Cow genome map
| Conread name: | rspl40_a19.y1 |
| Conread position: | 1-153 |
| Cow position: | chr26:27585779-27585628 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 1-191 |
| Cow position: | chr26:21921637-21921813 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 2-315 |
| Cow position: | chr26:2769836-2770142 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 77 |
| Conread position: | 3-199 |
| Cow position: | chr26:6252855-6252659 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 90 |
| Conread position: | 4-214 |
| Cow position: | chr26:16510791-16510583 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 100 |
| Conread position: | 4-245 |
| Cow position: | chr26:2389049-2389285 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 4-245 |
| Cow position: | chr26:31779482-31779240 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 18 |
| Conread position: | 4-249 |
| Cow position: | chr26:12669200-12668962 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 4-251 |
| Cow position: | chr26:23925985-23926218 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 4-384 |
| Cow position: | chr26:23097180-23097556 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 5-195 |
| Cow position: | chr26:3019415-3019612 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-240 |
| Cow position: | chr26:20129671-20129904 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 5-251 |
| Cow position: | chr26:33745922-33745673 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 5-253 |
| Cow position: | chr26:782931-783175 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 5-288 |
| Cow position: | chr26:17289207-17288932 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 5-303 |
| Cow position: | chr26:9666407-9666699 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 137 |
| Conread position: | 6-256 |
| Cow position: | chr26:11134694-11134941 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 6-347 |
| Cow position: | chr26:34314691-34314341 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 7-153 |
| Cow position: | chr26:12520024-12519872 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 81 |
| Conread position: | 8-205 |
| Cow position: | chr26:19110909-19110708 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 86, 139 |
| Conread position: | 8-254 |
| Cow position: | chr26:17204148-17204381 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 8-257 |
| Cow position: | chr26:31794771-31794527 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 40 |
| Conread position: | 8-268 |
| Cow position: | chr26:9632373-9632626 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 58 |
| Conread position: | 9-247 |
| Cow position: | chr26:5246483-5246724 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 9 |
| Conread position: | 9-251 |
| Cow position: | chr26:25394028-25393790 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 94, 73 |
| Conread position: | 9-255 |
| Cow position: | chr26:6475432-6475671 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 40, 85 |
| Conread position: | 9-274 |
| Cow position: | chr26:19459681-19459409 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 74, 10 |
| Conread position: | 9-274 |
| Cow position: | chr26:34032092-34031839 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-129 |
| Cow position: | chr26:22975269-22975152 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 10-247 |
| Cow position: | chr26:19769088-19769321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 10-251 |
| Cow position: | chr26:14924480-14924259 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 52 |
| Conread position: | 11-178 |
| Cow position: | chr26:23315766-23315599 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 61 |
| Conread position: | 11-240 |
| Cow position: | chr26:8504260-8504029 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 11-262 |
| Cow position: | chr26:22161868-22162120 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 101 |
| Conread position: | 12-218 |
| Cow position: | chr26:14364092-14364290 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 12-256 |
| Cow position: | chr26:3071971-3072208 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 12-256 |
| Cow position: | chr26:3706788-3706555 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 12-274 |
| Cow position: | chr26:16549980-16549717 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 12-302 |
| Cow position: | chr26:8811123-8810844 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 13-175 |
| Cow position: | chr26:19178610-19178456 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 58 |
| Conread position: | 14-124 |
| Cow position: | chr26:20445108-20445219 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 14-247 |
| Cow position: | chr26:4747859-4748093 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 14-319 |
| Cow position: | chr26:10767917-10768208 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 70 |
| Conread position: | 15-248 |
| Cow position: | chr26:21243093-21242867 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 15-257 |
| Cow position: | chr26:25737467-25737225 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 16-256 |
| Cow position: | chr26:18231357-18231122 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 75 |
| Conread position: | 17-250 |
| Cow position: | chr26:29353517-29353751 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 211 |
| Conread position: | 17-251 |
| Cow position: | chr26:2246944-2246708 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 17-254 |
| Cow position: | chr26:8277577-8277815 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 87 |
| Conread position: | 19-255 |
| Cow position: | chr26:10814187-10813970 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-255 |
| Cow position: | chr26:27491514-27491746 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 57, 86 |
| Conread position: | 19-296 |
| Cow position: | chr26:7103044-7103317 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 235 |
| Conread position: | 20-274 |
| Cow position: | chr26:3921768-3922010 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 206, 13 |
| Conread position: | 20-289 |
| Cow position: | chr26:2609814-2610080 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 232, 91 |
| Conread position: | 21-251 |
| Cow position: | chr26:6828155-6827926 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 23-246 |
| Cow position: | chr26:9064324-9064112 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 24-268 |
| Cow position: | chr26:33227793-33227550 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 6, 132 |
| Conread position: | 24-295 |
| Cow position: | chr26:4664450-4664710 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 32-256 |
| Cow position: | chr26:31890068-31889845 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 53 |
| Conread position: | 45-223 |
| Cow position: | chr26:21339787-21339613 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 87-249 |
| Cow position: | chr26:12216767-12216615 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.