Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-106
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 79

Conread position: 1-251
Cow position:
Alignm length: 252
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 240, 86

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 186
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 86

Conread position: 1-271
Cow position:
Alignm length: 277
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 106

Conread position: 1-282
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 5, 46

Conread position: 1-289
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 187

Conread position: 1-319
Cow position:
Alignm length: 323
Alignm identity: 223
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 72

Conread position: 2-182
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 2-275
Cow position:
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 3-256
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 28, 0

Conread position: 4-190
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 4-196
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 79

Conread position: 4-203
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 174, 21

Conread position: 4-210
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 62, 0

Conread position: 4-240
Cow position:
Alignm length: 240
Alignm identity: 163
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 97

Conread position: 4-247
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 4-247
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 4-251
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 92

Conread position: 4-254
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 20, 0

Conread position: 4-255
Cow position:
Alignm length: 252
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 4-262
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 77, 15

Conread position: 4-262
Cow position:
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 254, 71

Conread position: 4-264
Cow position:
Alignm length: 265
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 135

Conread position: 4-267
Cow position:
Alignm length: 272
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 13, 148

Conread position: 4-273
Cow position:
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 4-274
Cow position:
Alignm length: 273
Alignm identity: 199
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 28, 62

Conread position: 4-280
Cow position:
Alignm length: 283
Alignm identity: 199
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 59, 100

Conread position: 4-301
Cow position:
Alignm length: 300
Alignm identity: 214
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 120, 57

Conread position: 4-309
Cow position:
Alignm length: 322
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 127, 50

Conread position: 5-178
Cow position:
Alignm length: 176
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 130, 105

Conread position: 5-226
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 0

Conread position: 5-235
Cow position:
Alignm length: 232
Alignm identity: 175
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 14, 82

Conread position: 5-247
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 5-251
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 12, 77

Conread position: 5-256
Cow position:
Alignm length: 257
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 35

Conread position: 5-256
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 20

Conread position: 5-256
Cow position:
Alignm length: 253
Alignm identity: 185
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 13, 82

Conread position: 5-304
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 40

Conread position: 5-307
Cow position:
Alignm length: 306
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 259, 51

Conread position: 6-256
Cow position:
Alignm length: 257
Alignm identity: 185
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 21, 131

Conread position: 7-241
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 70, 17

Conread position: 7-254
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 7-273
Cow position:
Alignm length: 271
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 8-121
Cow position:
Alignm length: 114
Alignm identity: 94
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 8-180
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 67

Conread position: 8-255
Cow position:
Alignm length: 249
Alignm identity: 167
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 17

Conread position: 8-256
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 16, 57

Conread position: 8-256
Cow position:
Alignm length: 250
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 28

Conread position: 8-268
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 14, 236

Conread position: 9-152
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 102

Conread position: 9-228
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 128

Conread position: 9-251
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 61

Conread position: 9-254
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 62

Conread position: 9-254
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 27

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 84

Conread position: 9-256
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 9-256
Cow position:
Alignm length: 250
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 143, 10

Conread position: 9-262
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 244, 41

Conread position: 9-274
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 83

Conread position: 9-275
Cow position:
Alignm length: 268
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 90, 73

Conread position: 9-289
Cow position:
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 147

Conread position: 9-303
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 74

Conread position: 10-188
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 89

Conread position: 10-251
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 122

Conread position: 10-254
Cow position:
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 102

Conread position: 10-256
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 12, 142

Conread position: 10-256
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 12, 188

Conread position: 10-256
Cow position:
Alignm length: 248
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 5, 73

Conread position: 10-256
Cow position:
Alignm length: 249
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 73

Conread position: 11-185
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 11, 44

Conread position: 11-255
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 60

Conread position: 11-256
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 93, 0

Conread position: 11-256
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 62

Conread position: 12-235
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 81

Conread position: 12-239
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 13

Conread position: 12-250
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 71, 11

Conread position: 12-251
Cow position:
Alignm length: 241
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 75

Conread position: 12-251
Cow position:
Alignm length: 242
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 70

Conread position: 12-256
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 92, 70

Conread position: 12-268
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 79, 67

Conread position: 12-274
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 74

Conread position: 13-153
Cow position:
Alignm length: 143
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 13-240
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 90, 44

Conread position: 13-254
Cow position:
Alignm length: 243
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 0

Conread position: 14-178
Cow position:
Alignm length: 165
Alignm identity: 136
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 14-251
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 57

Conread position: 14-256
Cow position:
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 147

Conread position: 15-200
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 15, 144

Conread position: 16-226
Cow position:
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 88

Conread position: 17-251
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 66, 7

Conread position: 17-256
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 72

Conread position: 19-251
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 0

Conread position: 19-256
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 72, 60

Conread position: 20-193
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 56

Conread position: 20-203
Cow position:
Alignm length: 184
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 20-239
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 20-251
Cow position:
Alignm length: 232
Alignm identity: 169
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 136, 0

Conread position: 21-130
Cow position:
Alignm length: 111
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 9

Conread position: 21-256
Cow position:
Alignm length: 238
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 113

Conread position: 22-247
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 25-254
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 145

Conread position: 25-257
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 79

Conread position: 26-256
Cow position:
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 28-130
Cow position:
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 34-189
Cow position:
Alignm length: 157
Alignm identity: 127
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 34

Conread position: 35-275
Cow position:
Alignm length: 244
Alignm identity: 170
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 47

Conread position: 36-251
Cow position:
Alignm length: 220
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 121

Show alignments to all cow chromosomes.