Cow genome map

Conread name: rssp11_a9.y1

Conread position: 1-167
Cow position:
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 68, 20

Conread position: 1-184
Cow position:
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 20

Conread position: 1-192
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 1-202
Cow position:
Alignm length: 209
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 125, 23

Conread position: 1-205
Cow position:
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 126, 20

Conread position: 1-218
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 70, 20

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 174, 8

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 187, 20

Conread position: 1-223
Cow position:
Alignm length: 231
Alignm identity: 179
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 119, 20

Conread position: 1-230
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 20

Conread position: 1-236
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 187, 22

Conread position: 1-236
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 70, 22

Conread position: 1-245
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 20

Conread position: 1-245
Cow position:
Alignm length: 257
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 20

Conread position: 1-246
Cow position:
Alignm length: 251
Alignm identity: 184
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 73, 20

Conread position: 1-246
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 93, 8

Conread position: 1-246
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 186, 20

Conread position: 2-175
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 7

Conread position: 2-245
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 171, 19

Conread position: 6-245
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 182, 17

Conread position: 10-237
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 77, 101

Conread position: 13-243
Cow position:
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 14

Conread position: 20-225
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 0

Conread position: 21-216
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 78

Conread position: 21-246
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 160

Conread position: 22-246
Cow position:
Alignm length: 231
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 7

Conread position: 22-246
Cow position:
Alignm length: 231
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 23-246
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 11, 85

Conread position: 24-176
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 149

Conread position: 24-192
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 24-207
Cow position:
Alignm length: 190
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 0

Conread position: 24-213
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 24-215
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 78

Conread position: 24-215
Cow position:
Alignm length: 196
Alignm identity: 158
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 55, 0

Conread position: 24-224
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 134

Conread position: 24-230
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 60

Conread position: 24-233
Cow position:
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 24-235
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 80

Conread position: 24-237
Cow position:
Alignm length: 217
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 164, 85

Conread position: 24-242
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 39, 126

Conread position: 24-243
Cow position:
Alignm length: 230
Alignm identity: 171
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 50, 145

Conread position: 24-244
Cow position:
Alignm length: 224
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 53

Conread position: 24-245
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 218

Conread position: 24-245
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 50, 79

Conread position: 24-245
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 19, 167

Conread position: 24-245
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 47, 7

Conread position: 24-245
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 24-246
Cow position:
Alignm length: 232
Alignm identity: 180
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 73

Conread position: 24-246
Cow position:
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 25-245
Cow position:
Alignm length: 230
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 49, 146

Conread position: 25-246
Cow position:
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 83

Conread position: 26-186
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 109, 103

Conread position: 26-204
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 26-214
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 26-215
Cow position:
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 162, 73

Conread position: 26-215
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 26-223
Cow position:
Alignm length: 202
Alignm identity: 156
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 96, 51

Conread position: 26-223
Cow position:
Alignm length: 199
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 164, 97

Conread position: 26-223
Cow position:
Alignm length: 202
Alignm identity: 160
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 49, 99

Conread position: 26-223
Cow position:
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 45, 61

Conread position: 26-229
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 45, 75

Conread position: 26-239
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 26-240
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 51

Conread position: 26-241
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 43

Conread position: 26-245
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 92, 51

Conread position: 26-245
Cow position:
Alignm length: 222
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 54

Conread position: 26-245
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 158, 53

Conread position: 26-245
Cow position:
Alignm length: 227
Alignm identity: 179
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 51

Conread position: 26-245
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 229
Alignm identity: 169
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 162, 51

Conread position: 26-245
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 144, 94

Conread position: 26-246
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 49, 175

Conread position: 26-246
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 71

Conread position: 26-246
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 42, 90

Conread position: 27-170
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 27-223
Cow position:
Alignm length: 203
Alignm identity: 147
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 59, 69

Conread position: 27-224
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 94

Conread position: 27-231
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 157, 79

Conread position: 27-233
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 27-242
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 50

Conread position: 27-243
Cow position:
Alignm length: 220
Alignm identity: 167
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 84, 79

Conread position: 27-243
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 42

Conread position: 27-245
Cow position:
Alignm length: 227
Alignm identity: 172
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 124

Conread position: 27-246
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 47, 126

Conread position: 27-246
Cow position:
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 120

Conread position: 27-246
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 103, 74

Conread position: 30-158
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 30-171
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 40

Conread position: 30-186
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 72

Conread position: 30-192
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 30-192
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 30-197
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 158, 49

Conread position: 30-207
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 158, 39

Conread position: 30-211
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 158, 56

Conread position: 30-217
Cow position:
Alignm length: 191
Alignm identity: 150
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 158, 40

Conread position: 30-218
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 88, 25

Conread position: 30-230
Cow position:
Alignm length: 211
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 45, 206

Conread position: 30-246
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 39

Conread position: 31-169
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 31-233
Cow position:
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 70, 46

Conread position: 31-243
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 69

Conread position: 31-244
Cow position:
Alignm length: 222
Alignm identity: 173
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 0

Conread position: 31-246
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 156, 68

Conread position: 31-246
Cow position:
Alignm length: 221
Alignm identity: 163
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 94, 65

Conread position: 33-214
Cow position:
Alignm length: 189
Alignm identity: 148
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 33-240
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 33-246
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 40, 64

Conread position: 34-192
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 34-214
Cow position:
Alignm length: 186
Alignm identity: 153
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 12, 21

Conread position: 34-236
Cow position:
Alignm length: 205
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 154, 35

Conread position: 34-245
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 154, 75

Conread position: 34-245
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 154, 43

Conread position: 34-245
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 154, 67

Conread position: 35-224
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 149, 0

Conread position: 35-246
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 36-223
Cow position:
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 63

Conread position: 37-245
Cow position:
Alignm length: 215
Alignm identity: 166
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 92, 42

Conread position: 37-245
Cow position:
Alignm length: 217
Alignm identity: 162
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 153, 62

Conread position: 37-246
Cow position:
Alignm length: 215
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 193

Conread position: 38-215
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 150, 0

Conread position: 39-223
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 23, 42

Conread position: 39-243
Cow position:
Alignm length: 208
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 149, 38

Conread position: 41-219
Cow position:
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 37, 139

Conread position: 41-239
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 41-241
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 61

Conread position: 47-245
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 148

Conread position: 50-245
Cow position:
Alignm length: 200
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 14

Conread position: 53-243
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 26

Conread position: 58-229
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 67-237
Cow position:
Alignm length: 175
Alignm identity: 141
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 8, 58

Conread position: 68-246
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 118, 79

Conread position: 71-245
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 74

Conread position: 79-245
Cow position:
Alignm length: 171
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 49, 61

Conread position: 80-217
Cow position:
Alignm length: 141
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 114, 0

Show alignments to all cow chromosomes.