Cow genome map
| Conread name: | rspl40_a19.y1 |
| Conread position: | 1-151 |
| Cow position: | chrX:27449983-27450133 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 40 |
| Conread position: | 1-175 |
| Cow position: | chrX:24747384-24747550 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 103, 60 |
| Conread position: | 1-209 |
| Cow position: | chrX:2147360-2147146 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-247 |
| Cow position: | chrX:13245612-13245365 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 12, 186 |
| Conread position: | 1-251 |
| Cow position: | chrX:2648336-2648580 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 1-256 |
| Cow position: | chrX:28787368-28787131 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 16 |
| Conread position: | 1-256 |
| Cow position: | chrX:32743552-32743303 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 137 |
| Conread position: | 1-277 |
| Cow position: | chrX:15329660-15329397 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 257, 31 |
| Conread position: | 2-247 |
| Cow position: | chrX:4482976-4482736 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 2-273 |
| Cow position: | chrX:19930666-19930402 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 2-285 |
| Cow position: | chrX:27176301-27176583 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 48 |
| Conread position: | 3-266 |
| Cow position: | chrX:157761-158018 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 237, 126 |
| Conread position: | 4-157 |
| Cow position: | chrX:27287722-27287874 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 4-175 |
| Cow position: | chrX:8913932-8913765 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 4-175 |
| Cow position: | chrX:8915676-8915509 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 4-181 |
| Cow position: | chrX:40643000-40642807 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 4-189 |
| Cow position: | chrX:23667137-23666954 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 153 |
| Conread position: | 4-202 |
| Cow position: | chrX:38188064-38188264 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 7, 102 |
| Conread position: | 4-238 |
| Cow position: | chrX:29601818-29602050 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 89 |
| Conread position: | 4-239 |
| Cow position: | chrX:11633692-11633460 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 4-251 |
| Cow position: | chrX:18456415-18456162 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-252 |
| Cow position: | chrX:25232603-25232359 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 4-255 |
| Cow position: | chrX:20376980-20376733 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 4-255 |
| Cow position: | chrX:34441438-34441684 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 4-256 |
| Cow position: | chrX:42994623-42994379 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 4-262 |
| Cow position: | chrX:25338198-25337937 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-267 |
| Cow position: | chrX:13382341-13382079 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 79, 14 |
| Conread position: | 4-272 |
| Cow position: | chrX:41743924-41743664 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 4-287 |
| Cow position: | chrX:24259571-24259851 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 244, 83 |
| Conread position: | 4-288 |
| Cow position: | chrX:20752264-20751995 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 4-289 |
| Cow position: | chrX:17630793-17631071 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 4-297 |
| Cow position: | chrX:27680408-27680122 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 5-105 |
| Cow position: | chrX:7345097-7344999 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 86 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 5-108 |
| Cow position: | chrX:16418870-16418768 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 5-109 |
| Cow position: | chrX:17895939-17896042 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 5-139 |
| Cow position: | chrX:6656396-6656264 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 5-154 |
| Cow position: | chrX:18417580-18417726 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 5-196 |
| Cow position: | chrX:46028971-46029157 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 12, 37 |
| Conread position: | 5-197 |
| Cow position: | chrX:38999865-38999667 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 72, 14 |
| Conread position: | 5-237 |
| Cow position: | chrX:41560242-41560455 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 5-247 |
| Cow position: | chrX:13322986-13323226 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 224, 66 |
| Conread position: | 5-250 |
| Cow position: | chrX:488504-488261 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 157 |
| Conread position: | 5-250 |
| Cow position: | chrX:36840882-36840644 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 5-256 |
| Cow position: | chrX:3154233-3154481 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 5-257 |
| Cow position: | chrX:34565292-34565061 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 5-274 |
| Cow position: | chrX:25419145-25419416 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 227 |
| Conread position: | 5-275 |
| Cow position: | chrX:160021-160287 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 144 |
| Conread position: | 5-275 |
| Cow position: | chrX:6563533-6563257 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 198 |
| Conread position: | 6-200 |
| Cow position: | chrX:6480007-6479825 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 6-244 |
| Cow position: | chrX:10302346-10302116 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-250 |
| Cow position: | chrX:25713801-25713571 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 6-251 |
| Cow position: | chrX:26625665-26625907 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 6-256 |
