Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-192
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 19

Conread position: 1-207
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 77, 23

Conread position: 1-215
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 22

Conread position: 1-216
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 75, 17

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 20

Conread position: 1-221
Cow position:
Alignm length: 228
Alignm identity: 163
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 20

Conread position: 1-224
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 126, 20

Conread position: 1-233
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 19

Conread position: 1-235
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 105, 8

Conread position: 1-242
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 105, 20

Conread position: 1-245
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 19

Conread position: 1-246
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 22

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 22

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 78, 22

Conread position: 2-224
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 19

Conread position: 9-246
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 90, 17

Conread position: 12-223
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 80, 31

Conread position: 14-245
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 25, 41

Conread position: 20-243
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 107, 57

Conread position: 21-208
Cow position:
Alignm length: 196
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 109, 0

Conread position: 22-224
Cow position:
Alignm length: 206
Alignm identity: 155
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 171, 0

Conread position: 22-243
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 172, 62

Conread position: 24-210
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 42

Conread position: 24-219
Cow position:
Alignm length: 206
Alignm identity: 153
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 50, 174

Conread position: 24-223
Cow position:
Alignm length: 207
Alignm identity: 157
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 24-226
Cow position:
Alignm length: 212
Alignm identity: 167
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 0

Conread position: 24-235
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 103, 190

Conread position: 24-246
Cow position:
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 90

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 172
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 50, 85

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 51, 213

Conread position: 26-155
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 26-157
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 26-174
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 40

Conread position: 26-181
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 71

Conread position: 26-183
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 44

Conread position: 26-183
Cow position:
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 26-209
Cow position:
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 94, 186

Conread position: 26-215
Cow position:
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 101, 43

Conread position: 26-219
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 157, 19

Conread position: 26-221
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 101, 51

Conread position: 26-229
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 157, 51

Conread position: 26-233
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 84, 22

Conread position: 26-244
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 51

Conread position: 26-245
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 51

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 180

Conread position: 26-246
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 123

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 51

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 53

Conread position: 27-205
Cow position:
Alignm length: 187
Alignm identity: 148
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 14

Conread position: 27-208
Cow position:
Alignm length: 189
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 27-212
Cow position:
Alignm length: 193
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 69, 50

Conread position: 27-233
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 0

Conread position: 27-245
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 199, 43

Conread position: 27-246
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 50

Conread position: 30-209
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 160

Conread position: 30-211
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 158, 47

Conread position: 30-214
Cow position:
Alignm length: 194
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 30-236
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 47

Conread position: 30-245
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 75, 37

Conread position: 31-195
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 46

Conread position: 31-236
Cow position:
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 31-244
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 157, 38

Conread position: 31-245
Cow position:
Alignm length: 224
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 40, 130

Conread position: 31-246
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 157, 95

Conread position: 31-246
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 43, 0

Conread position: 33-205
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 44

Conread position: 33-224
Cow position:
Alignm length: 195
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 34-243
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 35-221
Cow position:
Alignm length: 195
Alignm identity: 152
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 35-242
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 58, 201

Conread position: 35-246
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 44

Conread position: 35-246
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 36-246
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 32

Conread position: 41-192
Cow position:
Alignm length: 154
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 41-244
Cow position:
Alignm length: 207
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 147, 36

Conread position: 41-244
Cow position:
Alignm length: 218
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 30, 0

Conread position: 41-245
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 60

Conread position: 43-224
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 52-246
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 139

Conread position: 62-246
Cow position:
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 47

Show alignments to all cow chromosomes.