Cow genome map
| Conread name: | rssp11_a9.y1 |
| Conread position: | 1-174 |
| Cow position: | chr13:24230241-24230413 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 1-178 |
| Cow position: | chr13:37592912-37592734 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 1-182 |
| Cow position: | chr13:13338889-13339072 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 20 |
| Conread position: | 1-184 |
| Cow position: | chr13:51015155-51014970 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 1-189 |
| Cow position: | chr13:53195259-53195077 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 74, 8 |
| Conread position: | 1-196 |
| Cow position: | chr13:11955082-11954889 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 67 |
| Conread position: | 1-203 |
| Cow position: | chr13:54093776-54093972 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-207 |
| Cow position: | chr13:34556305-34556096 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 73, 20 |
| Conread position: | 1-208 |
| Cow position: | chr13:25547554-25547356 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 186, 22 |
| Conread position: | 1-211 |
| Cow position: | chr13:20041935-20041717 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 1-212 |
| Cow position: | chr13:10924881-10924665 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 1-215 |
| Cow position: | chr13:16024622-16024832 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 95, 20 |
| Conread position: | 1-223 |
| Cow position: | chr13:3315646-3315421 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 124, 20 |
| Conread position: | 1-223 |
| Cow position: | chr13:21904695-21904911 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 1-223 |
| Cow position: | chr13:48251954-48251740 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 72, 20 |
| Conread position: | 1-224 |
| Cow position: | chr13:20649952-20649734 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 1-233 |
| Cow position: | chr13:22115737-22115967 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 1-233 |
| Cow position: | chr13:24155573-24155804 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-237 |
| Cow position: | chr13:18166765-18166996 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 186, 17 |
| Conread position: | 1-245 |
| Cow position: | chr13:15869154-15869391 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 1-245 |
| Cow position: | chr13:60974114-60974349 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-246 |
| Cow position: | chr13:12546879-12546632 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 1-246 |
| Cow position: | chr13:20378304-20378066 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 1-246 |
| Cow position: | chr13:30651209-30651450 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 7 |
| Conread position: | 1-246 |
| Cow position: | chr13:32017494-32017248 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 20 |
| Conread position: | 1-246 |
| Cow position: | chr13:36771388-36771147 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 187, 22 |
| Conread position: | 1-246 |
| Cow position: | chr13:37381833-37382086 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 1-246 |
| Cow position: | chr13:60690695-60690444 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 20 |
| Conread position: | 2-161 |
| Cow position: | chr13:2404772-2404930 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 118, 18 |
| Conread position: | 2-244 |
| Cow position: | chr13:19178307-19178546 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 10-240 |
| Cow position: | chr13:38278098-38277868 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 178, 67 |
| Conread position: | 13-170 |
| Cow position: | chr13:56431859-56431709 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 13-231 |
| Cow position: | chr13:24715284-24715493 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 16-243 |
| Cow position: | chr13:12670402-12670173 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 102, 15 |
| Conread position: | 19-186 |
| Cow position: | chr13:60340853-60341026 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 20-245 |
| Cow position: | chr13:6086855-6086627 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 20-245 |
| Cow position: | chr13:42839493-42839265 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 63 |
| Conread position: | 21-245 |
| Cow position: | chr13:3003489-3003718 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 57, 218 |
| Conread position: | 21-246 |
| Cow position: | chr13:42860524-42860298 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 55 |
| Conread position: | 24-144 |
| Cow position: | chr13:7790066-7790184 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 24-186 |
| Cow position: | chr13:52228052-52227888 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 24-205 |
| Cow position: | chr13:20536551-20536733 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 24-218 |
| Cow position: | chr13:60599890-60599695 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 84 |
| Conread position: | 24-219 |
| Cow position: | chr13:12614306-12614508 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 24-222 |
| Cow position: | chr13:54418280-54418483 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-231 |
| Cow position: | chr13:39948366-39948159 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 164, 53 |
| Conread position: | 24-232 |
| Cow position: | chr13:54381886-54381674 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-240 |
| Cow position: | chr13:15446093-15446315 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 24-244 |
| Cow position: | chr13:33875717-33875935 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 52 |
| Conread position: | 24-245 |
| Cow position: | chr13:16269974-16270209 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 45, 141 |
| Conread position: | 24-245 |
| Cow position: | chr13:20563046-20563272 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 24-245 |
| Cow position: | chr13:20682995-20683220 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 55, 110 |
| Conread position: | 24-245 |
| Cow position: | chr13:40651985-40652207 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 27 |
