Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-148
Cow position:
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 1-176
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 99

Conread position: 1-212
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 98, 81

Conread position: 1-228
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 143

Conread position: 1-256
Cow position:
Alignm length: 259
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 143

Conread position: 1-256
Cow position:
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 151, 0

Conread position: 2-251
Cow position:
Alignm length: 251
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 64

Conread position: 2-275
Cow position:
Alignm length: 276
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 250, 63

Conread position: 4-251
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 132

Conread position: 4-255
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 18, 76

Conread position: 4-256
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 19

Conread position: 4-305
Cow position:
Alignm length: 307
Alignm identity: 215
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 14, 81

Conread position: 5-177
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 94

Conread position: 5-211
Cow position:
Alignm length: 207
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 5-229
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 14

Conread position: 5-235
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 99

Conread position: 5-256
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 86

Conread position: 5-262
Cow position:
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 81

Conread position: 5-264
Cow position:
Alignm length: 261
Alignm identity: 197
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 15, 62

Conread position: 5-273
Cow position:
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 87

Conread position: 5-289
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 252, 24

Conread position: 6-256
Cow position:
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 37

Conread position: 6-264
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 93, 13

Conread position: 6-304
Cow position:
Alignm length: 299
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 7-275
Cow position:
Alignm length: 272
Alignm identity: 201
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 246, 23

Conread position: 8-138
Cow position:
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 0

Conread position: 8-252
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 28, 42

Conread position: 8-254
Cow position:
Alignm length: 249
Alignm identity: 177
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 10, 46

Conread position: 8-255
Cow position:
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 68

Conread position: 8-272
Cow position:
Alignm length: 269
Alignm identity: 197
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 76

Conread position: 9-189
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 9-197
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 9, 40

Conread position: 9-228
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 74, 95

Conread position: 9-229
Cow position:
Alignm length: 222
Alignm identity: 175
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 9, 27

Conread position: 9-247
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 9

Conread position: 9-251
Cow position:
Alignm length: 247
Alignm identity: 173
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 104, 17

Conread position: 9-255
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 49, 98

Conread position: 9-256
Cow position:
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 90

Conread position: 9-256
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 12, 90

Conread position: 10-240
Cow position:
Alignm length: 231
Alignm identity: 157
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 10-256
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 21

Conread position: 10-256
Cow position:
Alignm length: 248
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 73, 9

Conread position: 10-303
Cow position:
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 142

Conread position: 11-245
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 11-247
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 0

Conread position: 11-274
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 96, 71

Conread position: 11-301
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 182, 60

Conread position: 12-256
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 12-256
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 21

Conread position: 12-270
Cow position:
Alignm length: 259
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 12-308
Cow position:
Alignm length: 301
Alignm identity: 199
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 234, 20

Conread position: 13-178
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 20, 43

Conread position: 13-189
Cow position:
Alignm length: 177
Alignm identity: 147
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 0

Conread position: 13-235
Cow position:
Alignm length: 230
Alignm identity: 164
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 13-265
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 92

Conread position: 13-274
Cow position:
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 14-180
Cow position:
Alignm length: 170
Alignm identity: 142
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 6, 0

Conread position: 14-256
Cow position:
Alignm length: 246
Alignm identity: 179
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 158

Conread position: 14-256
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 0

Conread position: 14-274
Cow position:
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 23

Conread position: 15-213
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 70

Conread position: 15-247
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 107, 84

Conread position: 15-251
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 155, 16

Conread position: 15-251
Cow position:
Alignm length: 238
Alignm identity: 170
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 12, 68

Conread position: 15-253
Cow position:
Alignm length: 240
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 123

Conread position: 15-254
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 211, 99

Conread position: 16-169
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 17-181
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 17-189
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 17-251
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 214

Conread position: 18-256
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 13

Conread position: 18-256
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 17, 81

Conread position: 19-247
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 120

Conread position: 19-264
Cow position:
Alignm length: 249
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 60

Conread position: 24-187
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 24-264
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 202, 11

Conread position: 25-255
Cow position:
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 27-240
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 55

Conread position: 27-246
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 5

Conread position: 28-229
Cow position:
Alignm length: 202
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 134, 0

Conread position: 28-273
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 77

Conread position: 31-297
Cow position:
Alignm length: 270
Alignm identity: 204
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 218, 40

Conread position: 62-247
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 0

Show alignments to all cow chromosomes.