Cow genome map


           Conread name:
           rssp11_a9.y1
        

               Conread position:
               1-159
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               1-197
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               112, 20
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               184, 19
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 20
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               187, 29
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               187, 20
               

               Conread position:
               1-246
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               2-245
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               3-192
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               117, 18
               

               Conread position:
               9-186
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               10-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               178, 60
               

               Conread position:
               14-246
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               174, 95
               

               Conread position:
               15-233
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               174, 55
               

               Conread position:
               20-225
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               168, 57
               

               Conread position:
               20-246
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               21-219
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               22-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               53, 32
               

               Conread position:
               24-171
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 112
               

               Conread position:
               24-193
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               24-223
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               24-227
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 182
               

               Conread position:
               24-242
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               24-245
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               101, 56
               

               Conread position:
               24-246
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               50, 203
               

               Conread position:
               24-246
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               26-166
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               26-184
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               26-192
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               26-212
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               122, 53
               

               Conread position:
               26-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               26-217
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               26-219
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               26-223
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               26-233
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               26-236
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               26-243
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               162, 80
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               99, 41
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               92, 41
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               45, 78
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 96
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 81
               

               Conread position:
               26-245
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 51
               

               Conread position:
               26-246
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               26-246
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               26-246
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               27-177
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               27-223
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               161, 54
               

               Conread position:
               27-234
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               27-243
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               27-244
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               27-244
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               113, 50
               

               Conread position:
               27-246
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               27-246
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               27-246
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               44, 83
               

               Conread position:
               27-246
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               161, 82
               

               Conread position:
               29-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               30-223
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               41, 81
               

               Conread position:
               30-233
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               156, 45
               

               Conread position:
               30-239
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 66
               

               Conread position:
               30-245
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               30-245
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               30-246
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               143, 75
               

               Conread position:
               31-184
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               31-215
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               152, 77
               

               Conread position:
               31-241
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               31-244
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               81, 39
               

               Conread position:
               31-245
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               31-245
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               99, 49
               

               Conread position:
               31-246
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 66
               

               Conread position:
               33-215
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               34-219
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               37, 152
               

               Conread position:
               34-240
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               34-245
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               35-242
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 172
               

               Conread position:
               35-244
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               94, 47
               

               Conread position:
               36-245
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               39-178
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               39-223
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 92
               

               Conread position:
               39-245
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               39-246
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               149, 133
               

               Conread position:
               41-192
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               41-219
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               41-236
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               33, 151
               

               Conread position:
               41-245
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               41-245
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               67, 173
               

               Conread position:
               41-246
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               41-246
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               84, 67
               

               Conread position:
               47-245
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               132, 68
               

               Conread position:
               48-245
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               51-192
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               58-246
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               59-245
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               75, 131
               

               Conread position:
               62-246
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               65, 17
               
Show alignments to all cow chromosomes.