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Cow genome map

           
Conread name:
           
rssp11_a9.y1
        

               
Conread position:
               
1-178
               

               
Cow position:
               
chr10:48388342-48388510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr10:31779341-31779517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr10:37709106-37709292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr10:54962796-54962975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr10:318765-318951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr10:22341497-22341307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr10:36489948-36489760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr10:52113741-52113938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
187, 19
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr10:63276322-63276117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr10:48377711-48377921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr10:6173286-6173066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
187, 20
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr10:7304507-7304280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr10:24871818-24871596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr10:47165797-47165573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
193, 20
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr10:54477036-54476795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr10:64878060-64878303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 17
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr10:35862295-35862540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:5543318-5543563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:10720743-10720997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:19895327-19895087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:20132596-20132839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:24548186-24547946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:26209322-26209574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:49045773-49045531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr10:50200644-50200391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:888855-888616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 8
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:13368280-13368037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:19104240-19104496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:22567512-22567751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr10:27716911-27717152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 20
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr10:38370530-38370719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr10:2449276-2449075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
186, 19
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr10:60032643-60032860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr10:45379076-45379242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr10:56080243-56080476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
116, 19
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr10:47091629-47091858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
224, 115
               

               
Conread position:
               
9-246
               

               
Cow position:
               
chr10:40924466-40924224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
15-159
               

               
Cow position:
               
chr10:66194384-66194528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-245
               

               
Cow position:
               
chr10:66127783-66127544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr10:10752061-10752292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
21-191
               

               
Cow position:
               
chr10:58690806-58690648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr10:50533956-50534149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
21-245
               

               
Cow position:
               
chr10:22321438-22321214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 168
               

               
Conread position:
               
22-192
               

               
Cow position:
               
chr10:59141343-59141171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr10:57457248-57457041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
22-246
               

               
Cow position:
               
chr10:16598599-16598375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr10:9798286-9798480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
23-245
               

               
Cow position:
               
chr10:30441124-30441355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
74, 45
               

               
Conread position:
               
24-185
               

               
Cow position:
               
chr10:24312975-24313139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
24-197
               

               
Cow position:
               
chr10:2853733-2853908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
24-204
               

               
Cow position:
               
chr10:23376552-23376735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr10:1976405-1976612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr10:17983096-17982897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
51, 178
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr10:41397393-41397188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr10:48259320-48259522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
24-233
               

               
Cow position:
               
chr10:69934859-69935078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
24-237
               

               
Cow position:
               
chr10:34607470-34607253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr10:16740144-16740371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr10:19402846-19402625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 210
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:10048595-10048375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:16645278-16645507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:32928677-32928457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:52569502-52569282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:55580353-55580571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:56835194-56834966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:57033879-57034103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:64876429-64876208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
24-245
               

               
Cow position:
               
chr10:67716897-67716671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 128
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr10:29628039-29628267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr10:43451002-43451228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
50, 195
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr10:43487622-43487400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
103, 77
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr10:52152433-52152209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
24-246
               

               
Cow position:
               
chr10:69698895-69698670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 142
               

               
Conread position:
               
25-215
               

               
Cow position:
               
chr10:54936200-54936395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
26-159
               

               
Cow position:
               
chr10:33732959-33733093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
26-161
               

               
Cow position:
               
chr10:46493089-46493229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
26-171
               

               
Cow position:
               
chr10:28152471-28152619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
26-184
               

               
Cow position:
               
chr10:48317049-48317204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
26-191
               

               
Cow position:
               
chr10:23576452-23576287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
26-192
               

               
Cow position:
               
chr10:52029532-52029365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 75
               

               
Conread position:
               
26-194
               

               
Cow position:
               
chr10:24561078-24561248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
26-205
               

               
Cow position:
               
chr10:24132911-24133093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
26-213
               

               
Cow position:
               
chr10:53248101-53248289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
26-214
               

               
Cow position:
               
chr10:43438783-43438588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
26-215
               

               
Cow position:
               
chr10:20505448-20505259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr10:54730928-54730725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr10:33867481-33867664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
26-222
               

               
Cow position:
               
chr10:49169144-49169346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr10:14975887-14976084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr10:37235641-37235842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr10:37529357-37529560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr10:38014274-38014082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr10:58935283-58935480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr10:23056170-23056372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 54
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr10:35857146-35857346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr10:34662420-34662628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr10:58557105-58556895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
99, 125
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr10:35767173-35767383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
162, 97
               

               
Conread position:
               
26-237
               

               
Cow position:
               
chr10:51696651-51696450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
160, 51
               

               
Conread position:
               
26-238
               

               
Cow position:
               
chr10:13586617-13586400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
26-242
               

               
Cow position:
               
chr10:48741250-48741469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
26-244
               

               
Cow position:
               
chr10:52278639-52278409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:1488748-1488534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
162, 43
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:4311098-4310878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
64, 203
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:10134893-10134664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:21462147-21461928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 115
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:31791349-31791570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
92, 210
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:32503357-32503138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 94
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:33215709-33215484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:34661405-34661632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:36002107-36001893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 51
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:37528696-37528920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 104
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:37708304-37708528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 201
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:37818648-37818872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 53
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:38274349-38274131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:46195695-46195484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
31, 57
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:48462429-48462653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
162, 193
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:56475375-56475156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
26-245
               

               
Cow position:
               
chr10:61839504-61839288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
162, 54
               

               
Conread position:
               
26-246
               

               
Cow position:
               
chr10:52046772-52046552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 19
               

               
Conread position:
               
27-172
               

               
Cow position:
               
chr10:25882330-25882189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr10:20997368-20997533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
27-192
               

               
Cow position:
               
chr10:50183141-50183304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr10:39646195-39646384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
27-212
               

