19:42694968-42694720 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 182 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 14, 97 |
Conread position: | 4-254 |
Cow position: | chr19:31595273-31595028 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 181 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 77, 21 |
Conread position: | 4-262 |
Cow position: | chr19:7637263-7637516 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 79 |
Conread position: | 4-314 |
Cow position: | chr19:34166343-34166010 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 223 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 85, 281 |
Conread position: | 5-154 |
Cow position: | chr19:1402834-1402982 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 125 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 13, 36 |
Conread position: | 5-251 |
Cow position: | chr19:53738309-53738067 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 0 |
Conread position: | 5-256 |
Cow position: | chr19:9387609-9387361 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 0 |
Conread position: | 5-264 |
Cow position: | chr19:19662019-19661760 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 94 |
Conread position: | 5-297 |
Cow position: | chr19:36461557-36461843 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 62 |
Conread position: | 5-318 |
Cow position: | chr19:33306282-33305972 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 252, 0 |
Conread position: | 6-256 |
Cow position: | chr19:15887352-15887595 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 6-270 |
Cow position: | chr19:30746377-30746115 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 177, 150 |
Conread position: | 7-255 |
Cow position: | chr19:6516237-6515989 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 185 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 69, 25 |
Conread position: | 8-189 |
Cow position: | chr19:31614080-31613905 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 146 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 9, 23 |
Conread position: | 8-201 |
Cow position: | chr19:27346680-27346857 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 148 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 8-239 |
Cow position: | chr19:31381023-31381252 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 52 |
Conread position: | 8-248 |
Cow position: | chr19:48478950-48478704 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 8-250 |
Cow position: | chr19:16694069-16694314 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 9, 96 |
Conread position: | 8-262 |
Cow position: | chr19:4252003-4252252 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 180 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 250, 17 |
Conread position: | 9-154 |
Cow position: | chr19:25271446-25271591 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-217 |
Cow position: | chr19:39986574-39986776 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 160 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 12, 145 |
Conread position: | 9-246 |
Cow position: | chr19:47671721-47671489 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 64 |
Conread position: | 9-251 |
Cow position: | chr19:2260163-2260393 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 188 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 56, 16 |
Conread position: | 9-251 |
Cow position: | chr19:2771043-2771275 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 0 |
Conread position: | 9-251 |
Cow position: | chr19:14928686-14928938 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 175 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 74, 84 |
Conread position: | 9-255 |
Cow position: | chr19:33912657-33912905 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 174 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 74, 95 |
Conread position: | 9-256 |
Cow position: | chr19:729775-730003 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 9-256 |
Cow position: | chr19:29627409-29627647 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 176 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 18, 77 |
Conread position: | 9-271 |
Cow position: | chr19:10171973-10171711 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 184 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 20, 96 |
Conread position: | 9-275 |
Cow position: | chr19:37562036-37562284 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 183 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 10, 62 |
Conread position: | 10-142 |
Cow position: | chr19:56126226-56126095 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 10-216 |
Cow position: | chr19:1713174-1713376 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 166 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 8, 35 |
Conread position: | 10-262 |
Cow position: | chr19:55236458-55236213 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 45 |
Conread position: | 10-278 |
Cow position: | chr19:36478864-36478602 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 197 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 16, 57 |
Conread position: | 11-232 |
Cow position: | chr19:30052039-30052249 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 16, 125 |
Conread position: | 12-247 |
Cow position: | chr19:56018556-56018787 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 182 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 13, 61 |
Conread position: | 12-255 |
Cow position: | chr19:6688031-6688277 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 175 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 12-260 |
Cow position: | chr19:44490062-44489815 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 179, 0 |
Conread position: | 13-203 |
Cow position: | chr19:24137228-24137038 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 12, 70 |
Conread position: | 13-229 |
Cow position: | chr19:43035208-43034996 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 148 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 86, 66 |
Conread position: | 13-247 |
Cow position: | chr19:35782166-35782396 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 13-274 |
Cow position: | chr19:2734416-2734158 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 183 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 214, 69 |
Conread position: | 13-288 |
Cow position: | chr19:30436197-30435918 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 198 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 58, 12 |
Conread position: | 13-349 |
Cow position: | chr19:33882206-33882516 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 232 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 14-130 |
Cow position: | chr19:42273882-42273998 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 90 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-199 |
Cow position: | chr19:56156219-56156037 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 141 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 14-210 |
Cow position: | chr19:47479654-47479852 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 157 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 93, 50 |
Conread position: | 14-240 |
Cow position: | chr19:22863696-22863919 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 22 |
Conread position: | 14-251 |
Cow position: | chr19:41212085-41212320 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 144 |
Conread position: | 14-256 |
Cow position: | chr19:35540262-35540031 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 170 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 106 |
Conread position: | 14-288 |
Cow position: | chr19:35064225-35064490 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 205 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 40, 126 |
Conread position: | 15-175 |
Cow position: | chr19:22168481-22168322 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 15-240 |
Cow position: | chr19:51185387-51185169 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 157 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 214, 10 |
Conread position: | 15-244 |
Cow position: | chr19:2138141-2138366 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 68, 89 |
Conread position: | 15-251 |
Cow position: | chr19:1901033-1901269 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 158 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 19, 56 |
Conread position: | 15-251 |
Cow position: | chr19:21285110-21285353 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 15-275 |
Cow position: | chr19:48722992-48722734 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 187 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 68, 9 |
Conread position: | 16-148 |
Cow position: | chr19:33260993-33260859 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 59, 34 |
Conread position: | 16-153 |
Cow position: | chr19:51536530-51536393 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 17-139 |
Cow position: | chr19:5279830-5279705 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 107 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 18-256 |
Cow position: | chr19:20661451-20661690 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 170 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 45, 65 |
Conread position: | 19-177 |
Cow position: | chr19:15796629-15796474 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 134 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 11, 34 |
Conread position: | 19-255 |
Cow position: | chr19:39876560-39876788 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 179 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 11, 37 |
Conread position: | 20-247 |
Cow position: | chr19:25711358-25711594 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 20-256 |
Cow position: | chr19:33932190-33932414 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 20-264 |
Cow position: | chr19:471994-471741 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 188 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 5, 76 |
Conread position: | 21-247 |
Cow position: | chr19:43517190-43516972 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 22-256 |
Cow position: | chr19:39751435-39751208 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 172 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 22-268 |
Cow position: | chr19:36380200-36379964 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 179 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 24-159 |
Cow position: | chr19:22668188-22668054 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 24-246 |
Cow position: | chr19:32989445-32989654 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 164 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 148, 41 |
Conread position: | 24-256 |
Cow position: | chr19:31395939-31396163 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 170 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 25-262 |
Cow position: | chr19:48409464-48409238 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 162 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 232, 57 |
Conread position: | 28-274 |
Cow position: | chr19:18788153-18788395 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 127 |
Conread position: | 74-203 |
Cow position: | chr19:11147614-11147742 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 106, 0 |
Show alignments to all cow chromosomes.