Cow genome map

Conread name: rspl40_a19.y1

Conread position: 1-171
Cow position: chr5:58748782-58748611 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 1-236
Cow position: chr5:27615531-27615298 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 145

Conread position: 1-256
Cow position: chr5:16893758-16894012 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 22, 87

Conread position: 2-256
Cow position: chr5:45940602-45940843 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 224, 21

Conread position: 4-177
Cow position: chr5:37068900-37068734 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 4-192
Cow position: chr5:41452656-41452839 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 76

Conread position: 4-202
Cow position: chr5:55928953-55928760 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 85

Conread position: 4-218
Cow position: chr5:1688103-1688311 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 4-228
Cow position: chr5:58320459-58320670 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 78, 39

Conread position: 4-245
Cow position: chr5:68081965-68082192 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 14, 42

Conread position: 4-250
Cow position: chr5:68481248-68480994 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 77, 19

Conread position: 4-251
Cow position: chr5:14154161-14153911 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 4-251
Cow position: chr5:17063076-17063325 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 81

Conread position: 4-251
Cow position: chr5:61488097-61488342 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 0

Conread position: 4-256
Cow position: chr5:22934441-22934692 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 61

Conread position: 4-256
Cow position: chr5:52165168-52165418 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 4-257
Cow position: chr5:40387863-40388103 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 0

Conread position: 4-260
Cow position: chr5:66831701-66831953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 14, 144

Conread position: 4-262
Cow position: chr5:31481157-31480910 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 72, 65

Conread position: 4-264
Cow position: chr5:25919621-25919857 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 4-264
Cow position: chr5:65924680-65924942 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 184

Conread position: 5-167
Cow position: chr5:44417338-44417502 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 123

Conread position: 5-204
Cow position: chr5:36486504-36486301 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 5-214
Cow position: chr5:31561545-31561341 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 149

Conread position: 5-230
Cow position: chr5:6896115-6896337 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 10, 114

Conread position: 5-247
Cow position: chr5:37713886-37714132 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 5-262
Cow position: chr5:23536181-23535928 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 62

Conread position: 5-264
Cow position: chr5:3442474-3442217 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 36

Conread position: 5-270
Cow position: chr5:41604636-41604360 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 168

Conread position: 5-275
Cow position: chr5:13044383-13044666 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 265

Conread position: 5-287
Cow position: chr5:1343843-1344120 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 238

Conread position: 5-289
Cow position: chr5:41636880-41636604 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 55

Conread position: 5-304
Cow position: chr5:70581885-70582187 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 91

Conread position: 6-161
Cow position: chr5:48405169-48405319 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 17

Conread position: 6-250
Cow position: chr5:10789667-10789908 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 50

Conread position: 6-250
Cow position: chr5:39695656-39695426 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 0

Conread position: 6-256
Cow position: chr5:63987440-63987683 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 99

Conread position: 6-288
Cow position: chr5:30332954-30332674 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 133

Conread position: 7-255
Cow position: chr5:55756418-55756677 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 76, 12

Conread position: 8-142
Cow position: chr5:63188317-63188450 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 96

Conread position: 8-215
Cow position: chr5:24361533-24361338 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 8-239
Cow position: chr5:72173034-72172804 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 58

Conread position: 8-254
Cow position: chr5:12803518-12803260 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 63, 10

Conread position: 8-254
Cow position: chr5:42845589-42845834 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 133

Conread position: 8-256
Cow position: chr5:41229713-41229476 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 8-275
Cow position: chr5:67655343-67655064 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 186

Conread position: 9-139
Cow position: chr5:13906874-13906744 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 121, 17

Conread position: 9-178
Cow position: chr5:3752863-3752707 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 33

Conread position: 9-218
Cow position: chr5:32282342-32282132 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 9-246
Cow position: chr5:39710849-39710613 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 9-247
Cow position: chr5:34921832-34922062 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 9-247
Cow position: chr5:38805341-38805571 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 61

Conread position: 9-251
Cow position: chr5:40711431-40711674 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 90

Conread position: 9-254
Cow position: chr5:46509861-46510102 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 217, 70

Conread position: 9-255
Cow position: chr5:17028099-17027863 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 0

Conread position: 9-255
Cow position: chr5:48573765-48573996 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 9, 21

Conread position: 9-256
Cow position: chr5:48535808-48535570 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 186, 9

Conread position: 9-264
Cow position: chr5:45225817-45226070 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 96

Conread position: 9-268
Cow position: chr5:1276458-1276723 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 229

Conread position: 10-116
Cow position: chr5:21535108-21535215 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 10-184
Cow position: chr5:73526385-73526213 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 7, 93

Conread position: 10-200
Cow position: chr5:34167966-34167780 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 123

Conread position: 10-240
Cow position: chr5:1950057-1950280 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 70

Conread position: 10-251
Cow position: chr5:35209471-35209703 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 10-256
Cow position: chr5:54427602-54427835 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 74

Conread position: 10-256
Cow position: chr5:64399018-64398766 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 15

Conread position: 10-274
Cow position: chr5:16185091-16184835 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 257, 15

Conread position: 10-275
Cow position: chr5:9430458-9430717 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 51

Conread position: 11-197
Cow position: chr5:7552414-7552596 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 11-209
Cow position: chr5:53145881-53146075 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 11-256
Cow position: chr5:14314530-14314286 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 12, 72

Conread position: 11-256
Cow position: chr5:28946057-28946295 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 5, 89

Conread position: 11-256
Cow position: chr5:30816721-30816479 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 12

