Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-163
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 71

Conread position: 1-251
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 221

Conread position: 1-268
Cow position:
Alignm length: 270
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 56

Conread position: 1-275
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 23

Conread position: 1-289
Cow position:
Alignm length: 294
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 98

Conread position: 1-292
Cow position:
Alignm length: 298
Alignm identity: 215
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 5, 146

Conread position: 2-273
Cow position:
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 0

Conread position: 3-230
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 21

Conread position: 3-256
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 81

Conread position: 3-256
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 16

Conread position: 4-151
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 4-180
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 89, 18

Conread position: 4-187
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 117, 44

Conread position: 4-207
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 15, 81

Conread position: 4-236
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 4-247
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 0

Conread position: 4-254
Cow position:
Alignm length: 252
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 81

Conread position: 4-255
Cow position:
Alignm length: 253
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 16, 211

Conread position: 4-274
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 236, 19

Conread position: 4-275
Cow position:
Alignm length: 275
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 220, 75

Conread position: 4-279
Cow position:
Alignm length: 277
Alignm identity: 192
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 17, 83

Conread position: 5-106
Cow position:
Alignm length: 103
Alignm identity: 85
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 5-161
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 5-172
Cow position:
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 157, 115

Conread position: 5-178
Cow position:
Alignm length: 178
Alignm identity: 140
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 49

Conread position: 5-239
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 67

Conread position: 5-245
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 94, 8

Conread position: 5-248
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 14

Conread position: 5-255
Cow position:
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 5-264
Cow position:
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 56

Conread position: 5-277
Cow position:
Alignm length: 274
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 5-289
Cow position:
Alignm length: 293
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 146

Conread position: 6-246
Cow position:
Alignm length: 249
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 134

Conread position: 6-256
Cow position:
Alignm length: 253
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 140

Conread position: 7-136
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 73

Conread position: 7-255
Cow position:
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 8-118
Cow position:
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 64

Conread position: 8-217
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 10, 84

Conread position: 8-251
Cow position:
Alignm length: 244
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 8-251
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 8-252
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 99

Conread position: 9-196
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 142, 15

Conread position: 9-247
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 74

Conread position: 9-250
Cow position:
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 46

Conread position: 9-251
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 74, 84

Conread position: 9-256
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 14

Conread position: 9-258
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 211

Conread position: 9-264
Cow position:
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 75

Conread position: 10-158
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 10-229
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 44

Conread position: 10-251
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 95

Conread position: 10-251
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 10-255
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 41

Conread position: 10-256
Cow position:
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 123

Conread position: 10-275
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 83

Conread position: 11-143
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 11-235
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 126

Conread position: 11-240
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 11-256
Cow position:
Alignm length: 247
Alignm identity: 161
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 145

Conread position: 11-265
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 21

Conread position: 12-241
Cow position:
Alignm length: 232
Alignm identity: 155
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 70

Conread position: 13-210
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 13-218
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 93, 53

Conread position: 13-246
Cow position:
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 13-251
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 70

Conread position: 13-256
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 13, 92

Conread position: 13-275
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 0

Conread position: 14-179
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 14-180
Cow position:
Alignm length: 167
Alignm identity: 134
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 127, 0

Conread position: 14-218
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 65

Conread position: 14-262
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 233, 40

Conread position: 14-275
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 243, 139

Conread position: 14-305
Cow position:
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 17

Conread position: 15-275
Cow position:
Alignm length: 262
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 14

Conread position: 16-250
Cow position:
Alignm length: 240
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 80

Conread position: 16-256
Cow position:
Alignm length: 241
Alignm identity: 161
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 16-256
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 32, 0

Conread position: 16-258
Cow position:
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 130

Conread position: 17-249
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 66

Conread position: 17-287
Cow position:
Alignm length: 273
Alignm identity: 183
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 53

Conread position: 17-353
Cow position:
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 18-144
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 122

Conread position: 18-240
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 191, 64

Conread position: 18-247
Cow position:
Alignm length: 231
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 204, 64

Conread position: 18-256
Cow position:
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 13

Conread position: 18-256
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 107

Conread position: 19-251
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 19-251
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 84

Conread position: 19-256
Cow position:
Alignm length: 239
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 205

Conread position: 20-247
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 20-256
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 22-212
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 121

Conread position: 23-253
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 24-240
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 42

Conread position: 25-256
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 58, 78

Conread position: 38-207
Cow position:
Alignm length: 171
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 17

Conread position: 62-256
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 74-255
Cow position:
Alignm length: 183
Alignm identity: 148
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 96, 153

Show alignments to all cow chromosomes.