Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-181
Cow position:
Alignm length: 183
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 20

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 126, 20

Conread position: 1-192
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 126, 22

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 1-192
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 8

Conread position: 1-216
Cow position:
Alignm length: 220
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 22

Conread position: 1-219
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 175, 20

Conread position: 1-221
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 20

Conread position: 1-223
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 17

Conread position: 1-223
Cow position:
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 20

Conread position: 1-224
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 20

Conread position: 1-233
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 70, 20

Conread position: 1-233
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 20

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 20

Conread position: 1-244
Cow position:
Alignm length: 257
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 20

Conread position: 1-245
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 20

Conread position: 1-246
Cow position:
Alignm length: 253
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 1-246
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 101, 22

Conread position: 1-246
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 112, 20

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 187
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 70, 24

Conread position: 1-246
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 19

Conread position: 1-246
Cow position:
Alignm length: 254
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 19

Conread position: 1-246
Cow position:
Alignm length: 253
Alignm identity: 184
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 21

Conread position: 2-145
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 2-211
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 188, 19

Conread position: 3-192
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 115, 20

Conread position: 4-246
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 18

Conread position: 13-206
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 14

Conread position: 14-245
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 199, 63

Conread position: 20-246
Cow position:
Alignm length: 237
Alignm identity: 179
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 24-169
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 95

Conread position: 24-192
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 169

Conread position: 24-192
Cow position:
Alignm length: 171
Alignm identity: 138
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 0

Conread position: 24-215
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 164, 102

Conread position: 24-236
Cow position:
Alignm length: 216
Alignm identity: 151
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 73

Conread position: 24-243
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 108, 53

Conread position: 24-244
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 145

Conread position: 24-245
Cow position:
Alignm length: 227
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 24-245
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 51, 0

Conread position: 24-246
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 103

Conread position: 24-246
Cow position:
Alignm length: 231
Alignm identity: 177
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 131

Conread position: 24-246
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 24-246
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 24-246
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 50, 158

Conread position: 25-239
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 112, 41

Conread position: 26-166
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 26-174
Cow position:
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 53

Conread position: 26-175
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 51

Conread position: 26-181
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 141

Conread position: 26-186
Cow position:
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 26-191
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 140, 53

Conread position: 26-208
Cow position:
Alignm length: 185
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 162, 52

Conread position: 26-209
Cow position:
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 130, 86

Conread position: 26-211
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 162, 51

Conread position: 26-213
Cow position:
Alignm length: 196
Alignm identity: 151
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 85, 0

Conread position: 26-215
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 51

Conread position: 26-216
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 26-223
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 66

Conread position: 26-223
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 160, 51

Conread position: 26-224
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 54

Conread position: 26-224
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 51

Conread position: 26-235
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 162, 52

Conread position: 26-237
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 131

Conread position: 26-239
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 82

Conread position: 26-241
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 106, 79

Conread position: 26-242
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 80, 131

Conread position: 26-243
Cow position:
Alignm length: 221
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 57

Conread position: 26-244
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 42, 52

Conread position: 26-245
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 141

Conread position: 26-245
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 163, 44

Conread position: 26-245
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 45

Conread position: 26-245
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 45, 86

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 51

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 162, 16

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 162, 51

Conread position: 27-173
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 27-219
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 51

Conread position: 27-237
Cow position:
Alignm length: 216
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 159, 49

Conread position: 27-242
Cow position:
Alignm length: 219
Alignm identity: 170
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 161, 42

Conread position: 27-243
Cow position:
Alignm length: 229
Alignm identity: 177
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 50

Conread position: 27-245
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 108, 43

Conread position: 27-246
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 42, 17

Conread position: 27-246
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 100, 207

Conread position: 27-246
Cow position:
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 27-246
Cow position:
Alignm length: 228
Alignm identity: 174
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 28-246
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 153

Conread position: 30-171
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 30-192
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 97, 49

Conread position: 30-192
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 30-211
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 155, 104

Conread position: 30-219
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 36

Conread position: 30-244
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 25, 83

Conread position: 30-245
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 41, 98

Conread position: 30-246
Cow position:
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 97

Conread position: 30-246
Cow position:
Alignm length: 229
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 82, 57

Conread position: 31-220
Cow position:
Alignm length: 196
Alignm identity: 152
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 31-225
Cow position:
Alignm length: 198
Alignm identity: 154
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 157, 89

Conread position: 31-233
Cow position:
Alignm length: 206
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 157, 53

Conread position: 31-242
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 87, 48

Conread position: 31-244
Cow position:
Alignm length: 222
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 95, 126

Conread position: 31-245
Cow position:
Alignm length: 222
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 51

Conread position: 31-245
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 101

Conread position: 31-246
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 42, 86

Conread position: 32-246
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 156, 74

Conread position: 33-196
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 44

Conread position: 33-245
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 44, 196

Conread position: 33-246
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 33-246
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 38, 98

Conread position: 34-246
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 35-224
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 152, 66

Conread position: 35-225
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 35-235
Cow position:
Alignm length: 208
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 44

Conread position: 35-245
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 105

Conread position: 39-205
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 60

Conread position: 41-232
Cow position:
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 41-244
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 42-245
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 43-215
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 145, 83

Conread position: 43-245
Cow position:
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 63, 0

Conread position: 47-245
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 56-246
Cow position:
Alignm length: 193
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 130, 24

Conread position: 58-200
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 21

Conread position: 59-245
Cow position:
Alignm length: 190
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 129, 57

Conread position: 62-245
Cow position:
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 16

Conread position: 71-226
Cow position:
Alignm length: 156
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 71-233
Cow position:
Alignm length: 167
Alignm identity: 139
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 37, 99

Conread position: 72-245
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 142

Conread position: 90-245
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 98, 75

Show alignments to all cow chromosomes.