Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-216
Cow position: chr23:32662570-32662355 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 102

Conread position: 1-256
Cow position: chr23:7751174-7750929 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 83

Conread position: 1-273
Cow position: chr23:29272105-29271841 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 5, 19

Conread position: 1-274
Cow position: chr23:22660594-22660847 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 103, 48

Conread position: 2-197
Cow position: chr23:30773690-30773881 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 24

Conread position: 3-256
Cow position: chr23:1923849-1924093 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 0

Conread position: 4-209
Cow position: chr23:28894969-28895181 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 4-210
Cow position: chr23:23470923-23470729 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 4-229
Cow position: chr23:614915-615143 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 77, 199

Conread position: 4-237
Cow position: chr23:36075831-36076062 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 79

Conread position: 4-247
Cow position: chr23:17000697-17000450 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 213

Conread position: 4-250
Cow position: chr23:7221025-7221268 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 100, 46

Conread position: 4-255
Cow position: chr23:41589929-41590168 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 4-256
Cow position: chr23:344187-344438 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 99, 78

Conread position: 4-256
Cow position: chr23:10014526-10014285 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 4-256
Cow position: chr23:38455193-38455445 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 91

Conread position: 4-262
Cow position: chr23:16237263-16237527 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 247

Conread position: 4-300
Cow position: chr23:645314-645030 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 72, 78

Conread position: 5-131
Cow position: chr23:496389-496516 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 5-226
Cow position: chr23:21659931-21659707 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 5-229
Cow position: chr23:25407462-25407685 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 5-240
Cow position: chr23:40862331-40862095 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 5-255
Cow position: chr23:17092511-17092747 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 50

Conread position: 5-256
Cow position: chr23:31607165-31607420 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 27

Conread position: 5-257
Cow position: chr23:20171564-20171317 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 12, 116

Conread position: 5-268
Cow position: chr23:37224081-37224339 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 74

Conread position: 5-277
Cow position: chr23:11434272-11434537 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 55

Conread position: 5-304
Cow position: chr23:20781807-20781511 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 64

Conread position: 6-256
Cow position: chr23:10853037-10852792 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 77, 100

Conread position: 7-254
Cow position: chr23:31654416-31654183 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 7-256
Cow position: chr23:16058577-16058339 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 7-256
Cow position: chr23:18492151-18491908 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 184
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 96, 47

Conread position: 8-154
Cow position: chr23:6031857-6031718 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 142, 42

Conread position: 8-218
Cow position: chr23:2531363-2531562 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 9-246
Cow position: chr23:29626397-29626164 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 82, 70

Conread position: 9-251
Cow position: chr23:19636277-19636518 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 96

Conread position: 9-252
Cow position: chr23:38854754-38854990 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 73, 0

Conread position: 9-315
Cow position: chr23:29034299-29033995 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 70

Conread position: 10-253
Cow position: chr23:26067093-26066863 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 58

Conread position: 10-256
Cow position: chr23:1605657-1605419 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 13

Conread position: 10-256
Cow position: chr23:20585716-20585972 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 8, 167

Conread position: 11-211
Cow position: chr23:5723526-5723328 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 65

Conread position: 12-227
Cow position: chr23:30307886-30307677 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 124, 19

Conread position: 12-240
Cow position: chr23:13599324-13599098 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 79, 70

Conread position: 12-250
Cow position: chr23:9594851-9595083 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 67

Conread position: 12-250
Cow position: chr23:16582928-16583163 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 136

Conread position: 12-256
Cow position: chr23:37190606-37190838 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 208, 35

Conread position: 13-247
Cow position: chr23:1991450-1991678 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 87

Conread position: 14-208
Cow position: chr23:18296786-18296595 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 90

Conread position: 15-272
Cow position: chr23:36146482-36146730 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 42

Conread position: 15-289
Cow position: chr23:809145-808870 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 19, 79

Conread position: 16-153
Cow position: chr23:40651488-40651623 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 69

Conread position: 16-247
Cow position: chr23:9734390-9734168 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 77

Conread position: 18-131
Cow position: chr23:38058373-38058485 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 18-240
Cow position: chr23:7321830-7322041 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 19-211
Cow position: chr23:32148363-32148551 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 142, 21

Conread position: 19-243
Cow position: chr23:13359782-13359573 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 203, 21

Conread position: 19-251
Cow position: chr23:9711609-9711844 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 190

Conread position: 19-262
Cow position: chr23:9641446-9641686 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 209, 68

Conread position: 19-274
Cow position: chr23:3727421-3727680 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 6, 89

Conread position: 20-200
Cow position: chr23:35177289-35177113 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 176, 62

Conread position: 20-255
Cow position: chr23:18322444-18322678 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 83, 59

Conread position: 20-256
Cow position: chr23:20752985-20752753 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 21-236
Cow position: chr23:1203741-1203963 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 92

Conread position: 23-268
Cow position: chr23:11404286-11404531 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 218

Conread position: 25-255
Cow position: chr23:5162394-5162169 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 79

Conread position: 26-238
Cow position: chr23:31897693-31897491 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 71

Conread position: 26-256
Cow position: chr23:40778232-40778003 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 83, 53

Conread position: 27-256
Cow position: chr23:22804690-22804462 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 56, 115

Conread position: 28-256
Cow position: chr23:360952-361169 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 163, 54

Conread position: 28-268
Cow position: chr23:22588301-22588541 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 125

Conread position: 31-285
Cow position: chr23:38248854-38248612 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 32-277
Cow position: chr23:15710113-15710358 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 129

Conread position: 32-280
Cow position: chr23:11380293-11380540 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 50

Conread position: 32-289
Cow position: chr23:4562845-4562593 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 51, 61

Conread position: 34-255
Cow position: chr23:4810711-4810491 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 71

Conread position: 41-286
Cow position: chr23:3140814-3140573 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 206, 41

Conread position: 44-247
Cow position: chr23:29330050-29329846 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 38, 49

Conread position: 60-240
Cow position: chr23:41348713-41348892 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 22

Show alignments to all cow chromosomes.