Cow genome map
Conread name: | rspl40_a19.y1 |
Conread position: | 1-216 |
Cow position: | chr23:32662570-32662355 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 174 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 102 |
Conread position: | 1-256 |
Cow position: | chr23:7751174-7750929 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 175 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 20, 83 |
Conread position: | 1-273 |
Cow position: | chr23:29272105-29271841 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 198 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 5, 19 |
Conread position: | 1-274 |
Cow position: | chr23:22660594-22660847 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 204 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 103, 48 |
Conread position: | 2-197 |
Cow position: | chr23:30773690-30773881 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 163 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 24 |
Conread position: | 3-256 |
Cow position: | chr23:1923849-1924093 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 180 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 4-209 |
Cow position: | chr23:28894969-28895181 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 4-210 |
Cow position: | chr23:23470923-23470729 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 4-229 |
Cow position: | chr23:614915-615143 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 77, 199 |
Conread position: | 4-237 |
Cow position: | chr23:36075831-36076062 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 157 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 18, 79 |
Conread position: | 4-247 |
Cow position: | chr23:17000697-17000450 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 173 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 21, 213 |
Conread position: | 4-250 |
Cow position: | chr23:7221025-7221268 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 176 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 100, 46 |
Conread position: | 4-255 |
Cow position: | chr23:41589929-41590168 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 4-256 |
Cow position: | chr23:344187-344438 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 184 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 99, 78 |
Conread position: | 4-256 |
Cow position: | chr23:10014526-10014285 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 174 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 4-256 |
Cow position: | chr23:38455193-38455445 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 177 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 23, 91 |
Conread position: | 4-262 |
Cow position: | chr23:16237263-16237527 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 247 |
Conread position: | 4-300 |
Cow position: | chr23:645314-645030 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 72, 78 |
Conread position: | 5-131 |
Cow position: | chr23:496389-496516 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 5-226 |
Cow position: | chr23:21659931-21659707 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 165 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 5-229 |
Cow position: | chr23:25407462-25407685 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 176 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 5-240 |
Cow position: | chr23:40862331-40862095 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 5-255 |
Cow position: | chr23:17092511-17092747 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 194 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 20, 50 |
Conread position: | 5-256 |
Cow position: | chr23:31607165-31607420 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 27 |
Conread position: | 5-257 |
Cow position: | chr23:20171564-20171317 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 174 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 12, 116 |
Conread position: | 5-268 |
Cow position: | chr23:37224081-37224339 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 253, 74 |
Conread position: | 5-277 |
Cow position: | chr23:11434272-11434537 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 18, 55 |
Conread position: | 5-304 |
Cow position: | chr23:20781807-20781511 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 16, 64 |
Conread position: | 6-256 |
Cow position: | chr23:10853037-10852792 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 181 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 77, 100 |
Conread position: | 7-254 |
Cow position: | chr23:31654416-31654183 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 168 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 79, 0 |
Conread position: | 7-256 |
Cow position: | chr23:16058577-16058339 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 7-256 |
Cow position: | chr23:18492151-18491908 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 184 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 96, 47 |
Conread position: | 8-154 |
Cow position: | chr23:6031857-6031718 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 142, 42 |
Conread position: | 8-218 |
Cow position: | chr23:2531363-2531562 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 151 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 9-246 |
Cow position: | chr23:29626397-29626164 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 82, 70 |
Conread position: | 9-251 |
Cow position: | chr23:19636277-19636518 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 96 |
Conread position: | 9-252 |
Cow position: | chr23:38854754-38854990 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 173 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 9-315 |
Cow position: | chr23:29034299-29033995 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 212 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 79, 70 |
Conread position: | 10-253 |
Cow position: | chr23:26067093-26066863 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 184 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 19, 58 |
Conread position: | 10-256 |
Cow position: | chr23:1605657-1605419 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 168 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 93, 13 |
Conread position: | 10-256 |
Cow position: | chr23:20585716-20585972 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 195 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 8, 167 |
