Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-153
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 1-191
Cow position:
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 19

Conread position: 2-315
Cow position:
Alignm length: 317
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 77

Conread position: 3-199
Cow position:
Alignm length: 198
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 90

Conread position: 4-214
Cow position:
Alignm length: 214
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 100

Conread position: 4-245
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 4-245
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 18

Conread position: 4-249
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 13, 62

Conread position: 4-251
Cow position:
Alignm length: 248
Alignm identity: 172
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 4-384
Cow position:
Alignm length: 390
Alignm identity: 221
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 18, 68

Conread position: 5-195
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 5-240
Cow position:
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 5-251
Cow position:
Alignm length: 250
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 5-253
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 37

Conread position: 5-288
Cow position:
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 5-303
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 12, 137

Conread position: 6-256
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 66

Conread position: 6-347
Cow position:
Alignm length: 354
Alignm identity: 224
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 88

Conread position: 7-153
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 81

Conread position: 8-205
Cow position:
Alignm length: 204
Alignm identity: 156
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 86, 139

Conread position: 8-254
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 14, 37

Conread position: 8-257
Cow position:
Alignm length: 251
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 40

Conread position: 8-268
Cow position:
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 58

Conread position: 9-247
Cow position:
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 9

Conread position: 9-251
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 94, 73

Conread position: 9-255
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 40, 85

Conread position: 9-274
Cow position:
Alignm length: 278
Alignm identity: 191
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 74, 10

Conread position: 9-274
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 10-129
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 10-247
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 10-251
Cow position:
Alignm length: 244
Alignm identity: 178
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 52

Conread position: 11-178
Cow position:
Alignm length: 169
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 61

Conread position: 11-240
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 11-262
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 101

Conread position: 12-218
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 12-256
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 12-256
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 12-274
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 14, 82

Conread position: 12-302
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 13, 0

Conread position: 13-175
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 58

Conread position: 14-124
Cow position:
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 14-247
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 31, 15

Conread position: 14-319
Cow position:
Alignm length: 309
Alignm identity: 205
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 13, 70

Conread position: 15-248
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 89

Conread position: 15-257
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 9, 91

Conread position: 16-256
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 75

Conread position: 17-250
Cow position:
Alignm length: 236
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 211

Conread position: 17-251
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 17-254
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 87

Conread position: 19-255
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 19-255
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 86

Conread position: 19-296
Cow position:
Alignm length: 279
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 235

Conread position: 20-274
Cow position:
Alignm length: 257
Alignm identity: 183
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 206, 13

Conread position: 20-289
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 232, 91

Conread position: 21-251
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 120, 0

Conread position: 23-246
Cow position:
Alignm length: 224
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 24-268
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 6, 132

Conread position: 24-295
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 61

Conread position: 32-256
Cow position:
Alignm length: 226
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 53

Conread position: 45-223
Cow position:
Alignm length: 179
Alignm identity: 140
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 87-249
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.