Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-132
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 31

Conread position: 1-241
Cow position:
Alignm length: 241
Alignm identity: 186
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 1-255
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 105

Conread position: 1-280
Cow position:
Alignm length: 285
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 100

Conread position: 4-141
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-149
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 4-218
Cow position:
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 4-230
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 99, 78

Conread position: 4-243
Cow position:
Alignm length: 240
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 0

Conread position: 4-252
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 48

Conread position: 4-256
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 19

Conread position: 4-272
Cow position:
Alignm length: 270
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 254, 21

Conread position: 4-273
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 258, 21

Conread position: 5-128
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 5-142
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 5-144
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 127, 0

Conread position: 5-181
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 151

Conread position: 5-243
Cow position:
Alignm length: 241
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 48

Conread position: 5-246
Cow position:
Alignm length: 244
Alignm identity: 185
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 124, 47

Conread position: 5-256
Cow position:
Alignm length: 254
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 150

Conread position: 5-259
Cow position:
Alignm length: 257
Alignm identity: 195
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 120, 20

Conread position: 5-269
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 63

Conread position: 6-284
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 251, 19

Conread position: 7-161
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 7-255
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 8-160
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 148

Conread position: 8-233
Cow position:
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 162, 71

Conread position: 8-240
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 38, 80

Conread position: 8-241
Cow position:
Alignm length: 235
Alignm identity: 183
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 90

Conread position: 8-256
Cow position:
Alignm length: 250
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 17

Conread position: 8-256
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 60, 122

Conread position: 8-275
Cow position:
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 98, 175

Conread position: 8-286
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 10, 64

Conread position: 9-220
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 12, 63

Conread position: 9-251
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 206, 78

Conread position: 9-253
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 66

Conread position: 9-256
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 14

Conread position: 9-257
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 9-264
Cow position:
Alignm length: 258
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 63

Conread position: 9-267
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 70

Conread position: 9-290
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 25, 9

Conread position: 10-228
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 20, 81

Conread position: 10-248
Cow position:
Alignm length: 239
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 10-253
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 212, 145

Conread position: 10-255
Cow position:
Alignm length: 247
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 8, 85

Conread position: 10-319
Cow position:
Alignm length: 311
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 23, 145

Conread position: 11-218
Cow position:
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 7, 81

Conread position: 11-251
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 11-261
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 93

Conread position: 11-270
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 14, 26

Conread position: 11-275
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 12, 149

Conread position: 12-247
Cow position:
Alignm length: 239
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 19

Conread position: 12-256
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 53, 0

Conread position: 12-256
Cow position:
Alignm length: 246
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 81

Conread position: 12-262
Cow position:
Alignm length: 253
Alignm identity: 179
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 216, 59

Conread position: 12-265
Cow position:
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 99

Conread position: 12-272
Cow position:
Alignm length: 263
Alignm identity: 181
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 81

Conread position: 12-273
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 71

Conread position: 13-247
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 79, 73

Conread position: 14-247
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 36

Conread position: 14-256
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 14-256
Cow position:
Alignm length: 245
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 68

Conread position: 14-270
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 244, 66

Conread position: 15-187
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 15-238
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 8, 87

Conread position: 15-240
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 64

Conread position: 15-251
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 40

Conread position: 15-255
Cow position:
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 227, 50

Conread position: 15-255
Cow position:
Alignm length: 242
Alignm identity: 173
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 76, 64

Conread position: 15-255
Cow position:
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 15-256
Cow position:
Alignm length: 243
Alignm identity: 168
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 67

Conread position: 16-250
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 87, 27

Conread position: 16-254
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 67, 9

Conread position: 17-240
Cow position:
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 17-256
Cow position:
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 55

Conread position: 17-263
Cow position:
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 17-277
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 214, 115

Conread position: 19-229
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 152

Conread position: 20-159
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 20-175
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 20-231
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 79

Conread position: 21-234
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 72

Conread position: 21-256
Cow position:
Alignm length: 236
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 23, 0

Conread position: 22-256
Cow position:
Alignm length: 235
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 23-148
Cow position:
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 26-256
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 7, 82

Conread position: 27-240
Cow position:
Alignm length: 217
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 77

Conread position: 35-208
Cow position:
Alignm length: 174
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 35-251
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 129

Conread position: 38-251
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 130

Show alignments to all cow chromosomes.