               
Cow position:
               
chr10:65000203-65000394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
27-213
               

               
Cow position:
               
chr10:35901237-35901055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
27-219
               

               
Cow position:
               
chr10:37444312-37444503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chr10:668790-668591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr10:13765257-13765454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
161, 52
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr10:27749586-27749384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
101, 93
               

               
Conread position:
               
27-233
               

               
Cow position:
               
chr10:31362300-31362510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 50
               

               
Conread position:
               
27-238
               

               
Cow position:
               
chr10:5847595-5847809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
27-240
               

               
Cow position:
               
chr10:1423748-1423524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
27-244
               

               
Cow position:
               
chr10:39268507-39268291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 193
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr10:33002334-33002552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr10:34906620-34906396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
51, 77
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr10:53907810-53908023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr10:64961213-64960991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
74, 209
               

               
Conread position:
               
27-245
               

               
Cow position:
               
chr10:65755046-65755271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr10:11217522-11217299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr10:22616730-22616957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr10:44783253-44783027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr10:47159013-47158792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
27-246
               

               
Cow position:
               
chr10:59247358-59247126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
29-245
               

               
Cow position:
               
chr10:24732219-24732001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
29-245
               

               
Cow position:
               
chr10:55733694-55733912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
30-189
               

               
Cow position:
               
chr10:29588930-29589095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
30-217
               

               
Cow position:
               
chr10:53084076-53083880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
30-224
               

               
Cow position:
               
chr10:34175089-34175288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
30-229
               

               
Cow position:
               
chr10:64285891-64286092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
30-239
               

               
Cow position:
               
chr10:29166190-29165969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
30-242
               

               
Cow position:
               
chr10:33067660-33067895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
30-243
               

               
Cow position:
               
chr10:60960845-60960625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr10:1719620-1719849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr10:8093410-8093630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr10:19372433-19372640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr10:24022373-24022589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 47
               

               
Conread position:
               
30-245
               

               
Cow position:
               
chr10:54848681-54848465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
30-246
               

               
Cow position:
               
chr10:38942335-38942121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
31-193
               

               
Cow position:
               
chr10:23500306-23500474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr10:32093707-32093523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
31-241
               

               
Cow position:
               
chr10:2708284-2708083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 140
               

               
Conread position:
               
31-243
               

               
Cow position:
               
chr10:14098417-14098632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
31-243
               

               
Cow position:
               
chr10:53973751-53973538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
31-243
               

               
Cow position:
               
chr10:60936849-60936642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
157, 63
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr10:1749485-1749264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr10:24871069-24870852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr10:25509605-25509386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr10:34430315-34430525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
157, 85
               

               
Conread position:
               
31-245
               

               
Cow position:
               
chr10:50359826-50359600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr10:6852175-6851958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
155, 38
               

               
Conread position:
               
31-246
               

               
Cow position:
               
chr10:22472223-22471999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
32-245
               

               
Cow position:
               
chr10:35904921-35905143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
32-245
               

               
Cow position:
               
chr10:39875243-39875448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
33-197
               

               
Cow position:
               
chr10:35715807-35715975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
33-214
               

               
Cow position:
               
chr10:61305183-61305000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
33-219
               

               
Cow position:
               
chr10:15871970-15872149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
33-223
               

               
Cow position:
               
chr10:6642787-6642590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
33-224
               

               
Cow position:
               
chr10:23936386-23936192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
33-224
               

               
Cow position:
               
chr10:37668256-37668447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
33-233
               

               
Cow position:
               
chr10:50016103-50016293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
155, 68
               

               
Conread position:
               
33-240
               

               
Cow position:
               
chr10:67443204-67443413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
33-245
               

               
Cow position:
               
chr10:42637128-42636918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
34-216
               

               
Cow position:
               
chr10:49456185-49456358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
34-224
               

               
Cow position:
               
chr10:2849257-2849061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
35-220
               

               
Cow position:
               
chr10:54799517-54799330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 86
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr10:5113490-5113276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
92, 163
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr10:6516282-6516497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
85, 192
               

               
Conread position:
               
35-245
               

               
Cow position:
               
chr10:63239522-63239307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
59, 91
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr10:45113903-45113691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
35-246
               

               
Cow position:
               
chr10:49846675-49846462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
37-246
               

               
Cow position:
               
chr10:40420943-40421159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
39-197
               

               
Cow position:
               
chr10:44771557-44771391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
39-207
               

               
Cow position:
               
chr10:11080857-11080683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
39-244
               

               
Cow position:
               
chr10:40270498-40270302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
39-245
               

               
Cow position:
               
chr10:42230556-42230344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
39-245
               

               
Cow position:
               
chr10:48127938-48127727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
41-243
               

               
Cow position:
               
chr10:59588273-59588483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr10:54141786-54141577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
41-246
               

               
Cow position:
               
chr10:37014530-37014325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
147, 122
               

               
Conread position:
               
48-246
               

               
Cow position:
               
chr10:20294775-20294980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
52-224
               

               
Cow position:
               
chr10:15293158-15292980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
54-246
               

               
Cow position:
               
chr10:4711514-4711317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
55-228
               

               
Cow position:
               
chr10:40933560-40933381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
57-245
               

               
Cow position:
               
chr10:42232914-42232727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
126, 69
               

               
Conread position:
               
67-245
               

               
Cow position:
               
chr10:25259897-25259716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
73-244
               

               
Cow position:
               
chr10:26580638-26580814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
80-212
               

               
Cow position:
               
chr10:41916821-41916954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
80-222
               

               
Cow position:
               
chr10:69216063-69215925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
86-233
               

               
Cow position:
               
chr10:33573349-33573504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               
Show alignments to all cow chromosomes.