| Conread position: | 24-246 |
| Cow position: | chr13:2884100-2884325 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 39 |
| Conread position: | 24-246 |
| Cow position: | chr13:13306146-13306381 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 24-246 |
| Cow position: | chr13:17613394-17613621 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 24-246 |
| Cow position: | chr13:34375318-34375530 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 50, 116 |
| Conread position: | 24-246 |
| Cow position: | chr13:43139176-43138954 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 73 |
| Conread position: | 24-246 |
| Cow position: | chr13:46324737-46324514 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 25-224 |
| Cow position: | chr13:33517871-33517671 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 53 |
| Conread position: | 25-245 |
| Cow position: | chr13:45353095-45353316 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 25-246 |
| Cow position: | chr13:16292593-16292818 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 42, 213 |
| Conread position: | 26-166 |
| Cow position: | chr13:5079171-5079033 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 26-192 |
| Cow position: | chr13:6975740-6975572 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 85, 51 |
| Conread position: | 26-192 |
| Cow position: | chr13:15192837-15192676 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-195 |
| Cow position: | chr13:18491655-18491815 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 26-195 |
| Cow position: | chr13:48944723-48944885 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 72 |
| Conread position: | 26-211 |
| Cow position: | chr13:2339487-2339669 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 26-216 |
| Cow position: | chr13:15621867-15622052 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-217 |
| Cow position: | chr13:46181844-46182029 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 159, 59 |
| Conread position: | 26-219 |
| Cow position: | chr13:23960760-23960558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 94, 51 |
| Conread position: | 26-219 |
| Cow position: | chr13:40722655-40722462 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 162, 50 |
| Conread position: | 26-221 |
| Cow position: | chr13:25261757-25261557 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 26-229 |
| Cow position: | chr13:17970975-17970776 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 26-236 |
| Cow position: | chr13:20863961-20863756 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 26-238 |
| Cow position: | chr13:55295570-55295359 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 26-242 |
| Cow position: | chr13:1042913-1042685 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 26-244 |
| Cow position: | chr13:18172391-18172599 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 26-245 |
| Cow position: | chr13:311483-311706 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 162, 53 |
| Conread position: | 26-245 |
| Cow position: | chr13:6153730-6153505 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 26-245 |
| Cow position: | chr13:6974213-6974439 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 45, 82 |
| Conread position: | 26-245 |
| Cow position: | chr13:7663371-7663155 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 158, 51 |
| Conread position: | 26-245 |
| Cow position: | chr13:20820783-20820564 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 162, 54 |
| Conread position: | 26-245 |
| Cow position: | chr13:23270159-23269939 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 26-245 |
| Cow position: | chr13:25695718-25695494 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 26-245 |
| Cow position: | chr13:27525212-27524988 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 26-245 |
| Cow position: | chr13:37484221-37483996 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 53 |
| Conread position: | 26-245 |
| Cow position: | chr13:37947950-37947741 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 26-245 |
| Cow position: | chr13:51821837-51821614 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 154, 53 |
| Conread position: | 26-245 |
| Cow position: | chr13:51940789-51941003 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 167, 51 |
| Conread position: | 26-245 |
| Cow position: | chr13:52585969-52585749 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 45, 41 |
| Conread position: | 26-246 |
| Cow position: | chr13:15740116-15740338 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 26-246 |
| Cow position: | chr13:25249104-25248869 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 51, 167 |
| Conread position: | 26-246 |
| Cow position: | chr13:60430022-60429804 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 83 |
| Conread position: | 27-159 |
| Cow position: | chr13:47186278-47186409 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 27-178 |
| Cow position: | chr13:19223699-19223853 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 43 |
| Conread position: | 27-182 |
| Cow position: | chr13:11147356-11147514 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 27-223 |
| Cow position: | chr13:16343740-16343938 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 27-224 |
| Cow position: | chr13:26261745-26261541 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 27-227 |
| Cow position: | chr13:52894195-52894398 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 42, 84 |
| Conread position: | 27-241 |
| Cow position: | chr13:16247711-16247922 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 161, 68 |
| Conread position: | 27-243 |
| Cow position: | chr13:12448941-12448716 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 20, 154 |
| Conread position: | 27-245 |
| Cow position: | chr13:152008-152216 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 27-245 |
| Cow position: | chr13:6759740-6759516 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 27-245 |
| Cow position: | chr13:6945421-6945647 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 27-245 |
| Cow position: | chr13:14717282-14717063 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 27-245 |