Conread position: | 11-211 |
Cow position: | chr23:5723526-5723328 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 142 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 12, 65 |
Conread position: | 12-227 |
Cow position: | chr23:30307886-30307677 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 158 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 124, 19 |
Conread position: | 12-240 |
Cow position: | chr23:13599324-13599098 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 79, 70 |
Conread position: | 12-250 |
Cow position: | chr23:9594851-9595083 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 169 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 91, 67 |
Conread position: | 12-250 |
Cow position: | chr23:16582928-16583163 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 171 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 14, 136 |
Conread position: | 12-256 |
Cow position: | chr23:37190606-37190838 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 188 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 208, 35 |
Conread position: | 13-247 |
Cow position: | chr23:1991450-1991678 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 168 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 73, 87 |
Conread position: | 14-208 |
Cow position: | chr23:18296786-18296595 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 141 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 69, 90 |
Conread position: | 15-272 |
Cow position: | chr23:36146482-36146730 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 42 |
Conread position: | 15-289 |
Cow position: | chr23:809145-808870 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 187 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 19, 79 |
Conread position: | 16-153 |
Cow position: | chr23:40651488-40651623 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 59, 69 |
Conread position: | 16-247 |
Cow position: | chr23:9734390-9734168 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 163 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 67, 77 |
Conread position: | 18-131 |
Cow position: | chr23:38058373-38058485 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 91 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 18-240 |
Cow position: | chr23:7321830-7322041 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 162 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 19-211 |
Cow position: | chr23:32148363-32148551 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 142, 21 |
Conread position: | 19-243 |
Cow position: | chr23:13359782-13359573 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 163 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 203, 21 |
Conread position: | 19-251 |
Cow position: | chr23:9711609-9711844 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 190 |
Conread position: | 19-262 |
Cow position: | chr23:9641446-9641686 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 181 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 209, 68 |
Conread position: | 19-274 |
Cow position: | chr23:3727421-3727680 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 186 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 6, 89 |
Conread position: | 20-200 |
Cow position: | chr23:35177289-35177113 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 176, 62 |
Conread position: | 20-255 |
Cow position: | chr23:18322444-18322678 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 167 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 83, 59 |
Conread position: | 20-256 |
Cow position: | chr23:20752985-20752753 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 21-236 |
Cow position: | chr23:1203741-1203963 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 21, 92 |
Conread position: | 23-268 |
Cow position: | chr23:11404286-11404531 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 218 |
Conread position: | 25-255 |
Cow position: | chr23:5162394-5162169 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 168 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 58, 79 |
Conread position: | 26-238 |
Cow position: | chr23:31897693-31897491 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 25, 71 |
Conread position: | 26-256 |
Cow position: | chr23:40778232-40778003 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 168 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 83, 53 |
Conread position: | 27-256 |
Cow position: | chr23:22804690-22804462 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 56, 115 |
Conread position: | 28-256 |
Cow position: | chr23:360952-361169 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 159 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 163, 54 |
Conread position: | 28-268 |
Cow position: | chr23:22588301-22588541 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 125 |
Conread position: | 31-285 |
Cow position: | chr23:38248854-38248612 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 179 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 32-277 |
Cow position: | chr23:15710113-15710358 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 172 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 51, 129 |
Conread position: | 32-280 |
Cow position: | chr23:11380293-11380540 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 169 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 75, 50 |
Conread position: | 32-289 |
Cow position: | chr23:4562845-4562593 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 180 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 51, 61 |
Conread position: | 34-255 |
Cow position: | chr23:4810711-4810491 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 158 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 51, 71 |
Conread position: | 41-286 |
Cow position: | chr23:3140814-3140573 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 177 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 206, 41 |
Conread position: | 44-247 |
Cow position: | chr23:29330050-29329846 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 143 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 38, 49 |
Conread position: | 60-240 |
Cow position: | chr23:41348713-41348892 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 39, 22 |
Show alignments to all cow chromosomes.