Conread position: 11-262
Cow position: chr5:35684940-35684691 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 247, 71

Conread position: 11-269
Cow position: chr5:65593877-65593631 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 247, 15

Conread position: 11-273
Cow position: chr5:72903228-72903476 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 65, 8

Conread position: 11-274
Cow position: chr5:34232746-34232488 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 30, 42

Conread position: 11-275
Cow position: chr5:48143780-48144047 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 12-254
Cow position: chr5:42064206-42063969 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 70

Conread position: 12-256
Cow position: chr5:15882463-15882717 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 54, 0

Conread position: 12-256
Cow position: chr5:43923155-43923385 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 178, 59

Conread position: 12-256
Cow position: chr5:51076643-51076881 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 8, 76

Conread position: 12-257
Cow position: chr5:65776378-65776623 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 71

Conread position: 12-275
Cow position: chr5:23753219-23753481 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 141, 12

Conread position: 12-309
Cow position: chr5:458494-458188 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 154

Conread position: 13-154
Cow position: chr5:73556189-73556324 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 13-155
Cow position: chr5:42794879-42795013 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 13-175
Cow position: chr5:59356995-59356831 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 13-179
Cow position: chr5:38629289-38629128 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 0

Conread position: 13-247
Cow position: chr5:32696820-32697040 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 54

Conread position: 13-251
Cow position: chr5:56385231-56384996 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 18

Conread position: 13-255
Cow position: chr5:6086556-6086797 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 66

Conread position: 13-256
Cow position: chr5:59303279-59303504 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 62, 38

Conread position: 13-261
Cow position: chr5:27690057-27690299 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 73

Conread position: 13-264
Cow position: chr5:9083343-9083094 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 59

Conread position: 13-305
Cow position: chr5:51503013-51502724 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 92

Conread position: 14-181
Cow position: chr5:10248700-10248534 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 11, 66

Conread position: 14-201
Cow position: chr5:66281407-66281230 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 14-232
Cow position: chr5:72344137-72344354 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 67, 27

Conread position: 14-240
Cow position: chr5:27411396-27411610 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 14-245
Cow position: chr5:18104141-18104376 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 10

Conread position: 14-253
Cow position: chr5:49479332-49479111 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 40

Conread position: 14-267
Cow position: chr5:22839471-22839719 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 96

Conread position: 14-288
Cow position: chr5:29560411-29560144 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 15-162
Cow position: chr5:39181911-39182057 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 15-235
Cow position: chr5:23640989-23641207 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 40

Conread position: 15-255
Cow position: chr5:20974443-20974679 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 115

Conread position: 15-256
Cow position: chr5:58144601-58144842 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 91

Conread position: 15-262
Cow position: chr5:359943-360184 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 11

Conread position: 15-274
Cow position: chr5:17630878-17631130 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 205, 39

Conread position: 15-274
Cow position: chr5:29505108-29504861 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 9

Conread position: 16-175
Cow position: chr5:33265458-33265602 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 16-194
Cow position: chr5:29979988-29980160 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 16-248
Cow position: chr5:34184228-34183989 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 0

Conread position: 17-215
Cow position: chr5:50215556-50215754 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 88

Conread position: 17-251
Cow position: chr5:33467043-33467272 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 125

Conread position: 17-262
Cow position: chr5:44583130-44583361 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 84, 65

Conread position: 17-289
Cow position: chr5:26046332-26046066 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 7

Conread position: 17-297
Cow position: chr5:26595108-26595386 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 239, 74

Conread position: 18-233
Cow position: chr5:3649458-3649677 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 153

Conread position: 18-235
Cow position: chr5:62026950-62027161 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 58, 85

Conread position: 19-238
Cow position: chr5:45037017-45036804 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 75

Conread position: 19-240
Cow position: chr5:50425477-50425698 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 17

Conread position: 19-245
Cow position: chr5:50637823-50637605 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 67

Conread position: 19-247
Cow position: chr5:57127008-57126788 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 151, 12

Conread position: 19-248
Cow position: chr5:46294667-46294893 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 86

Conread position: 19-250
Cow position: chr5:65887011-65887244 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 64, 12

Conread position: 20-274
Cow position: chr5:34678888-34678638 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 67

Conread position: 20-304
Cow position: chr5:50900895-50900623 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 237, 64

Conread position: 21-251
Cow position: chr5:69773561-69773340 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 21-268
Cow position: chr5:19905273-19905525 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 242

Conread position: 22-240
Cow position: chr5:72564754-72564542 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 22-256
Cow position: chr5:6987156-6986922 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 69

Conread position: 24-139
Cow position: chr5:36407150-36407035 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 24-256
Cow position: chr5:31469591-31469819 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 80

Conread position: 24-275
Cow position: chr5:1398087-1398337 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 76, 211

Conread position: 25-258
Cow position: chr5:54404901-54405133 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 58, 79

Conread position: 27-218
Cow position: chr5:56518222-56518408 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 55

Conread position: 28-240
Cow position: chr5:54111909-54111698 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 0

Conread position: 28-256
Cow position: chr5:14538671-14538885 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 111, 0

Conread position: 28-256
Cow position: chr5:43329706-43329929 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 30-268
Cow position: chr5:40759961-40759732 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 30-273
Cow position: chr5:56753713-56753473 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 106

Conread position: 34-168
Cow position: chr5:1125734-1125600 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 70

Conread position: 36-233
Cow position: chr5:503938-504123 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 161
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 68-247
Cow position: chr5:31604687-31604859 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.