| Cow position: | chrX:35609998-35609751 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 7-224 |
| Cow position: | chrX:31340716-31340501 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-247 |
| Cow position: | chrX:29032419-29032191 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 7-254 |
| Cow position: | chrX:47967611-47967366 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 8-219 |
| Cow position: | chrX:33000910-33000705 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 17 |
| Conread position: | 8-240 |
| Cow position: | chrX:46072813-46073041 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 218, 17 |
| Conread position: | 8-246 |
| Cow position: | chrX:20791809-20792043 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 8-251 |
| Cow position: | chrX:34238723-34238491 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 152, 63 |
| Conread position: | 8-256 |
| Cow position: | chrX:8731094-8730844 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 75, 24 |
| Conread position: | 8-256 |
| Cow position: | chrX:21664713-21664957 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 134 |
| Conread position: | 8-256 |
| Cow position: | chrX:36693244-36693000 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 8-262 |
| Cow position: | chrX:40789218-40788961 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 80 |
| Conread position: | 8-264 |
| Cow position: | chrX:32310111-32309864 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 8-272 |
| Cow position: | chrX:33827008-33827274 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 8-305 |
| Cow position: | chrX:30862322-30862016 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 14, 288 |
| Conread position: | 9-160 |
| Cow position: | chrX:19879052-19878907 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 9-229 |
| Cow position: | chrX:6234445-6234657 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 95 |
| Conread position: | 9-246 |
| Cow position: | chrX:21642471-21642703 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 9-247 |
| Cow position: | chrX:618997-619234 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 94, 62 |
| Conread position: | 9-251 |
| Cow position: | chrX:17271276-17271519 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 59 |
| Conread position: | 9-251 |
| Cow position: | chrX:23414363-23414598 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 9-251 |
| Cow position: | chrX:39701230-39700997 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 9-254 |
| Cow position: | chrX:23497662-23497896 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 94, 9 |
| Conread position: | 9-255 |
| Cow position: | chrX:11856435-11856195 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 55 |
| Conread position: | 9-256 |
| Cow position: | chrX:38439486-38439238 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 9-261 |
| Cow position: | chrX:17725980-17725737 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 247, 15 |
| Conread position: | 9-271 |
| Cow position: | chrX:32431628-32431376 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 177, 89 |
| Conread position: | 9-276 |
| Cow position: | chrX:1616036-1616306 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 10-226 |
| Cow position: | chrX:39938518-39938728 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 10-228 |
| Cow position: | chrX:48248830-48248617 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 10-247 |
| Cow position: | chrX:33639979-33639745 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 146 |
| Conread position: | 10-251 |
| Cow position: | chrX:24132144-24132381 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 10-254 |
| Cow position: | chrX:35681347-35681112 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 73, 94 |
| Conread position: | 10-255 |
| Cow position: | chrX:34192677-34192442 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 93, 60 |
| Conread position: | 10-256 |
| Cow position: | chrX:17541964-17541729 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 10-256 |
| Cow position: | chrX:27516534-27516297 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 10-271 |
| Cow position: | chrX:29121051-29120810 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 10-282 |
| Cow position: | chrX:27509016-27509281 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 19, 73 |
| Conread position: | 10-292 |
| Cow position: | chrX:36975957-36975677 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 11-113 |
| Cow position: | chrX:12725744-12725641 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 11-150 |
| Cow position: | chrX:41070943-41070804 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 30 |
| Conread position: | 11-162 |
| Cow position: | chrX:31273250-31273098 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 11-247 |
| Cow position: | chrX:16416515-16416282 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 11-251 |
| Cow position: | chrX:6278495-6278736 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 11-268 |
| Cow position: | chrX:26875878-26876129 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 11-332 |
| Cow position: | chrX:37956366-37956056 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 9, 76 |
| Conread position: | 12-199 |
| Cow position: | chrX:16514260-16514443 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 12-227 |
| Cow position: | chrX:36961647-36961428 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 12-247 |
| Cow position: | chrX:14900725-14900947 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 12-256 |
| Cow position: | chrX:29289584-29289341 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 12-274 |
| Cow position: | chrX:33466612-33466361 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 12-275 |
| Cow position: | chrX:1514406-1514653 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 13-168 |
| Cow position: | chrX:39415365-39415517 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 13-236 |
