Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-126
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 23

Conread position: 1-216
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 1-250
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 92

Conread position: 1-276
Cow position:
Alignm length: 279
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 99

Conread position: 2-250
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 80, 0

Conread position: 3-256
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 229

Conread position: 4-220
Cow position:
Alignm length: 219
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 96

Conread position: 4-251
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 21, 76

Conread position: 4-251
Cow position:
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 170, 22

Conread position: 4-251
Cow position:
Alignm length: 250
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 228

Conread position: 4-254
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 4-254
Cow position:
Alignm length: 253
Alignm identity: 177
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 79, 14

Conread position: 4-255
Cow position:
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 26

Conread position: 4-256
Cow position:
Alignm length: 254
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 151

Conread position: 4-270
Cow position:
Alignm length: 268
Alignm identity: 174
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 253, 26

Conread position: 4-272
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 68

Conread position: 5-119
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 5-128
Cow position:
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 5-228
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 151

Conread position: 5-244
Cow position:
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 150

Conread position: 5-245
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 121

Conread position: 5-256
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 49

Conread position: 5-263
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 5-269
Cow position:
Alignm length: 267
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 13, 132

Conread position: 6-251
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 192, 76

Conread position: 7-256
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 8-173
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 71

Conread position: 8-241
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 11, 29

Conread position: 8-251
Cow position:
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 8-263
Cow position:
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 75, 17

Conread position: 8-264
Cow position:
Alignm length: 259
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 194

Conread position: 9-178
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 14

Conread position: 9-236
Cow position:
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 69

Conread position: 9-254
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 0

Conread position: 9-256
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 9-256
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 18

Conread position: 9-272
Cow position:
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 123

Conread position: 9-274
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 45

Conread position: 9-289
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 245, 42

Conread position: 10-280
Cow position:
Alignm length: 276
Alignm identity: 187
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 94

Conread position: 11-256
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 52, 62

Conread position: 12-240
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 162, 18

Conread position: 12-256
Cow position:
Alignm length: 247
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 15, 82

Conread position: 13-178
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 80

Conread position: 13-233
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 13-251
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 125

Conread position: 13-274
Cow position:
Alignm length: 264
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 52

Conread position: 13-297
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 14-177
Cow position:
Alignm length: 172
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 14-187
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 42

Conread position: 14-229
Cow position:
Alignm length: 217
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 68

Conread position: 14-240
Cow position:
Alignm length: 228
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 166, 80

Conread position: 14-267
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 85, 68

Conread position: 14-272
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 69, 82

Conread position: 15-250
Cow position:
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 211, 10

Conread position: 15-255
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 16-165
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 94

Conread position: 18-256
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 18-288
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 65, 83

Conread position: 19-172
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 19-255
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 19-260
Cow position:
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 20-251
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 20-251
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 21-245
Cow position:
Alignm length: 227
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 184

Conread position: 21-256
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 34

Conread position: 21-262
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 62, 74

Conread position: 22-256
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 61, 82

Conread position: 26-215
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.