| Cow position: | chr13:24539545-24539766 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 27-245 |
| Cow position: | chr13:37517083-37516860 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 27-245 |
| Cow position: | chr13:45725949-45726153 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 161, 72 |
| Conread position: | 27-246 |
| Cow position: | chr13:3701492-3701707 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 161, 50 |
| Conread position: | 27-246 |
| Cow position: | chr13:9906787-9907011 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 27-246 |
| Cow position: | chr13:34035413-34035643 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 30-171 |
| Cow position: | chr13:8652382-8652240 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 57 |
| Conread position: | 30-194 |
| Cow position: | chr13:22025652-22025481 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 126, 47 |
| Conread position: | 30-215 |
| Cow position: | chr13:9587532-9587340 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 30-216 |
| Cow position: | chr13:53566652-53566841 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 99, 49 |
| Conread position: | 30-219 |
| Cow position: | chr13:23167040-23166849 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 30-220 |
| Cow position: | chr13:15974669-15974859 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 30-238 |
| Cow position: | chr13:43762226-43762440 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 158, 49 |
| Conread position: | 30-245 |
| Cow position: | chr13:38561998-38562218 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 148 |
| Conread position: | 31-208 |
| Cow position: | chr13:20531091-20530905 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 31-220 |
| Cow position: | chr13:44322958-44323152 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 31-236 |
| Cow position: | chr13:44626426-44626645 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 31-240 |
| Cow position: | chr13:15162600-15162400 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 31-241 |
| Cow position: | chr13:18243919-18244125 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 40, 73 |
| Conread position: | 31-243 |
| Cow position: | chr13:4552859-4553071 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 40, 117 |
| Conread position: | 31-244 |
| Cow position: | chr13:46525388-46525171 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 31-245 |
| Cow position: | chr13:20893580-20893368 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 157, 74 |
| Conread position: | 31-246 |
| Cow position: | chr13:21155435-21155216 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 31-246 |
| Cow position: | chr13:32949953-32949731 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 12, 211 |
| Conread position: | 32-245 |
| Cow position: | chr13:16014868-16015089 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 33-208 |
| Cow position: | chr13:43869053-43868883 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 33-219 |
| Cow position: | chr13:37985699-37985503 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 33-223 |
| Cow position: | chr13:9975016-9974817 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 33-246 |
| Cow position: | chr13:1011385-1011607 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 33-246 |
| Cow position: | chr13:8362696-8362471 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 35-173 |
| Cow position: | chr13:23512428-23512558 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 35-184 |
| Cow position: | chr13:33054334-33054185 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 124 |
| Conread position: | 35-211 |
| Cow position: | chr13:13176713-13176889 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 35-219 |
| Cow position: | chr13:33900851-33900677 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 36-246 |
| Cow position: | chr13:19138500-19138712 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 149, 76 |
| Conread position: | 37-192 |
| Cow position: | chr13:5263224-5263068 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 38-213 |
| Cow position: | chr13:7076322-7076498 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 39-219 |
| Cow position: | chr13:56148602-56148787 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 66, 141 |
| Conread position: | 39-219 |
| Cow position: | chr13:56160365-56160180 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 81, 141 |
| Conread position: | 39-245 |
| Cow position: | chr13:6079353-6079145 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 41-207 |
| Cow position: | chr13:23667324-23667498 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 41-225 |
| Cow position: | chr13:20784656-20784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 147, 38 |
| Conread position: | 41-245 |
| Cow position: | chr13:20879765-20879563 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 41-246 |
| Cow position: | chr13:27017315-27017114 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 191, 68 |
| Conread position: | 46-185 |
| Cow position: | chr13:13465716-13465579 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 51-244 |
| Cow position: | chr13:60966839-60967037 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 28, 81 |
| Conread position: | 53-194 |
| Cow position: | chr13:4464082-4464228 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 53-224 |
| Cow position: | chr13:33352285-33352114 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 53-246 |
| Cow position: | chr13:45604343-45604137 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 54-192 |
| Cow position: | chr13:17745320-17745457 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 56-245 |
| Cow position: | chr13:41359833-41360025 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 57-245 |
| Cow position: | chr13:34052518-34052328 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 62-245 |
| Cow position: | chr13:11290731-11290542 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 16 |
| Conread position: | 78-239 |
| Cow position: | chr13:46329363-46329196 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.