| Cow position: | chrX:2786555-2786763 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 13-251 |
| Cow position: | chrX:28580231-28579991 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 13-256 |
| Cow position: | chrX:40647990-40647743 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 92 |
| Conread position: | 13-268 |
| Cow position: | chrX:630306-630557 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 10 |
| Conread position: | 13-302 |
| Cow position: | chrX:11746850-11746560 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 143 |
| Conread position: | 13-317 |
| Cow position: | chrX:11589583-11589891 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 67 |
| Conread position: | 14-182 |
| Cow position: | chrX:33590734-33590566 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 16, 145 |
| Conread position: | 14-232 |
| Cow position: | chrX:8917845-8917642 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 14-245 |
| Cow position: | chrX:17042695-17042466 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 14-251 |
| Cow position: | chrX:2029392-2029160 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 14-253 |
| Cow position: | chrX:46315374-46315611 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 14-255 |
| Cow position: | chrX:11562161-11561920 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 68 |
| Conread position: | 14-256 |
| Cow position: | chrX:9161587-9161353 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 14-270 |
| Cow position: | chrX:16283939-16284195 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 14-289 |
| Cow position: | chrX:38840891-38840623 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 15-195 |
| Cow position: | chrX:46146562-46146735 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 15-237 |
| Cow position: | chrX:40567603-40567383 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 39 |
| Conread position: | 15-292 |
| Cow position: | chrX:17662592-17662870 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 199 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 238, 64 |
| Conread position: | 16-216 |
| Cow position: | chrX:47178155-47177958 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 16-254 |
| Cow position: | chrX:7497240-7497012 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 58, 79 |
| Conread position: | 16-256 |
| Cow position: | chrX:38936697-38936466 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 16-262 |
| Cow position: | chrX:28134346-28134106 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 16-341 |
| Cow position: | chrX:21672555-21672225 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 87, 9 |
| Conread position: | 17-256 |
| Cow position: | chrX:19188937-19188701 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 81, 65 |
| Conread position: | 17-256 |
| Cow position: | chrX:30162996-30162762 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 17-297 |
| Cow position: | chrX:2383488-2383212 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 120, 62 |
| Conread position: | 17-303 |
| Cow position: | chrX:8681928-8682213 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 163 |
| Conread position: | 19-200 |
| Cow position: | chrX:30005263-30005089 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 19-206 |
| Cow position: | chrX:25967032-25966855 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 19-238 |
| Cow position: | chrX:28929834-28929625 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 19-256 |
| Cow position: | chrX:754960-754723 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 74 |
| Conread position: | 19-256 |
| Cow position: | chrX:40452213-40452448 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 19-268 |
| Cow position: | chrX:16789855-16790083 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 19-274 |
| Cow position: | chrX:17744063-17743807 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 19-275 |
| Cow position: | chrX:43075984-43075742 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 238, 36 |
| Conread position: | 20-256 |
| Cow position: | chrX:33803010-33803248 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 21-216 |
| Cow position: | chrX:18216281-18216081 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 21-236 |
| Cow position: | chrX:35284615-35284407 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 21-240 |
| Cow position: | chrX:24201181-24200973 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-272 |
| Cow position: | chrX:1978506-1978254 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 53 |
| Conread position: | 21-274 |
| Cow position: | chrX:27446691-27446435 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 62, 120 |
| Conread position: | 22-246 |
| Cow position: | chrX:25571002-25571221 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 200, 65 |
| Conread position: | 22-247 |
| Cow position: | chrX:39558356-39558574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 204, 60 |
| Conread position: | 22-275 |
| Cow position: | chrX:42282422-42282177 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 140, 60 |
| Conread position: | 23-256 |
| Cow position: | chrX:41674103-41673867 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 25-256 |
| Cow position: | chrX:8925692-8925468 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 190, 57 |
| Conread position: | 25-274 |
| Cow position: | chrX:12116037-12115785 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 32-240 |
| Cow position: | chrX:36283336-36283126 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 36-275 |
| Cow position: | chrX:25411821-25411585 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 46 |
| Conread position: | 66-261 |
| Cow position: | chrX:9041286-9041469 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 87-278 |
| Cow position: | chrX:6607353-6607163 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 156 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 171, 139 |
Show alignments to all cow chromosomes.