Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-132
Cow position: chr24:36713719-36713586 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 31

Conread position: 1-241
Cow position: chr24:40091613-40091842 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 1-255
Cow position: chr24:44041045-44041295 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 105

Conread position: 1-280
Cow position: chr24:39681819-39681544 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 4-141
Cow position: chr24:10837708-10837571 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-149
Cow position: chr24:36801339-36801202 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 4-218
Cow position: chr24:6061437-6061647 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 4-230
Cow position: chr24:27040008-27039778 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 78

Conread position: 4-243
Cow position: chr24:37204917-37205152 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 4-252
Cow position: chr24:43364320-43364081 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 48

Conread position: 4-256
Cow position: chr24:3631469-3631231 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 4-256
Cow position: chr24:27052535-27052778 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 19

Conread position: 4-272
Cow position: chr24:30483990-30484245 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 254, 21

Conread position: 4-273
Cow position: chr24:19769448-19769195 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 258, 21

Conread position: 5-128
Cow position: chr24:26455801-26455677 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 5-142
Cow position: chr24:40855153-40855015 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 5-144
Cow position: chr24:19611970-19611832 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 5-181
Cow position: chr24:18786958-18787130 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 151

Conread position: 5-243
Cow position: chr24:39259119-39258891 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 5-246
Cow position: chr24:42580883-42581107 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 47

Conread position: 5-256
Cow position: chr24:43733932-43733683 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 5-259
Cow position: chr24:14746593-14746347 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 20

Conread position: 5-269
Cow position: chr24:7079751-7079491 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 63

Conread position: 6-284
Cow position: chr24:37386394-37386656 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 251, 19

Conread position: 7-161
Cow position: chr24:30940478-30940637 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 7-255
Cow position: chr24:24311463-24311216 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 8-160
Cow position: chr24:31258379-31258534 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 148

Conread position: 8-233
Cow position: chr24:2970649-2970870 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 71

Conread position: 8-240
Cow position: chr24:12993014-12992785 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 80

Conread position: 8-241
Cow position: chr24:32158317-32158541 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 90

Conread position: 8-256
Cow position: chr24:27683489-27683728 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 17

Conread position: 8-256
Cow position: chr24:38267147-38266907 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 60, 122

Conread position: 8-275
Cow position: chr24:17412697-17412431 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 175

Conread position: 8-286
Cow position: chr24:23685112-23685377 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 64

Conread position: 9-220
Cow position: chr24:27054365-27054150 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 63

Conread position: 9-251
Cow position: chr24:1438317-1438548 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 206, 78

Conread position: 9-253
Cow position: chr24:27633364-27633130 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 66

Conread position: 9-256
Cow position: chr24:33153731-33153496 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 14

Conread position: 9-257
Cow position: chr24:27341066-27341311 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 9-264
Cow position: chr24:39350261-39350501 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 63

Conread position: 9-267
Cow position: chr24:16556683-16556935 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 70

Conread position: 9-290
Cow position: chr24:31816532-31816262 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 9

Conread position: 10-228
Cow position: chr24:28349536-28349327 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 81

Conread position: 10-248
Cow position: chr24:30860592-30860359 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 10-253
Cow position: chr24:14617610-14617373 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 212, 145

Conread position: 10-255
Cow position: chr24:35569140-35568904 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 85

Conread position: 10-319
Cow position: chr24:18975157-18974857 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 145

Conread position: 11-218
Cow position: chr24:23824469-23824665 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 81

Conread position: 11-251
Cow position: chr24:35836290-35836519 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 11-261
Cow position: chr24:21860268-21860511 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 93

Conread position: 11-270
Cow position: chr24:1271922-1272169 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 26

Conread position: 11-275
Cow position: chr24:40130082-40129819 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 149

Conread position: 12-247
Cow position: chr24:7913956-7913721 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 19

Conread position: 12-256
Cow position: chr24:39123816-39123583 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 12-256
Cow position: chr24:43432746-43432516 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 81

Conread position: 12-262
Cow position: chr24:29679356-29679605 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 216, 59

Conread position: 12-265
Cow position: chr24:20862004-20862250 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 99

Conread position: 12-272
Cow position: chr24:28721844-28721587 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 81

Conread position: 12-273
Cow position: chr24:33944357-33944102 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 71

Conread position: 13-247
Cow position: chr24:18243515-18243742 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 73

Conread position: 14-247
Cow position: chr24:31378707-31378477 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 14-256
Cow position: chr24:6342134-6341883 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 14-256
Cow position: chr24:35074044-35073806 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 68

Conread position: 14-270
Cow position: chr24:28553601-28553846 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 244, 66

Conread position: 15-187
Cow position: chr24:29041982-29041818 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 15-238
Cow position: chr24:17955490-17955716 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 87

Conread position: 15-240
Cow position: chr24:18390338-18390558 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 64

Conread position: 15-251
Cow position: chr24:20225694-20225456 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 40

Conread position: 15-255
Cow position: chr24:14337681-14337449 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 227, 50

Conread position: 15-255
Cow position: chr24:27941059-27941293 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 76, 64

Conread position: 15-255
Cow position: chr24:42007690-42007461 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 15-256
Cow position: chr24:27719805-27720038 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 67

Conread position: 16-250
Cow position: chr24:28062900-28062665 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 87, 27

Conread position: 16-254
Cow position: chr24:19465973-19466217 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 9

Conread position: 17-240
Cow position: chr24:35529867-35529653 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 17-256
Cow position: chr24:3493836-3493607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 55

Conread position: 17-263
Cow position: chr24:25677986-25677742 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 17-277
Cow position: chr24:32369970-32370218 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 214, 115

Conread position: 19-229
Cow position: chr24:21264562-21264770 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 152

Conread position: 20-159
Cow position: chr24:29691345-29691488 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 20-175
Cow position: chr24:7401274-7401424 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 20-231
Cow position: chr24:43448656-43448856 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 79

Conread position: 21-234
Cow position: chr24:29389185-29388982 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 72

Conread position: 21-256
Cow position: chr24:28279580-28279358 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 22-256
Cow position: chr24:814328-814551 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 23-148
Cow position: chr24:11201702-11201830 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 26-256
Cow position: chr24:19658497-19658261 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 82

Conread position: 27-240
Cow position: chr24:591852-591640 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 77

Conread position: 35-208
Cow position: chr24:22305476-22305316 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 35-251
Cow position: chr24:39500348-39500564 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 129

Conread position: 38-251
Cow position: chr24:42943183-42943403 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 130

Show alignments to all cow chromosomes.